BQ623282

Overview
NameBQ623282
Unique NameBQ623282
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length626
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9752 contig Csv1_Contig9752:361..985. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623282 vs. ExPASy Swiss-Prot
Match: METE_PSEA8 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Pseudomonas aeruginosa (strain LESB58) GN=metE PE=3 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 1.890e-45
Identity = 94/155 (60.65%), Postives = 108/155 (69.68%), Query Frame = 2
Query:    2 ALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLA 466
            A REGLPLR++    YL+WA  +FR+   GV+D TQIHTHMCYS FND+I SI  MDADVITIE SRSD +LL  F E   Y   IGPGVYDIHSPR+PS EEI   + K    +    LWVNPDCGLKTR + E + AL NMVAAA+ LR  LA
Sbjct:  611 AFREGLPLRRNAWPHYLEWATEAFRLCASGVRDETQIHTHMCYSEFNDVIESIAAMDADVITIETSRSDMELLEAF-EQFDYPNEIGPGVYDIHSPRVPSREEIVALLRKAARRIPAERLWVNPDCGLKTRAWPETEAALVNMVAAARELRGDLA 764          
BLAST of BQ623282 vs. ExPASy Swiss-Prot
Match: METE_ALHEH (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=metE PE=3 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 1.890e-45
Identity = 93/158 (58.86%), Postives = 112/158 (70.89%), Query Frame = 2
Query:    2 ALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLASAK 475
            ALREGLPL++ +   YLDWAV  FR+T    QD TQIHTHMCYS FNDI+ +I  +DADVITIE SRSD +LL VF EG +Y   IGPGVYDIHSP  PS + +   + K    +    LWVNPDCGLKTR + EV+PAL NMVAAA++LR +   A+
Sbjct:  608 ALREGLPLQQRQWPGYLDWAVDCFRLTASVAQDATQIHTHMCYSEFNDIMGAIATLDADVITIETSRSDMELLEVF-EGFEYPNEIGPGVYDIHSPNTPSVDWMVRLMEKAARRIPVERLWVNPDCGLKTRAWAEVEPALQNMVAAAEILRERYGQAQ 764          
BLAST of BQ623282 vs. ExPASy Swiss-Prot
Match: METE_PSEU5 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Pseudomonas stutzeri (strain A1501) GN=metE PE=3 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 3.224e-45
Identity = 91/151 (60.26%), Postives = 105/151 (69.54%), Query Frame = 2
Query:    2 ALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLR 454
            A REGLPLR+ +   YLDWAV +FR+   GV+D TQIHTHMCYS FND+I SI  MDADVITIE SRS  +LL  FR    Y   IGPGVYDIHSPR+P T E+   + K    +    LWVNPDCGLKTR + E + AL NMVAAA+ LR
Sbjct:  614 AFREGLPLRREQWRHYLDWAVEAFRLCASGVRDETQIHTHMCYSEFNDVIESIAAMDADVITIETSRSQMELLEAFR-AFDYPNDIGPGVYDIHSPRVPDTAEMVQLLEKAAECIPAERLWVNPDCGLKTRGWPETEAALVNMVAAARQLR 763          
BLAST of BQ623282 vs. ExPASy Swiss-Prot
Match: METE_VIBVU (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Vibrio vulnificus GN=metE PE=3 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 4.211e-45
Identity = 90/155 (58.06%), Postives = 109/155 (70.32%), Query Frame = 2
Query:    2 ALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLA 466
            A+REGLPL+K +H  YLDWAV +FRI+    +  TQIHTHMCYS FN+II S+  +DADVITIE SRS+ +LL  F E   Y   IGPGVYDIHSP IPS E I D + K    +    LWVNPDCGLKTR + E + AL+N+V+AAK LR + A
Sbjct:  607 AIREGLPLKKRDHQNYLDWAVEAFRISAASARPETQIHTHMCYSEFNEIIESVAALDADVITIETSRSNMELLKAFEE-FNYPNEIGPGVYDIHSPNIPSEEWIVDLVKKAAQKIPVERLWVNPDCGLKTRNWPETEAALANLVSAAKRLRKEFA 760          
