BQ623278

Overview
NameBQ623278
Unique NameBQ623278
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length704
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5158 contig Csv1_Contig5158:245..948. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623278 vs. ExPASy Swiss-Prot
Match: SERK4_ARATH (Somatic embryogenesis receptor kinase 4 OS=Arabidopsis thaliana GN=SERK4 PE=1 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 2.241e-11
Identity = 44/125 (35.20%), Postives = 69/125 (55.20%), Query Frame = 3
Query:   15 STLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNN---LVGWVKQHAK-LKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQAGSGL 377
            + + GT G++ PEY  + + S K DV+ YGV+LLEL+TG++  D A   +++   L+ WVK+  K  K+  + D EL  E   +E E+ Q + +A  C       RP M +V+ M +    G GL
Sbjct:  455 TAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQKAFDLARLANDDDIMLLDWVKEVLKEKKLESLVDAEL--EGKYVETEVEQLIQMALLCTQSSAMERPKMSEVVRMLE----GDGL 573          
BLAST of BQ623278 vs. ExPASy Swiss-Prot
Match: CRI4_MAIZE (Putative receptor protein kinase CRINKLY4 OS=Zea mays GN=CR4 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.927e-11
Identity = 50/134 (37.31%), Postives = 72/134 (53.73%), Query Frame = 3
Query:   24 AGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKISDVF---DPELMKEDPNIEIELLQHL-HVASACLDDRPWRRPTMIQVMAMFKEIQA---GSGLDSQSTIATD 404
            AGT GY+ PEYY+    +TK DVYS+GVVLLE+L+G++  D   F + N+V W      +K  D+F   DP L    P  ++E L+ +  VA  C+  R   RP+M +V    +   A   GS    Q  + T+
Sbjct:  672 AGTLGYLDPEYYRLHYLTTKSDVYSFGVVLLEILSGRKAID-MQFEEGNIVEWAV--PLIKAGDIFAILDPVL---SPPSDLEALKKIASVACKCVRMRGKDRPSMDKVTTALEHALALLMGSPCIEQPILPTE 799          
BLAST of BQ623278 vs. ExPASy Swiss-Prot
Match: NAK_ARATH (Probable serine/threonine-protein kinase NAK OS=Arabidopsis thaliana GN=NAK PE=2 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 3.823e-11
Identity = 45/125 (36.00%), Postives = 67/125 (53.60%), Query Frame = 3
Query:    3 HLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTD-SADFGDNNLVGWVKQHA--KLKISDVFDPELMKEDPNIEIELLQHLHVASA---CLDDRPWRRPTMIQVMAMFKEI 359
            H+S   + GT GY  PEY  +   S K DVYS+GVVLLELL+G+R  D +   G++NLV W + +   K ++  V DP L       +  L + L +A     C+      RPTM +++   +E+
Sbjct:  235 HVSTRVM-GTQGYAAPEYLATGHLSVKSDVYSFGVVLLELLSGRRAIDKNQPVGEHNLVDWARPYLTNKRRLLRVMDPRLQG-----QYSLTRALKIAVLALDCISIDAKSRPTMNEIVKTMEEL 353          
BLAST of BQ623278 vs. ExPASy Swiss-Prot
Match: BAK1_ARATH (BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 OS=Arabidopsis thaliana GN=BAK1 PE=1 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 3.823e-11
Identity = 45/125 (36.00%), Postives = 68/125 (54.40%), Query Frame = 3
Query:   15 STLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNN---LVGWVKQHAK-LKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQAGSGL 377
            + + GT G++ PEY  + + S K DV+ YGV+LLEL+TG+R  D A   +++   L+ WVK   K  K+  + D +L     + E+E  Q + VA  C    P  RP M +V+ M +    G GL
Sbjct:  450 TAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVE--QLIQVALLCTQSSPMERPKMSEVVRMLE----GDGL 568          
BLAST of BQ623278 vs. ExPASy Swiss-Prot
