BQ623278

Overview
NameBQ623278
Unique NameBQ623278
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length704
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5158 contig Csv1_Contig5158:245..948. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623278 vs. ExPASy Swiss-Prot
Match: WAKLP_ARATH (Wall-associated receptor kinase-like 15 OS=Arabidopsis thaliana GN=WAKL15 PE=2 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 1.314e-11
Identity = 54/121 (44.63%), Postives = 74/121 (61.16%), Query Frame = 3
Query:   12 VSTLA-GTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTD-SADFGDNNLVGWVKQHAKL-KISDVFDPELMKEDPNIEIELLQHLHV-ASACLDDRPWRRPTMIQVMAMFKEIQ 362
            V+T A GT GY+ PEYY +F+ + K DVYS+GVVL ELLT K+  D + +  D NLV +V++  K  ++ DV DP +       EIE ++ L V A  C+ +    RPTM QV A  KEI+
Sbjct:  516 VTTCAQGTLGYLDPEYYLNFQLTDKSDVYSFGVVLFELLTCKKAIDFNREEEDVNLVVFVRKALKEGRLMDVIDPVIGIGATEKEIESMKALGVLAELCVKETRQCRPTM-QVAA--KEIE 633          
BLAST of BQ623278 vs. ExPASy Swiss-Prot
Match: PEPR1_ARATH (Leucine-rich repeat receptor-like protein kinase PEPR1 OS=Arabidopsis thaliana GN=PEPR1 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.314e-11
Identity = 40/128 (31.25%), Postives = 69/128 (53.91%), Query Frame = 3
Query:    6 LSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVK-------QHAKLKISDVFDPELMKE--DPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQ 362
            +S +T+ GT GY+ PE         + DVYSYGVVLLEL+T KR  D +     ++V WV+        + +  ++ + DP L+ E  D ++  +++Q   +A +C    P  RPTM   + + ++++
Sbjct:  984 VSTATVTGTTGYIAPENAFKTVRGRESDVYSYGVVLLELVTRKRAVDKSFPESTDIVSWVRSALSSSNNNVEDMVTTIVDPILVDELLDSSLREQVMQVTELALSCTQQDPAMRPTMRDAVKLLEDVK 1111          
BLAST of BQ623278 vs. ExPASy Swiss-Prot
Match: APK2B_ARATH (Protein kinase 2B, chloroplastic OS=Arabidopsis thaliana GN=APK2B PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.314e-11
Identity = 50/148 (33.78%), Postives = 78/148 (52.70%), Query Frame = 3
Query:    3 HLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFG-DNNLVGWVKQHA--KLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQA---GSGL-DSQSTIATDEGGFGTV 425
            H+S   + GT GY  PEY  + R + K DVYS+GVVLLELL+G+R  D +  G + +LV W   +   K K+  + D  L  + P         L  A  CL+     RP M +V+A   ++++   G+G+ + Q+ I +  G  G++
Sbjct:  248 HVSTQVM-GTHGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRRAVDKSKVGMEQSLVDWATPYLGDKRKLFRIMDTRLGGQYPQKGAYTAASL--ALQCLNPDAKLRPKMSEVLAKLDQLESTKPGTGVGNRQAQIDSPRGSNGSI 392          
BLAST of BQ623278 vs. ExPASy Swiss-Prot
Match: Y5977_ARATH (Probable leucine-rich repeat receptor-like protein kinase At5g49770 OS=Arabidopsis thaliana GN=At5g49770 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.716e-11
Identity = 42/132 (31.82%), Postives = 70/132 (53.03%), Query Frame = 3
Query:   27 GTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKL-KISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQAGSGLDSQSTIATDEGGFG 419
            GT GY+ PEYY + + + K DVY +GVV+LELLTGK P D   +    +   + +   L  + ++ D  +++   N++    +++ VA  C++     RPTM +V+   + I    GL+  +  AT E   G
Sbjct:  797 GTMGYLDPEYYMTNQLTEKSDVYGFGVVMLELLTGKSPIDRGSYVVKEVKKKMDKSRNLYDLQELLDTTIIQNSGNLK-GFEKYVDVALQCVEPEGVNRPTMSEVVQELESILRLVGLNPNADSATYEEASG 927          