BLAST of BQ623282 vs. ExPASy Swiss-Prot
Match: METE_MESSB (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Mesorhizobium sp. (strain BNC1) GN=metE PE=3 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 4.211e-45
Identity = 90/151 (59.60%), Postives = 112/151 (74.17%), Query Frame = 2
Query:    2 ALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLR 454
            ALREGLPLR++E   YLDWAV  FR+ + GV+  TQIHTHMCY+ FNDII +I  MDADVI+IE SRS  +LL  FR   +Y   IGPGV+DIHSPR+P  +E+AD + K    L+   +WVNPDCGLKTRK+ EV+ AL+NMV AA+ +R
Sbjct:  618 ALREGLPLREAERPAYLDWAVECFRLASSGVKPETQIHTHMCYAEFNDIIDAIAAMDADVISIETSRSKMELLRAFR-AFRYPNDIGPGVFDIHSPRVPPADEMADLLRKAEDGLDPRQIWVNPDCGLKTRKWEEVRFALANMVEAARQMR 767          
BLAST of BQ623282 vs. ExPASy Swiss-Prot
Match: METE_PSEA7 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Pseudomonas aeruginosa (strain PA7) GN=metE PE=3 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 5.500e-45
Identity = 89/151 (58.94%), Postives = 109/151 (72.19%), Query Frame = 2
Query:    2 ALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLR 454
            A REGLPLR+++   YL+WA  +FR+   GV+D TQIHTHMCYS FND+I SI  MDADVITIE SRSD +LL  F E   Y   IGPGVYDIHSPR+P+ E++   ++K    +    LWVNPDCGLKTR + E + AL+NMVAAA+ LR
Sbjct:  609 AFREGLPLRRADWPHYLEWATEAFRLCASGVRDETQIHTHMCYSEFNDVIESIAAMDADVITIETSRSDMELLEAF-EAFAYPNEIGPGVYDIHSPRVPAVEDMVKLLSKAAERIPAARLWVNPDCGLKTRAWAETEAALANMVAAARQLR 758          
BLAST of BQ623282 vs. ExPASy Swiss-Prot
Match: METE_BLOFL (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Blochmannia floridanus GN=metE PE=3 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 7.183e-45
Identity = 85/151 (56.29%), Postives = 112/151 (74.17%), Query Frame = 2
Query:    2 ALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLR 454
            ALREGLPL+KSE ++YL WA+++F+IT   V+D TQIHTHMCYS FN+II  I+ +D DVI+IE+SRSD +LL   +   K    IGPG+YDIHS   PS  EI D++ K+L  +  + LW+NPDCGLKTR + E++ +L+NMV AAK LR
Sbjct:  612 ALREGLPLKKSEQSYYLKWAINTFKITVSSVKDNTQIHTHMCYSEFNEIIDDILKLDVDVISIESSRSDLQLLQFIKTAGKKLNEIGPGIYDIHSIHQPSINEIMDKLKKLLQYIPKDRLWINPDCGLKTRSWNEIRESLNNMVIAAKTLR 762          
BLAST of BQ623282 vs. ExPASy Swiss-Prot
Match: METE_VIBVY (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Vibrio vulnificus (strain YJ016) GN=metE PE=3 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 9.381e-45
Identity = 89/155 (57.42%), Postives = 109/155 (70.32%), Query Frame = 2
Query:    2 ALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLA 466
            A+REGLPL+K +H  YLDWA+ +FRI+    +  TQIHTHMCYS FN+II S+  +DADVITIE SRS+ +LL  F E   Y   IGPGVYDIHSP IPS E I D + K    +    LWVNPDCGLKTR + E + AL+N+V+AAK LR + A
Sbjct:  607 AIREGLPLKKRDHQNYLDWALEAFRISAASARPETQIHTHMCYSEFNEIIESVAALDADVITIETSRSNMELLKAFEE-FNYPNEIGPGVYDIHSPNIPSEEWIVDLVKKAAQKIPVERLWVNPDCGLKTRNWPETEAALANLVSAAKRLRKEFA 760          
BLAST of BQ623282 vs. ExPASy Swiss-Prot
Match: METE_PSEPW (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Pseudomonas putida (strain W619) GN=metE PE=3 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 9.381e-45
