BQ623282

Overview
NameBQ623282
Unique NameBQ623282
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length626
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623282 vs. ExPASy Swiss-Prot
Match: METE_ERWCT (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Erwinia carotovora subsp. atroseptica GN=metE PE=3 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 1.402e-40
Identity = 86/151 (56.95%), Postives = 103/151 (68.21%), Query Frame = 2
Query:    2 ALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLR 454
            ALREGLPL +S+   YL WAV +FR+     +D TQIHTHMCY  FNDI+ SI  +DADVITIE SRSD +LL  F E  +Y   IGPGVYDIHSP +PS E +   + K    +    LWVNPDCGLKTR + E + AL+NMV AA+ LR
Sbjct:  602 ALREGLPLHRSDWDAYLAWAVDAFRLNAAVAKDDTQIHTHMCYCEFNDIMDSIAALDADVITIETSRSDMELLESFEE-FEYPNEIGPGVYDIHSPNVPSVEWMEALLKKAAQRIPAERLWVNPDCGLKTRGWPETRQALANMVQAAQRLR 751          
BLAST of BQ623282 vs. ExPASy Swiss-Prot
Match: METE_BACCN (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=metE PE=3 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 1.402e-40
Identity = 83/154 (53.90%), Postives = 104/154 (67.53%), Query Frame = 2
Query:    2 ALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQL 463
            ALREG+PL++ +   Y++WAV SFR+    V + TQIHTHMCYSNF DI+ +I  +DADVI+IE SRS  + +    E   Y  GIG GVYDIHSPR+PS EE+   + + L V      W+NPDCGLKTR+  EV PAL +MV AAK  RT L
Sbjct:  606 ALREGMPLKEKDWDSYIEWAVQSFRLATASVANETQIHTHMCYSNFEDIVDAIRALDADVISIETSRSHGEFIHTL-EQTTYEKGIGLGVYDIHSPRVPSKEEMYTIVEQSLKVCNPKYFWINPDCGLKTRRTEEVLPALEHMVEAAKEARTLL 758          
BLAST of BQ623282 vs. ExPASy Swiss-Prot
Match: METE_ENT38 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Enterobacter sp. (strain 638) GN=metE PE=3 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 1.831e-40
Identity = 87/151 (57.62%), Postives = 102/151 (67.55%), Query Frame = 2
Query:    2 ALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLR 454
            ALREGLPLR+S+   YL W V +FRI     ++ TQIHTHMCY  FNDI+ SI  +DADVITIE SRSD +LL  F E   Y   IGPGVYDIHSP +PS E I   + K    +    LWVNPDCGLKTR + E + AL+NMV AA+ LR
Sbjct:  602 ALREGLPLRRSDWDAYLQWGVEAFRINAAVAKNDTQIHTHMCYCEFNDIMDSIAALDADVITIETSRSDMELLESFEE-FDYPNEIGPGVYDIHSPNVPSVEWIEALLAKAAQRIPAERLWVNPDCGLKTRGWPETRAALANMVKAAQNLR 751          
BLAST of BQ623282 vs. ExPASy Swiss-Prot
Match: METE_RHOSR (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Rhodococcus sp. (strain RHA1) GN=metE PE=3 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 3.123e-40
Identity = 81/154 (52.60%), Postives = 107/154 (69.48%), Query Frame = 2
Query:    2 ALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQL 463
            ALRE LPLR ++   YLDW+V +FR+   GV D+TQIHTH+CYS F ++I +I  +DADV +IE +RS  ++L      V +  G+GPGVYDIHSPR+P  EEIA  + + L  +    LWVNPDCGLKTR   EV+ +L N+V AAKL+R +L
Sbjct:  601 ALRELLPLRAADQPGYLDWSVGAFRLATSGVSDSTQIHTHLCYSEFGEVIEAIARLDADVTSIEAARSHMEVLDDL-SAVGFDLGVGPGVYDIHSPRVPGVEEIAASLREALKAVPVERLWVNPDCGLKTRGPAEVEASLRNLVDAAKLVRAEL 753          
BLAST of BQ623282 vs. ExPASy Swiss-Prot
