BQ623282

Overview
NameBQ623282
Unique NameBQ623282
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length626
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9752 contig Csv1_Contig9752:361..985. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623282 vs. ExPASy Swiss-Prot
Match: METE_SHEON (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Shewanella oneidensis GN=metE PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.037e-43
Identity = 91/154 (59.09%), Postives = 108/154 (70.13%), Query Frame = 2
Query:    2 ALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQL 463
            A REGLPL++SE   YLDWAV++F+++  GV D TQIHTHMCYS FND I +I  MDADVITIE SRS  +LL+ F E  +Y   IGPGVYDIHSP  PS E +   I K    +    LWVNPDCGLKTR + EV+PAL NMV A + LR +L
Sbjct:  607 AFREGLPLKQSEWQAYLDWAVNAFKLSAAGVVDETQIHTHMCYSEFNDTIAAIAAMDADVITIETSRSRMELLNAF-EDFEYPNEIGPGVYDIHSPNTPSVEAMVHLIEKAAQKVPVRQLWVNPDCGLKTRTWDEVEPALKNMVDATRELRRRL 759          
BLAST of BQ623282 vs. ExPASy Swiss-Prot
Match: METE_PSEE4 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Pseudomonas entomophila (strain L48) GN=metE PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.037e-43
Identity = 90/151 (59.60%), Postives = 105/151 (69.54%), Query Frame = 2
Query:    2 ALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLR 454
            A REGLPLR+S    YL+WA  +FR+    V+D TQIHTHMCYS FND+I SI  MDADVITIE SRSD +LL  F E   Y   IGPGVYDIHSPR+P+ EE+   + K    +    LWVNPDCGLKTR + E + AL NMVAAA+ LR
Sbjct:  610 AFREGLPLRRSAWPHYLEWATEAFRLCASDVRDETQIHTHMCYSEFNDVIESIAAMDADVITIETSRSDMELLEAF-ERFDYPNEIGPGVYDIHSPRVPTKEEMVKLLRKAAQRIPAERLWVNPDCGLKTRAWPETEAALVNMVAAARELR 759          
BLAST of BQ623282 vs. ExPASy Swiss-Prot
Match: METE_HAEIN (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Haemophilus influenzae GN=metE PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.037e-43
Identity = 88/155 (56.77%), Postives = 110/155 (70.97%), Query Frame = 2
Query:    2 ALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLA 466
            A+REGLPL++++   YL WA  +FR+++ GVQD TQIHTHMCYS FNDI+ +I  +DADVITIE SRSD +LL+ F +  KY   IGPGVYDIHSPR+P+  E+   + K L V+    LWVNPDCGLKTR +TE    L  MV   K LR +LA
Sbjct:  603 AIREGLPLKRADWDAYLQWAGEAFRLSSMGVQDDTQIHTHMCYSEFNDILPAIAALDADVITIETSRSDMELLTAFAD-FKYPNDIGPGVYDIHSPRVPTATEVEHLLRKALNVIPKERLWVNPDCGLKTRGWTETIDQLKVMVDVTKKLRAELA 756          
BLAST of BQ623282 vs. ExPASy Swiss-Prot
Match: METE_HAEIG (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Haemophilus influenzae (strain PittGG) GN=metE PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.037e-43
Identity = 88/155 (56.77%), Postives = 110/155 (70.97%), Query Frame = 2
Query:    2 ALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLA 466
            A+REGLPL++++   YL WA  +FR+++ GVQD TQIHTHMCYS FNDI+ +I  +DADVITIE SRSD +LL+ F +  KY   IGPGVYDIHSPR+P+  E+   + K L V+    LWVNPDCGLKTR +TE    L  MV   K LR +LA
Sbjct:  603 AIREGLPLKRADWDAYLQWAGEAFRLSSMGVQDDTQIHTHMCYSEFNDILPAIAALDADVITIETSRSDMELLTAFAD-FKYPNDIGPGVYDIHSPRVPTATEVEHLLRKALNVIPKERLWVNPDCGLKTRGWTETIDQLKVMVDVTKKLRAELA 756          