Match: Y5596_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g59680 OS=Arabidopsis thaliana GN=At5g59680 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.521e-11
Identity = 49/149 (32.89%), Postives = 80/149 (53.69%), Query Frame = 3
Query:    3 HLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKISDVFDPELMKEDPNIEI-ELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQAGSGLDSQSTIATDEGGFGTVEMVEMSI 446
            H+S + +AGTPGY+ PEYY + R S K DVYS+G+VLLE++T +   D  +   +++  WV   ++L   D+     +K + + +     + L +A +C D    RRPTM  V+   KE      L S+++      G  T+   E+S+
Sbjct:  737 HVS-TVIAGTPGYLDPEYYHTSRLSEKSDVYSFGIVLLEMITNQAVID-RNRRKSHITQWV--GSELNGGDIAKIMDLKLNGDYDSRSAWRALELAMSCADPTSARRPTMSHVVIELKEC-----LVSENSRRNMSRGMDTLSSPEVSM 876          
BLAST of BQ623278 vs. ExPASy Swiss-Prot
Match: Y1518_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51860 OS=Arabidopsis thaliana GN=At1g51860 PE=2 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 8.517e-11
Identity = 46/116 (39.66%), Postives = 70/116 (60.34%), Query Frame = 3
Query:    3 HLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGD--NNLVGWVKQHAKLKISDVFDPELMKE-DPNIEIELLQHLHVASACLDDRPWRRPTMIQVM 341
            H+S + +AGTPGY+ PEYY++   S K DVYS+GVVLLE++T +   D        N+ VG++    K  I  + DP+LM + D N   ++++   +A AC++    RRPTM  V+
Sbjct:  740 HVS-TVVAGTPGYLDPEYYRTNWLSEKSDVYSFGVVLLEIVTNQPVIDKTRERPHINDWVGFML--TKGDIKSIVDPKLMGDYDTNGAWKIVE---LALACVNPSSNRRPTMAHVV 849          
BLAST of BQ623278 vs. ExPASy Swiss-Prot
Match: Y1154_ARATH (Probable serine/threonine-protein kinase At1g01540 OS=Arabidopsis thaliana GN=At1g01540 PE=1 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 8.517e-11
Identity = 39/111 (35.14%), Postives = 63/111 (56.76%), Query Frame = 3
Query:   27 GTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTD-SADFGDNNLVGWVKQH-AKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFK 353
            GT GYV PEY  +   + K D+YS+G++++E++TG+ P D S   G+ NLV W+K      +  +V DP++   +P     L + L VA  C+D    +RP M  ++ M +
Sbjct:  318 GTFGYVAPEYACTGMLNEKSDIYSFGILIMEIITGRNPVDYSRPQGETNLVDWLKSMVGNRRSEEVVDPKI--PEPPSSKALKRVLLVALRCVDPDANKRPKMGHIIHMLE 426          
BLAST of BQ623278 vs. ExPASy Swiss-Prot
Match: LRKA2_ARATH (Lectin-domain containing receptor kinase A4.2 OS=Arabidopsis thaliana GN=LECRKA4.2 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.517e-11
Identity = 41/112 (36.61%), Postives = 63/112 (56.25%), Query Frame = 3
Query:    9 SVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQ-HAKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVM 341
            + + + GT GY+ PE  ++ + S+  DV+++GV+LLE+++G+RPTDS  F    L  WV + HA+ +I    DP L      +E  L   L V   C   RP  RP+M  V+
Sbjct:  522 NTTVVVGTIGYMAPELARNGKSSSASDVFAFGVLLLEIVSGRRPTDSGTF---FLADWVMELHARGEILHAVDPRLGFGYDGVEARLA--LVVGLLCCHQRPTSRPSMRTVL 628          
BLAST of BQ623278 vs. ExPASy Swiss-Prot
Match: CLV1_ARATH (Receptor protein kinase CLAVATA1 OS=Arabidopsis thaliana GN=CLV1 PE=1 SV=3)

HSP 1 Score: 67.3958 bits (163), Expect = 8.517e-11
Identity = 40/119 (33.61%), Postives = 70/119 (58.82%), Query Frame = 3
Query:   12 VSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDN-NLVGWVKQHAKLKISDVFDPELMKE--DPNIE----IELLQHLHVASACLDDRPWRRPTMIQVMAM 347