Match: METE_LISMO (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Listeria monocytogenes GN=metE PE=3 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 3.123e-40
Identity = 82/153 (53.59%), Postives = 108/153 (70.59%), Query Frame = 2
Query:    2 ALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQ 460
            ALREGLPL+++    YL+ AV+SF++T   VQ+ TQIHTHMCYS+F+DII +I  +DADVI+IE SRS  +++S F E V Y   IG GVYDIHSPR+P+  EI D I + L  ++    W+NPDCGLKTRK  E   AL +M+ A K +R +
Sbjct:  608 ALREGLPLKQARWEKYLNDAVYSFKLTTASVQNDTQIHTHMCYSDFDDIIDTISALDADVISIETSRSHGEIISTFEE-VTYDKEIGLGVYDIHSPRVPTVTEIQDNIRRALRAIDAKQFWINPDCGLKTRKEPETIAALQDMIKATKEVRAE 759          
BLAST of BQ623282 vs. ExPASy Swiss-Prot
Match: METE_MYCLE (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Mycobacterium leprae GN=metE PE=3 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 4.079e-40
Identity = 82/151 (54.30%), Postives = 105/151 (69.54%), Query Frame = 2
Query:    2 ALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLR 454
            ALRE LPLR+++   YL WAV +FR+   GV D+TQIHTH+CYS F ++I +I D+DADV +IE +RS  ++L      V +   IGPGVYDIHSPR+PST+EIA  +   L  +    LWVNPDCGLKTR   EV  +L NMVAAA+ +R
Sbjct:  608 ALRELLPLRRADQDEYLCWAVKAFRLATSGVADSTQIHTHLCYSEFGEVIGAIADLDADVTSIEAARSHMEVLDDLN-AVGFANSIGPGVYDIHSPRVPSTDEIAKSLRAALKAIPMQRLWVNPDCGLKTRSVDEVSASLQNMVAAARQVR 757          
BLAST of BQ623282 vs. ExPASy Swiss-Prot
Match: METE_SYNJB (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Synechococcus sp. GN=metE PE=3 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 5.327e-40
Identity = 86/155 (55.48%), Postives = 105/155 (67.74%), Query Frame = 2
Query:    2 ALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEK-LLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQL 463
            ALREGLPL+K     YL WAV +FR+   G +  TQIHTHMCYS F DII  I  +DADV++IENSRS+ K LL + + G  Y   +G GVYD+HSP +PS E+I  ++   LA L     WVNPDCGLKTR++ EV PAL NMVAAA  L  +L
Sbjct:  592 ALREGLPLKKERWPEYLSWAVDAFRLATGGAKPETQIHTHMCYSEFGDIIEHIERLDADVLSIENSRSNNKTLLQIAQAG--YRHQVGNGVYDVHSPAVPSVEQILQQLRTGLAHLPVEQTWVNPDCGLKTRRWEEVIPALKNMVAAAHQLGEEL 744          
BLAST of BQ623282 vs. ExPASy Swiss-Prot
Match: METE_DESVM (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) GN=metE PE=3 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 5.327e-40
Identity = 82/151 (54.30%), Postives = 108/151 (71.52%), Query Frame = 2
Query:    2 ALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLR 454
            ALREGLPLR++ HA YLD AV +FR+ + GV+D TQIHTHMCY +F+DII  +  +DADVI++E SRS  +LL VF     Y   +GPGVYDIHSPR+PS +E+   +     VL  + LW NPDCGLKTR + E + +L+++VAAA  +R
Sbjct:  628 ALREGLPLRRAAHAAYLDAAVGAFRLASSGVRDATQIHTHMCYCDFHDIIDHVAALDADVISLEASRSRMELLDVFATHA-YPNEVGPGVYDIHSPRVPSIDEMETLLRAASRVLPLDRLWANPDCGLKTRDWPETRASLAHLVAAATRVR 777          
BLAST of BQ623282 vs. ExPASy Swiss-Prot
Match: METE_STRMU (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Streptococcus mutans GN=metE PE=1 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 6.957e-40
