BQ623282

Overview
NameBQ623282
Unique NameBQ623282
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length626
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9752 contig Csv1_Contig9752:361..985. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623282 vs. ExPASy Swiss-Prot
Match: METE_AERS4 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Aeromonas salmonicida (strain A449) GN=metE PE=3 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 1.355e-43
Identity = 91/155 (58.71%), Postives = 108/155 (69.68%), Query Frame = 2
Query:    2 ALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLA 466
            A+REGLPLRK +H  YLDWAV +FR++   V D+TQIHTHMCYS+FN II ++  +DADVITIE SRS  +LL  F E   Y   IGPGVYDIHSP +PS   I D I K    +  + LWVNPDCGLKTR + E + AL  MV A K LRT+LA
Sbjct:  601 AIREGLPLRKQDHQAYLDWAVRAFRLSASPVVDSTQIHTHMCYSDFNLIIEAVAALDADVITIETSRSQMQLLEAF-ERFNYPNEIGPGVYDIHSPNVPSQGWIEDLIRKAAKQIPADRLWVNPDCGLKTRGWEETEAALKVMVNATKALRTELA 754          
BLAST of BQ623282 vs. ExPASy Swiss-Prot
Match: METE_VIBCH (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Vibrio cholerae GN=metE PE=3 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 1.769e-43
Identity = 88/153 (57.52%), Postives = 107/153 (69.93%), Query Frame = 2
Query:    2 ALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQ 460
            A+REGLPL+K +H  YLDWAV +F+I+    +  TQIHTHMCYS FN+II S+  +DADVITIE SRS+ +LL  F E   Y   IGPGVYDIHSP IP+   I D + K    +    LWVNPDCGLKTR + EV+ AL+NMV AAK LR +
Sbjct:  607 AIREGLPLKKRDHQTYLDWAVQAFKISAGSARPETQIHTHMCYSEFNEIIESVAALDADVITIETSRSNMELLKAFEE-FNYPNEIGPGVYDIHSPNIPAQAWIEDLLRKAAEKIPAQRLWVNPDCGLKTRNWPEVEAALTNMVNAAKALRAE 758          
BLAST of BQ623282 vs. ExPASy Swiss-Prot
Match: METE_NITEU (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Nitrosomonas europaea GN=metE PE=3 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 1.769e-43
Identity = 86/154 (55.84%), Postives = 108/154 (70.13%), Query Frame = 2
Query:    2 ALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQL 463
            A REGLPLRK +   YLDWAV +FR+ + GV+D TQIHTHMCYS F+DI+ +I ++DADVITIE SRS  +LL  F +   Y   IGPGVYDIHSPR+P   E+ + + K    ++  +LWVNPDCGLKTR + E + AL  MV  AK LR+ L
Sbjct:  604 AFREGLPLRKQDWKSYLDWAVKAFRVASSGVKDETQIHTHMCYSEFHDILPAIAELDADVITIETSRSRMELLDAFVK-FSYPNEIGPGVYDIHSPRVPDASEMFELLKKASRYIDPTLLWVNPDCGLKTRNWPETQTALQKMVDCAKTLRSAL 756          
BLAST of BQ623282 vs. ExPASy Swiss-Prot
Match: METE_VIBHB (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=metE PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 2.311e-43
Identity = 88/155 (56.77%), Postives = 109/155 (70.32%), Query Frame = 2
Query:    2 ALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLA 466
            A+REGLPL+K +H  YL WAV +F+I+    +  TQIHTHMCYS FN+II S+  +DADVITIE SRS+ +LL  F E   Y   IGPGVYDIHSP IP+ E I   + K    +    LWVNPDCGLKTR + E + AL+N+V+AAK LRT+LA
Sbjct:  607 AIREGLPLKKRDHDAYLQWAVDAFKISAASAKPETQIHTHMCYSEFNEIIDSVAALDADVITIETSRSNMELLKAF-EAFNYPNEIGPGVYDIHSPNIPTQEWIEALLKKAAEKVPVQRLWVNPDCGLKTRNWDETEAALANLVSAAKKLRTELA 760          
BLAST of BQ623282 vs. ExPASy Swiss-Prot
Match: METE_NITOC (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=metE PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 2.311e-43
Identity = 90/152 (59.21%), Postives = 106/152 (69.74%), Query Frame = 2
Query:    2 ALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRT 457
