BQ623278

Overview
NameBQ623278
Unique NameBQ623278
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length704
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5158 contig Csv1_Contig5158:245..948. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623278 vs. ExPASy Swiss-Prot
Match: Y3288_ARATH (Probable inactive receptor kinase At3g02880 OS=Arabidopsis thaliana GN=At3g02880 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.516e-12
Identity = 42/115 (36.52%), Postives = 63/115 (54.78%), Query Frame = 3
Query:   36 GYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPT-DSADFGDNNLVGWVKQHAKLKI-SDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQAGSG 374
            GY  PE   + + S K DVYS+GV++LELLTGK PT    +    +L  WV+   + +  SDV DPEL +  P     +++ L +  +C    P  RP+M +V  + +E+   SG
Sbjct:  506 GYRAPEITDARKISQKADVYSFGVLILELLTGKSPTHQQLNEEGVDLPRWVQSVTEQQTPSDVLDPELTRYQPEGNENIIRLLKIGMSCTAQFPDSRPSMAEVTRLIEEVSHSSG 620          
BLAST of BQ623278 vs. ExPASy Swiss-Prot
Match: Y1124_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g12460 OS=Arabidopsis thaliana GN=At1g12460 PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.898e-12
Identity = 45/119 (37.82%), Postives = 68/119 (57.14%), Query Frame = 3
Query:   36 GYVPPEY-YQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKI-----SDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQAGSG 374
            GY+ PE   QS R S K DVYSYGVVLLEL+TG++P +S      N V  ++ + +  +     SD FD  L + + N   EL+Q + +   C  + P +RP+M +V+ + + I+ G G
Sbjct:  769 GYIAPELAQQSLRASEKCDVYSYGVVLLELVTGRKPVESP---SENQVLILRDYVRDLLETGSASDCFDRRLREFEEN---ELIQVMKLGLLCTSENPLKRPSMAEVVQVLESIRNGFG 881          
BLAST of BQ623278 vs. ExPASy Swiss-Prot
Match: ACCR4_ARATH (Serine/threonine-protein kinase-like protein CCR4 OS=Arabidopsis thaliana GN=CCR4 PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.898e-12
Identity = 48/124 (38.71%), Postives = 74/124 (59.68%), Query Frame = 3
Query:    3 HLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTG-KRPTDSADFGDNNLVGWVKQHAKL-KISDVFDPELMKEDPNIEIELLQHL-HVASACLDDRPWRRPTMIQVMAMFKEIQA 365
            HLS+   AGT GY+ PEYY+  + +TK DVYS+GVVLLELL+G K   ++ D    NLV +V  +  L +   + D  +    P  EIE + H+ ++A+ CL     +RP+M++V++  +   A
Sbjct:  613 HLSLHA-AGTLGYIDPEYYKFQQLTTKSDVYSFGVVLLELLSGHKAIHNNEDENPRNLVEYVVPYILLDEAHRILDQRIPPPTP-YEIEAVAHVGYLAAECLMPCSRKRPSMVEVVSKLESALA 734          
BLAST of BQ623278 vs. ExPASy Swiss-Prot
Match: Y5659_ARATH (Probable inactive receptor kinase At5g16590 OS=Arabidopsis thaliana GN=At5g16590 PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.703e-12
Identity = 41/110 (37.27%), Postives = 62/110 (56.36%), Query Frame = 3
Query:   36 GYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDN-NLVGWVKQHAKLKI-SDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEI 359
            GY  PE   + + S K DVYS+GV++LELLTGK PT      +  +L  WV    + +  SDVFDPEL +   +    +++ L++  +C    P  RPTM +V  + +E+
Sbjct:  504 GYRAPEVTDARKISQKADVYSFGVLILELLTGKSPTHQQLHEEGVDLPRWVSSITEQQSPSDVFDPELTRYQSDSNENMIRLLNIGISCTTQYPDSRPTMPEVTRLIEEV 613          
BLAST of BQ623278 vs. ExPASy Swiss-Prot