BLAST of BQ623282 vs. ExPASy Swiss-Prot
Match: METE_HAEIE (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Haemophilus influenzae (strain PittEE) GN=metE PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.037e-43
Identity = 88/155 (56.77%), Postives = 110/155 (70.97%), Query Frame = 2
Query:    2 ALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLA 466
            A+REGLPL++++   YL WA  +FR+++ GVQD TQIHTHMCYS FNDI+ +I  +DADVITIE SRSD +LL+ F +  KY   IGPGVYDIHSPR+P+  E+   + K L V+    LWVNPDCGLKTR +TE    L  MV   K LR +LA
Sbjct:  603 AIREGLPLKRADWDAYLQWAGEAFRLSSMGVQDDTQIHTHMCYSEFNDILPAIAALDADVITIETSRSDMELLTAFAD-FKYPNDIGPGVYDIHSPRVPTAAEVEHLLRKALNVIPKERLWVNPDCGLKTRGWTETIDQLKVMVDVTKKLRAELA 756          
BLAST of BQ623282 vs. ExPASy Swiss-Prot
Match: METE_BURXL (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Burkholderia xenovorans (strain LB400) GN=metE PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.037e-43
Identity = 90/156 (57.69%), Postives = 109/156 (69.87%), Query Frame = 2
Query:    2 ALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLAS 469
            A REGLPLR+++ A YL+WA  +FRI+  GV D TQIHTHMCYS FNDI+ SI  MDADVITIE SRS  +LL  F     Y   IGPGVYDIHSPR+P  + +   + +   V+    LWVNPDCGLKTR + E + AL+NMV AAK LR +LA+
Sbjct:  602 AFREGLPLRRADWAAYLEWATRAFRISAAGVADQTQIHTHMCYSEFNDILPSIAAMDADVITIETSRSAMELLDGF-GAFAYPNEIGPGVYDIHSPRVPGADAMQRLLERACEVIPAERLWVNPDCGLKTRGWPETEAALANMVRAAKALRAKLAA 756          
BLAST of BQ623282 vs. ExPASy Swiss-Prot
Match: METE_BUCBP (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=metE PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.037e-43
Identity = 91/154 (59.09%), Postives = 110/154 (71.43%), Query Frame = 2
Query:    2 ALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQL 463
            ALREGLPLR S    YL WAV SF++++ GV D TQIHTHMCY  FNDI+++I+ +DADVITIE SRSD +LL  F+E  KY   IGPGVYDIHSP IPS E I   + + +  +    LWVNPDCGLKTR + E   +L NMV AAK+LR +L
Sbjct:  604 ALREGLPLRLSLRNEYLSWAVDSFKLSSSGVCDETQIHTHMCYCEFNDIMNAIVLLDADVITIETSRSDMELLEFFKE-FKYPNDIGPGVYDIHSPNIPSIEWIMTLLRQAMHYIPVKRLWVNPDCGLKTRTWDETYYSLENMVRAAKILRKKL 756          
BLAST of BQ623282 vs. ExPASy Swiss-Prot
Match: METE_VIBHA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Vibrio harveyi GN=metE PE=3 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 1.355e-43
Identity = 88/154 (57.14%), Postives = 108/154 (70.13%), Query Frame = 2
Query:    2 ALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQL 463
            A+REGLPL+K +H  YL WAV +F+I     +  TQIHTHMCYS FN+II S+  +DADVITIE SRS+ +LL  F E   Y   IGPGVYDIHSP IPS E I + I K    +    LWVNPDCGLKTR ++E + AL+N+V+AAK LR +L
Sbjct:  607 AIREGLPLKKRDHKAYLQWAVDAFKIAAASAKPETQIHTHMCYSEFNEIIDSVAALDADVITIETSRSNMELLKAF-EDFNYPNEIGPGVYDIHSPNIPSEEWIEELIKKAAEKIPAQRLWVNPDCGLKTRNWSETEAALANLVSAAKKLRAEL 759          
BLAST of BQ623282 vs. ExPASy Swiss-Prot
Match: METE_CHRSD (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=metE PE=3 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 1.355e-43