BLAST of BQ623278 vs. ExPASy Swiss-Prot
Match: Y4885_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g08850 OS=Arabidopsis thaliana GN=At4g08850 PE=1 SV=3)

HSP 1 Score: 69.707 bits (169), Expect = 1.716e-11
Identity = 40/112 (35.71%), Postives = 59/112 (52.68%), Query Frame = 3
Query:   15 STLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMF 350
            S +AGT GYV PE   + + + K DVYS+GV+ LE++ G+ P D       + +      A L +  + D  L +  P I+ E+L+ L VA  CL   P  RPTM+ +   F
Sbjct:  938 SAVAGTYGYVAPELAYAMKVTEKCDVYSFGVLTLEVIKGEHPGDLV-----STLSSSPPDATLSLKSISDHRLPEPTPEIKEEVLEILKVALLCLHSDPQARPTMLSISTAF 1044          
BLAST of BQ623278 vs. ExPASy Swiss-Prot
Match: Y1848_ARATH (Probable inactive receptor kinase At1g48480 OS=Arabidopsis thaliana GN=RKL1 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.716e-11
Identity = 44/117 (37.61%), Postives = 65/117 (55.56%), Query Frame = 3
Query:   36 GYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDN-NLVGWVKQHAKLK-ISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQAGSGLD 380
            GY  PE     R S KGDVYS+GVVLLEL+TGK P++S    +  +L  WVK  A+ +   +VFD EL+    + E  + + + +   C    P +RP M +V+   + ++  SG D
Sbjct:  533 GYRAPEVTDPKRVSQKGDVYSFGVVLLELITGKAPSNSVMNEEGVDLPRWVKSVARDEWRREVFDSELLSLATDEEEMMAEMVQLGLECTSQHPDQRPEMSEVVRKMENLRPYSGSD 649          
BLAST of BQ623278 vs. ExPASy Swiss-Prot
Match: PBS1_ARATH (Serine/threonine-protein kinase PBS1 OS=Arabidopsis thaliana GN=PBS1 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.716e-11
Identity = 44/116 (37.93%), Postives = 63/116 (54.31%), Query Frame = 3
Query:    3 HLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDS-ADFGDNNLVGWVKQ--HAKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVM 341
            H+S   + GT GY  PEY  + + + K DVYS+GVV LEL+TG++  DS    G+ NLV W +   + + K   + DP L    P     L Q L VAS C+ ++   RP +  V+
Sbjct:  245 HVSTRVM-GTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGRKAIDSEMPHGEQNLVAWARPLFNDRRKFIKLADPRLKGRFPT--RALYQALAVASMCIQEQAATRPLIADVV 357          
BLAST of BQ623278 vs. ExPASy Swiss-Prot
Match: PAM74_ARATH (Probable LRR receptor-like serine/threonine-protein kinase PAM74 OS=Arabidopsis thaliana GN=PAM74 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.716e-11
Identity = 45/138 (32.61%), Postives = 75/138 (54.35%), Query Frame = 3
Query:    3 HLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVK-QHAKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKE------IQAGSGLDSQSTI 395
            H+S + +AGTPGY+ PEYYQ+ R   K DVYS+G+VLLE++T  +P        +++  WV  +  +  I+ + DP L  +  +  +   + L +A +C +     RP M QV    KE      ++    +DSQ+++
Sbjct:  736 HIS-TVVAGTPGYLDPEYYQTTRLGEKSDVYSFGIVLLEIIT-NQPVIDQSRSKSHISQWVGFELTRGDITKIMDPNLNGDYESRSV--WRVLELAMSCANPSSVNRPNMSQVANELKECLVSENLRENMNMDSQNSL 869          
BLAST of BQ623278 vs. ExPASy Swiss-Prot
Match: Y5168_ARATH (Probably inactive receptor-like protein kinase At5g41680 OS=Arabidopsis thaliana GN=At5g41680 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.241e-11
Identity = 43/122 (35.25%), Postives = 66/122 (54.10%), Query Frame = 3