Match: Y5169_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g16900 OS=Arabidopsis thaliana GN=At5g16900 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.703e-12
Identity = 41/116 (35.34%), Postives = 66/116 (56.90%), Query Frame = 3
Query:   12 VST-LAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKE 356
            VST + GTPGY+ PEYY+++R + K DVYS+G+VLLE++T +   + A+   +          +  IS + DP L+ E  +  +   + L +A +C+D  P  RP M  V+   K+
Sbjct:  731 VSTGVVGTPGYLDPEYYRTYRLTEKSDVYSFGIVLLEIITNQPVLEQANENRHIAERVRTMLTRSDISTIVDPNLIGEYDSGSVR--KALKLAMSCVDPSPVARPDMSHVVQELKQ 844          
BLAST of BQ623278 vs. ExPASy Swiss-Prot
Match: WAKLR_ARATH (Wall-associated receptor kinase-like 21 OS=Arabidopsis thaliana GN=WAKL21 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.006e-11
Identity = 47/154 (30.52%), Postives = 80/154 (51.95%), Query Frame = 3
Query:    3 HLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTD-SADFGDNNLVGW-VKQHAKLKISDVFDPELMKE-DPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQAGSGLDSQSTIATDEGGFGTVEMVEMSIQEA 455
            H+S +   GTPGY+ P+Y+Q F+ S K DVYS+GVVL+E+++G +  D +  + + NL    V +  + ++ D+ DP L KE +P +   +     +A  CL      RPTM+++      I+            T+ G F     ++M  Q++
Sbjct:  471 HISTAP-QGTPGYLDPQYHQDFQLSDKSDVYSFGVVLVEIISGFKVIDFTRPYSEVNLASLAVDRIGRGRVVDIIDPCLNKEINPKMFASIHNLAELAFRCLSFHRNMRPTMVEITEDLHRIKL-------MHYGTESGKFKNRSEIDMKRQQS 616          
BLAST of BQ623278 vs. ExPASy Swiss-Prot
Match: SERK1_ARATH (Somatic embryogenesis receptor kinase 1 OS=Arabidopsis thaliana GN=SERK1 PE=1 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 1.006e-11
Identity = 45/125 (36.00%), Postives = 68/125 (54.40%), Query Frame = 3
Query:   15 STLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNN---LVGWVKQHAK-LKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQAGSGL 377
            + + GT G++ PEY  + + S K DV+ YG++LLEL+TG+R  D A   +++   L+ WVK   K  K+  + DP+L       E+E  Q + VA  C    P  RP M +V+ M +    G GL
Sbjct:  463 TAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEMLVDPDLQTNYEERELE--QVIQVALLCTQGSPMERPKMSEVVRMLE----GDGL 581          
BLAST of BQ623278 vs. ExPASy Swiss-Prot
Match: RPK1_IPONI (Receptor-like protein kinase OS=Ipomoea nil GN=INRPK1 PE=2 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 1.006e-11
Identity = 42/113 (37.17%), Postives = 66/113 (58.41%), Query Frame = 3
Query:   15 STLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQ--HAKLKISDVFDPELMKE--DPNIEIELLQHLHVASACLDDRPWRRPTMIQVM 341
            +T+ GT GY+ PE   +   S + DVYSYGVVLLEL+T K+  D +  G+ ++VGWV+       +I  + DP L+ E  D ++  ++ + L +A  C +    +RPTM  V+
Sbjct:  977 NTVQGTIGYMAPENAFTTVKSRESDVYSYGVVLLELITRKKALDPSFNGETDIVGWVRSVWTQTGEIQKIVDPSLLDELIDSSVMEQVTEALSLALRCAEKEVDKRPTMRDVV 1089          
BLAST of BQ623278 vs. ExPASy Swiss-Prot
Match: FEI2_ARATH (LRR receptor-like serine/threonine-protein kinase FEI 2 OS=Arabidopsis thaliana GN=FEI2 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.006e-11
Identity = 43/116 (37.07%), Postives = 68/116 (58.62%), Query Frame = 3
Query:   21 LAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDN-NLVGW----VKQHAKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFK 353