Identity = 92/151 (60.93%), Postives = 106/151 (70.20%), Query Frame = 2
Query:    2 ALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLR 454
            A REGLPLR+S    YL+WA  +FR+   GV+D TQIHTHMCYS FND+I SI  MDADVITIE SRSD +LL  F E   Y   IGPGVYDIHSPR+PS EE+   + K    +    LWVNPDCGLKTR + E + AL NMVAAA+ LR
Sbjct:  614 AFREGLPLRRSAWPAYLEWATEAFRLCASGVRDETQIHTHMCYSEFNDVIESIAAMDADVITIETSRSDMELLEAF-EKFDYPNEIGPGVYDIHSPRVPSREEMVKLLRKAALRIPAERLWVNPDCGLKTRAWPETEAALVNMVAAARELR 763          
BLAST of BQ623282 vs. ExPASy Swiss-Prot
Match: METE_DESRM (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Desulfotomaculum reducens (strain MI-1) GN=metE PE=3 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 9.381e-45
Identity = 89/154 (57.79%), Postives = 113/154 (73.38%), Query Frame = 2
Query:    2 ALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQL 463
            A +EG PLRK + A+Y +WAV SF++        TQIHTHMCYS+FNDIIH+I  MDADVITIE SRS  KLL+VF     Y   IGPG+YDIHSPR+PS EE+ ++I  ++ VL  + LW+NPDCGLKTRK+ E++ +LSNMV AA+ +R  L
Sbjct:  606 AFKEGYPLRKEKVAYYENWAVKSFKLAVSSAAIETQIHTHMCYSDFNDIIHTIEKMDADVITIETSRSGNKLLTVFATR-GYKNEIGPGIYDIHSPRVPSVEELEEKIRNLMLVLPPSKLWINPDCGLKTRKWDEIRWSLSNMVKAAQHIRLGL 758          
The following BLAST results are available for this feature:
BLAST of BQ623282 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 274
Match NameE-valueIdentityDescription
METE_PSEA81.890e-4560.655-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ALHEH1.890e-4558.865-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_PSEU53.224e-4560.265-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_VIBVU4.211e-4558.065-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_MESSB4.211e-4559.605-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_PSEA75.500e-4558.945-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BLOFL7.183e-4556.295-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_VIBVY9.381e-4557.425-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_PSEPW9.381e-4560.935-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_DESRM9.381e-4557.795-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00373 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00373 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623282 ID=BQ623282; Name=BQ623282; organism=Citrus sinensis; type=EST; length=626bp
TGCCTTGAGGGAAGGATTGCCTCTTAGGAAATCTGAGCATGCTTTCTACT
TGGACTGGGCAGTCCACTCCTTCAGAATCACCAACTGTGGCGTCCAGGAC
ACTACCCAGATCCACACCCACATGTGCTACTCCAACTTCAACGACATTAT
CCACTCAATTATCGACATGGATGCTGATGTGATCACCATTGAGAACTCTC
GTTCTGATGAGAAGCTCCTGTCTGTCTTCCGTGAGGGAGTCAAGTATGGT
GCTGGAATTGGCCCTGGTGTGTATGACATCCACTCTCCAAGAATACCATC
AACTGAAGAAATTGCTGACAGAATCAACAAGATGCTTGCTGTGCTAGAAA
CCAACATTTTGTGGGTTAACCCTGACTGTGGTCTTAAGACTCGCAAGTAC
ACTGAGGTGAAGCCAGCCCTCTCAAACATGGTCGCTGCTGCCAAGCTACT
CCGCACCCAGCTTGCCAGTGCCAAGTGAGTGGTTCTGGAGATTGGAGGGA
TACTTCCTGAGCCATTGATTTTTTTTTTTTTCACTTTAAACAAAGAAAGA
AAATTCCTGTCTTATTACCTATTCAAATACTGGGGGTCCGGAAGGGATGA
AATTTTCCCTATGCATATATGCACTA
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