            +S++AG+ GY+ PEY  + +   K DVYS+GVVLLEL+ GK+P    +FG+  ++V WV+ + + +I+   D  ++    DP +       ++    +A  C+++    RPTM +V+ M
Sbjct:  851 MSSIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPV--GEFGEGVDIVRWVR-NTEEEITQPSDAAIVVAIVDPRLTGYPLTSVIHVFKIAMMCVEEEAAARPTMREVVHM 966          
BLAST of BQ623278 vs. ExPASy Swiss-Prot
Match: ACR4_ARATH (Serine/threonine-protein kinase-like protein ACR4 OS=Arabidopsis thaliana GN=ACR4 PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.517e-11
Identity = 56/179 (31.28%), Postives = 87/179 (48.60%), Query Frame = 3
Query:   24 AGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKL-KISDVFDPELMKEDPNIEIELLQHL-HVASACLDDRPWRRPTMIQVMAMFKE--IQAGSGLDSQSTIATDEGGFGTVEMVEMSIQEAPELSTKP*AIQFSGQAFFQCPKIFPLENQKS 548
            AGT GY+ PEYY+    +TK DVYS+GV+LLE+L+G++  D   + + N+V W     K   I+ + DP L       EIE L+ +  VA  C+  R   RP+M +V    +    Q      S+  I   E   G+  M + S +   + S      +F G ++   P +   + +KS
Sbjct:  679 AGTLGYLDPEYYRLHYLTTKSDVYSFGVLLLEILSGRKAID-MHYEEGNIVEWAVPLIKAGDINALLDPVLKHPS---EIEALKRIVSVACKCVRMRGKDRPSMDKVTTALERALAQLMGNPSSEQPILPTEVVLGSSRMHKKSWRIGSKRSGSE-NTEFRGGSWITFPSVTSSQRRKS 852          
The following BLAST results are available for this feature:
BLAST of BQ623278 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 80
Match NameE-valueIdentityDescription
SERK4_ARATH2.241e-1135.20Somatic embryogenesis receptor kinase 4 OS=Arabido... [more]
CRI4_MAIZE2.927e-1137.31Putative receptor protein kinase CRINKLY4 OS=Zea m... [more]
NAK_ARATH3.823e-1136.00Probable serine/threonine-protein kinase NAK OS=Ar... [more]
BAK1_ARATH3.823e-1136.00BRASSINOSTEROID INSENSITIVE 1-associated receptor ... [more]
Y5596_ARATH6.521e-1132.89Probable LRR receptor-like serine/threonine-protei... [more]
Y1518_ARATH8.517e-1139.66Probable LRR receptor-like serine/threonine-protei... [more]
Y1154_ARATH8.517e-1135.14Probable serine/threonine-protein kinase At1g01540... [more]
LRKA2_ARATH8.517e-1136.61Lectin-domain containing receptor kinase A4.2 OS=A... [more]
CLV1_ARATH8.517e-1133.61Receptor protein kinase CLAVATA1 OS=Arabidopsis th... [more]
ACR4_ARATH8.517e-1131.28Serine/threonine-protein kinase-like protein ACR4 ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00369 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00369 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623278 ID=BQ623278; Name=BQ623278; organism=Citrus sinensis; type=EST; length=704bp
CACATTTGAGTGTCAGTACGCTAGCAGGCACACCCGGCTATGTCCCTCCC
GAATACTATCAAAGCTTTAGATGTTCGACGAAAGGCGATGTTTACAGTTA
TGGTGTAGTTTTGCTCGAGTTGCTAACGGGAAAAAGGCCAACAGATTCAG
CAGATTTCGGTGACAATAACCTAGTTGGGTGGGTAAAGCAGCATGCGAAG
CTGAAAATAAGCGATGTCTTTGATCCAGAACTCATGAAGGAGGATCCAAA
CATCGAGATTGAGCTTCTTCAACACTTGCATGTAGCGAGTGCTTGCCTGG
ATGATCGACCATGGAGGAGACCGACAATGATTCAGGTTATGGCAATGTTT
AAAGAAATCCAAGCCGGTTCAGGACTTGACTCGCAATCTACTATTGCCAC
TGATGAAGGAGGTTTCGGTACAGTCGAAATGGTAGAGATGAGCATCCAAG
AAGCTCCAGAACTAAGCACCAAGCCTTAAGCCATTCAATTTTCAGGACAA
GCATTCTTTCAGTGCCCCAAAATTTTCCCACTTGAAAACCAAAAAAGTTG
CCTTTGTATCTCTACCATTTAGTGTATGTAATCTTTGTATCCCTTTTGAA
AATTCTTGTTATTTATACATAAAAAAAAAAAAGTTGCTTTTAACTTTGTT
ATCGAATGTGTAAATATACAACCCCAAGTTTGTTATGCTATCTTGGTTCT
TTAA
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