            +AGT GY+ PEY QS R + K DVYS+GV++LE+L+GK PTD++      N+VGW    + ++   +I D+    + +E       L   L +A+ C+   P  RPTM +V+ + +
Sbjct:  463 VAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKLPTDASFIEKGFNIVGWLNFLISENRAKEIVDLSCEGVERE------SLDALLSIATKCVSSSPDERPTMHRVVQLLE 572          
BLAST of BQ623278 vs. ExPASy Swiss-Prot
Match: APK1A_ARATH (Protein kinase APK1A, chloroplastic OS=Arabidopsis thaliana GN=APK1A PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.006e-11
Identity = 48/124 (38.71%), Postives = 67/124 (54.03%), Query Frame = 3
Query:    3 HLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTD-SADFGDNNLVGWVKQHA--KLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQA 365
            H+S   + GT GY  PEY  +   +TK DVYS+GVVLLELL+G+R  D +   G+ NLV W K +   K KI  V D  L  +D     E  +   ++  CL      RP M +V++  + IQ+
Sbjct:  235 HVSTRVM-GTHGYAAPEYLATGHLTTKSDVYSFGVVLLELLSGRRAVDKNRPSGERNLVEWAKPYLVNKRKIFRVIDNRL--QDQYSMEEACKVATLSLRCLTTEIKLRPNMSEVVSHLEHIQS 355          
The following BLAST results are available for this feature:
BLAST of BQ623278 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 80
Match NameE-valueIdentityDescription
Y3288_ARATH4.516e-1236.52Probable inactive receptor kinase At3g02880 OS=Ara... [more]
Y1124_ARATH5.898e-1237.82Probable LRR receptor-like serine/threonine-protei... [more]
ACCR4_ARATH5.898e-1238.71Serine/threonine-protein kinase-like protein CCR4 ... [more]
Y5659_ARATH7.703e-1237.27Probable inactive receptor kinase At5g16590 OS=Ara... [more]
Y5169_ARATH7.703e-1235.34Probable LRR receptor-like serine/threonine-protei... [more]
WAKLR_ARATH1.006e-1130.52Wall-associated receptor kinase-like 21 OS=Arabido... [more]
SERK1_ARATH1.006e-1136.00Somatic embryogenesis receptor kinase 1 OS=Arabido... [more]
RPK1_IPONI1.006e-1137.17Receptor-like protein kinase OS=Ipomoea nil GN=INR... [more]
FEI2_ARATH1.006e-1137.07LRR receptor-like serine/threonine-protein kinase ... [more]
APK1A_ARATH1.006e-1138.71Protein kinase APK1A, chloroplastic OS=Arabidopsis... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00369 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00369 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623278 ID=BQ623278; Name=BQ623278; organism=Citrus sinensis; type=EST; length=704bp
CACATTTGAGTGTCAGTACGCTAGCAGGCACACCCGGCTATGTCCCTCCC
GAATACTATCAAAGCTTTAGATGTTCGACGAAAGGCGATGTTTACAGTTA
TGGTGTAGTTTTGCTCGAGTTGCTAACGGGAAAAAGGCCAACAGATTCAG
CAGATTTCGGTGACAATAACCTAGTTGGGTGGGTAAAGCAGCATGCGAAG
CTGAAAATAAGCGATGTCTTTGATCCAGAACTCATGAAGGAGGATCCAAA
CATCGAGATTGAGCTTCTTCAACACTTGCATGTAGCGAGTGCTTGCCTGG
ATGATCGACCATGGAGGAGACCGACAATGATTCAGGTTATGGCAATGTTT
AAAGAAATCCAAGCCGGTTCAGGACTTGACTCGCAATCTACTATTGCCAC
TGATGAAGGAGGTTTCGGTACAGTCGAAATGGTAGAGATGAGCATCCAAG
AAGCTCCAGAACTAAGCACCAAGCCTTAAGCCATTCAATTTTCAGGACAA
GCATTCTTTCAGTGCCCCAAAATTTTCCCACTTGAAAACCAAAAAAGTTG
CCTTTGTATCTCTACCATTTAGTGTATGTAATCTTTGTATCCCTTTTGAA
AATTCTTGTTATTTATACATAAAAAAAAAAAAGTTGCTTTTAACTTTGTT
ATCGAATGTGTAAATATACAACCCCAAGTTTGTTATGCTATCTTGGTTCT
TTAA
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