Identity = 90/151 (59.60%), Postives = 107/151 (70.86%), Query Frame = 2
Query:    2 ALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLR 454
            ALREGLPLR+ E   YLDWAV SF+++    +D TQIHTHMCYS FNDII +I  +DADVITIE SRSD +LL  F++   Y   IGPGVYDIHSP IP  E +   + K    +    LWVNPDCGLKTR + EV+PAL+NMV AA+ LR
Sbjct:  608 ALREGLPLRQGEWQEYLDWAVKSFKLSAAVARDETQIHTHMCYSEFNDIIAAIAALDADVITIETSRSDMELLDAFQD-FAYPNEIGPGVYDIHSPNIPEVEWMVSLMEKAAEKIPAERLWVNPDCGLKTRGWAEVEPALANMVEAARELR 757          
BLAST of BQ623282 vs. ExPASy Swiss-Prot
Match: METE_BUCCC (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Buchnera aphidicola subsp. Cinara cedri GN=metE PE=3 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 1.355e-43
Identity = 89/153 (58.17%), Postives = 107/153 (69.93%), Query Frame = 2
Query:    2 ALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQ 460
            ALREGLPLR  E   YL WAV SF+I + GV+++TQIHTHMCY  FNDI+ +I+D+DADVITIE SRSD +LL  F+   KY   IGPGVYDIHSP IPS + I   + K L  +    LWVNPDCGLKTR +TE   AL NM+ A   +R +
Sbjct:  605 ALREGLPLRTHEWNNYLRWAVKSFKICSSGVKNSTQIHTHMCYCEFNDIMPAIVDLDADVITIETSRSDMELLEFFKT-FKYPNAIGPGVYDIHSPNIPSVQSIEKLLKKALKYISIQQLWVNPDCGLKTRNWTETSLALQNMLQATLNIRKE 756          
The following BLAST results are available for this feature:
BLAST of BQ623282 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 274
Match NameE-valueIdentityDescription
METE_SHEON1.037e-4359.095-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_PSEE41.037e-4359.605-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_HAEIN1.037e-4356.775-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_HAEIG1.037e-4356.775-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_HAEIE1.037e-4356.775-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BURXL1.037e-4357.695-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BUCBP1.037e-4359.095-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_VIBHA1.355e-4357.145-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_CHRSD1.355e-4359.605-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BUCCC1.355e-4358.175-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00373 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00373 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623282 ID=BQ623282; Name=BQ623282; organism=Citrus sinensis; type=EST; length=626bp
TGCCTTGAGGGAAGGATTGCCTCTTAGGAAATCTGAGCATGCTTTCTACT
TGGACTGGGCAGTCCACTCCTTCAGAATCACCAACTGTGGCGTCCAGGAC
ACTACCCAGATCCACACCCACATGTGCTACTCCAACTTCAACGACATTAT
CCACTCAATTATCGACATGGATGCTGATGTGATCACCATTGAGAACTCTC
GTTCTGATGAGAAGCTCCTGTCTGTCTTCCGTGAGGGAGTCAAGTATGGT
GCTGGAATTGGCCCTGGTGTGTATGACATCCACTCTCCAAGAATACCATC
AACTGAAGAAATTGCTGACAGAATCAACAAGATGCTTGCTGTGCTAGAAA
CCAACATTTTGTGGGTTAACCCTGACTGTGGTCTTAAGACTCGCAAGTAC
ACTGAGGTGAAGCCAGCCCTCTCAAACATGGTCGCTGCTGCCAAGCTACT
CCGCACCCAGCTTGCCAGTGCCAAGTGAGTGGTTCTGGAGATTGGAGGGA
TACTTCCTGAGCCATTGATTTTTTTTTTTTTCACTTTAAACAAAGAAAGA
AAATTCCTGTCTTATTACCTATTCAAATACTGGGGGTCCGGAAGGGATGA
AATTTTCCCTATGCATATATGCACTA
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