Identity = 86/156 (55.13%), Postives = 105/156 (67.31%), Query Frame = 2
Query:    2 ALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLAS 469
            ALREGLPLRKS+   YLD AVH+F I    V+D TQIHTHMCYS F++II +I  +DADVI+IE SRS   ++  F   V Y  GIG GVYDIHSPR+P+ EE+   I + L  L     WVNPDCGLKTR+  E   AL  +VAA K +R +L +
Sbjct:  591 ALREGLPLRKSKQKAYLDDAVHAFHIATSSVKDETQIHTHMCYSKFDEIIDAIRALDADVISIETSRSHGDIIESFETAV-YPLGIGLGVYDIHSPRVPTKEEVVANIERPLRQLSPTQFWVNPDCGLKTRQEPETIAALKVLVAATKEVRQKLGN 745          
BLAST of BQ623282 vs. ExPASy Swiss-Prot
Match: METE_PARL1 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) GN=metE PE=3 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 6.957e-40
Identity = 84/156 (53.85%), Postives = 104/156 (66.67%), Query Frame = 2
Query:    2 ALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLAS 469
            ALREGLPL +SE   YL WA   FR++ C  +D TQIHTHMCYS FNDII +I D+DADVI+IE SRS  +LL  F +   Y   IGPGVYDIHSPR+P+  E+   +      L +  +WVNPDCGLKTR + E + AL  MV AA+ LR  + +
Sbjct:  609 ALREGLPLHRSEWDTYLRWACECFRLSVCVARDETQIHTHMCYSEFNDIIEAIADLDADVISIETSRSRMELLDAFVD-FSYPNDIGPGVYDIHSPRVPARGEMLSLLRLAAERLPSERIWVNPDCGLKTRGWPETEAALVEMVEAARELRNAIGA 763          
The following BLAST results are available for this feature:
BLAST of BQ623282 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 274
Match NameE-valueIdentityDescription
METE_ERWCT1.402e-4056.955-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BACCN1.402e-4053.905-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ENT381.831e-4057.625-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_RHOSR3.123e-4052.605-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_LISMO3.123e-4053.595-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_MYCLE4.079e-4054.305-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_SYNJB5.327e-4055.485-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_DESVM5.327e-4054.305-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STRMU6.957e-4055.135-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_PARL16.957e-4053.855-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00373 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00373 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623282 ID=BQ623282; Name=BQ623282; organism=Citrus sinensis; type=EST; length=626bp
TGCCTTGAGGGAAGGATTGCCTCTTAGGAAATCTGAGCATGCTTTCTACT
TGGACTGGGCAGTCCACTCCTTCAGAATCACCAACTGTGGCGTCCAGGAC
ACTACCCAGATCCACACCCACATGTGCTACTCCAACTTCAACGACATTAT
CCACTCAATTATCGACATGGATGCTGATGTGATCACCATTGAGAACTCTC
GTTCTGATGAGAAGCTCCTGTCTGTCTTCCGTGAGGGAGTCAAGTATGGT
GCTGGAATTGGCCCTGGTGTGTATGACATCCACTCTCCAAGAATACCATC
AACTGAAGAAATTGCTGACAGAATCAACAAGATGCTTGCTGTGCTAGAAA
CCAACATTTTGTGGGTTAACCCTGACTGTGGTCTTAAGACTCGCAAGTAC
ACTGAGGTGAAGCCAGCCCTCTCAAACATGGTCGCTGCTGCCAAGCTACT
CCGCACCCAGCTTGCCAGTGCCAAGTGAGTGGTTCTGGAGATTGGAGGGA
TACTTCCTGAGCCATTGATTTTTTTTTTTTTCACTTTAAACAAAGAAAGA
AAATTCCTGTCTTATTACCTATTCAAATACTGGGGGTCCGGAAGGGATGA
AATTTTCCCTATGCATATATGCACTA
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