Query:   18 TLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDN-NLVGWVKQ-HAKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQAGSGL 377
            T   + GY  PE   + + +   DVYS+GVVLLELLTGK P       +N +L  W++   +K    +VFD ELM +   IE EL++ L +  AC+  +P  RP +  ++ + ++I     L
Sbjct:  239 TTLRSSGYHAPEITDTRKSTQFSDVYSFGVVLLELLTGKSPASPLSLDENMDLASWIRSVVSKEWTGEVFDNELMMQ-MGIEEELVEMLQIGLACVALKPQDRPHITHIVKLIQDIPTNFNL 359          
BLAST of BQ623278 vs. ExPASy Swiss-Prot
Match: SERK5_ARATH (Somatic embryogenesis receptor kinase 5 OS=Arabidopsis thaliana GN=SERK5 PE=1 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 2.241e-11
Identity = 44/125 (35.20%), Postives = 69/125 (55.20%), Query Frame = 3
Query:   15 STLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNN---LVGWVKQHAK-LKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQAGSGL 377
            + + GT G++ PEY  + + S K DV+ YGV+LLEL+TG++  D A   +++   L+ WVK+  K  K+  + D EL  E   +E E+ Q + +A  C       RP M +V+ M +    G GL
Sbjct:  436 TAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQKAFDLARLANDDDIMLLDWVKEVLKEKKLESLVDAEL--EGKYVETEVEQLIQMALLCTQSSAMERPKMSEVVRMLE----GDGL 554          
The following BLAST results are available for this feature:
BLAST of BQ623278 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 80
Match NameE-valueIdentityDescription
WAKLP_ARATH1.314e-1144.63Wall-associated receptor kinase-like 15 OS=Arabido... [more]
PEPR1_ARATH1.314e-1131.25Leucine-rich repeat receptor-like protein kinase P... [more]
APK2B_ARATH1.314e-1133.78Protein kinase 2B, chloroplastic OS=Arabidopsis th... [more]
Y5977_ARATH1.716e-1131.82Probable leucine-rich repeat receptor-like protein... [more]
Y4885_ARATH1.716e-1135.71Probable LRR receptor-like serine/threonine-protei... [more]
Y1848_ARATH1.716e-1137.61Probable inactive receptor kinase At1g48480 OS=Ara... [more]
PBS1_ARATH1.716e-1137.93Serine/threonine-protein kinase PBS1 OS=Arabidopsi... [more]
PAM74_ARATH1.716e-1132.61Probable LRR receptor-like serine/threonine-protei... [more]
Y5168_ARATH2.241e-1135.25Probably inactive receptor-like protein kinase At5... [more]
SERK5_ARATH2.241e-1135.20Somatic embryogenesis receptor kinase 5 OS=Arabido... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00369 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00369 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623278 ID=BQ623278; Name=BQ623278; organism=Citrus sinensis; type=EST; length=704bp
CACATTTGAGTGTCAGTACGCTAGCAGGCACACCCGGCTATGTCCCTCCC
GAATACTATCAAAGCTTTAGATGTTCGACGAAAGGCGATGTTTACAGTTA
TGGTGTAGTTTTGCTCGAGTTGCTAACGGGAAAAAGGCCAACAGATTCAG
CAGATTTCGGTGACAATAACCTAGTTGGGTGGGTAAAGCAGCATGCGAAG
CTGAAAATAAGCGATGTCTTTGATCCAGAACTCATGAAGGAGGATCCAAA
CATCGAGATTGAGCTTCTTCAACACTTGCATGTAGCGAGTGCTTGCCTGG
ATGATCGACCATGGAGGAGACCGACAATGATTCAGGTTATGGCAATGTTT
AAAGAAATCCAAGCCGGTTCAGGACTTGACTCGCAATCTACTATTGCCAC
TGATGAAGGAGGTTTCGGTACAGTCGAAATGGTAGAGATGAGCATCCAAG
AAGCTCCAGAACTAAGCACCAAGCCTTAAGCCATTCAATTTTCAGGACAA
GCATTCTTTCAGTGCCCCAAAATTTTCCCACTTGAAAACCAAAAAAGTTG
CCTTTGTATCTCTACCATTTAGTGTATGTAATCTTTGTATCCCTTTTGAA
AATTCTTGTTATTTATACATAAAAAAAAAAAAGTTGCTTTTAACTTTGTT
ATCGAATGTGTAAATATACAACCCCAAGTTTGTTATGCTATCTTGGTTCT
TTAA
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