            A REGLPLR+ E   YL WAV  FR+ + GV+D TQIHTHMCYS FNDIIH+I  +DADVITIE SRSD +LL+ F    +Y   IGPGVYDIHSP +P+  +I   I K    +    LWVNPDCGLKTR + EV+ AL  MVAAA  LR+
Sbjct:  607 AFREGLPLRRVEWESYLAWAVRCFRVASSGVEDGTQIHTHMCYSEFNDIIHAIAALDADVITIETSRSDGELLAAF-AAFEYPNEIGPGVYDIHSPVVPTEAQIVGLIKKAAEYIPAERLWVNPDCGLKTRAWPEVETALRTMVAAAHGLRS 757          
BLAST of BQ623282 vs. ExPASy Swiss-Prot
Match: METE_METCA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Methylococcus capsulatus GN=metE PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 2.311e-43
Identity = 86/151 (56.95%), Postives = 107/151 (70.86%), Query Frame = 2
Query:    2 ALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLR 454
            A REGLPL+ ++ A YLDWAV +FR+ +CGV D TQIHTHMCYS F DI+ +I ++DADVITIE  RS   LL  F     Y   IGPGVYDIHSPR+P+  EI   + K  A ++   LWVNPDCGLKTR++ E + AL+NMV AA+ +R
Sbjct:  603 AFREGLPLKAADRADYLDWAVKAFRLASCGVADDTQIHTHMCYSEFGDILPAIAELDADVITIETCRSAMDLLEAF-GAFGYPNDIGPGVYDIHSPRVPAGAEIRALLEKAAAAVDPERLWVNPDCGLKTRQWPEAEQALANMVEAARAMR 752          
BLAST of BQ623282 vs. ExPASy Swiss-Prot
Match: METE_BURPP (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Burkholderia phytofirmans (strain DSM 17436 / PsJN) GN=metE PE=3 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 3.018e-43
Identity = 90/156 (57.69%), Postives = 107/156 (68.59%), Query Frame = 2
Query:    2 ALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLAS 469
            A REGLPLR+ + A YL+WA   FRI+  GV D TQIHTHMCYS FNDI+ SI  MDADVITIE SRS  +LL  F     Y   IGPGVYDIHSPR+P  + +   + +   V+    LWVNPDCGLKTR + E + AL+NMV AAK LR +LA+
Sbjct:  602 AFREGLPLRRGDWAAYLEWATRVFRISAAGVADQTQIHTHMCYSEFNDILPSIAAMDADVITIETSRSAMELLDGF-GAFAYPNEIGPGVYDIHSPRVPDAQAMQRLLERACEVIPAERLWVNPDCGLKTRGWPETEAALTNMVRAAKALRAKLAA 756          
BLAST of BQ623282 vs. ExPASy Swiss-Prot
Match: METE_BACP2 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bacillus pumilus (strain SAFR-032) GN=metE PE=3 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 3.018e-43
Identity = 90/155 (58.06%), Postives = 112/155 (72.26%), Query Frame = 2
Query:    2 ALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLA 466
            ALREGLPL++S+ A YL+WA  SFR++   VQ+ TQIHTHMCYSNF DI+ +I D+DADVITIE+SRS    L  + E   Y  G+G GVYDIHSPR+PS EE++  I+  L V  T+  WVNPDCGLKTR+  E   AL NMV AA++ R +LA
Sbjct:  606 ALREGLPLKESDWADYLNWAAESFRLSTSSVQNETQIHTHMCYSNFEDIVDTIEDLDADVITIEHSRSHGGFLD-YLEKHPYLKGLGLGVYDIHSPRVPSVEEMSQIIDDALNVCPTDRFWVNPDCGLKTRQEPETIAALKNMVTAAEVARKKLA 759          
BLAST of BQ623282 vs. ExPASy Swiss-Prot
Match: METE_HAES2 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Haemophilus somnus (strain 2336) GN=metE PE=3 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 3.941e-43
Identity = 87/155 (56.13%), Postives = 111/155 (71.61%), Query Frame = 2
Query:    2 ALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLA 466
            A+REGLPL++++   YL WA  +FR+++ GV D TQIHTHMCYS FNDI+ +I  +DADVITIE SRSD +LL+ F +  KY   IGPGVYDIHSPR+P+ EEI   + K L V+    LWVNPDCGLKTR ++E    L  M++  K LR +LA
Sbjct:  604 AIREGLPLKRADWDTYLQWAGEAFRLSSMGVADDTQIHTHMCYSEFNDILPAIAALDADVITIETSRSDMELLTAFGD-FKYPNDIGPGVYDIHSPRVPTAEEIEHLLRKALNVVPKERLWVNPDCGLKTRGWSETIAQLEVMMSVTKKLRAELA 757          
BLAST of BQ623282 vs. ExPASy Swiss-Prot
Match: METE_HAES1 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Haemophilus somnus (strain 129Pt) GN=metE PE=3 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 3.941e-43
Identity = 87/155 (56.13%), Postives = 111/155 (71.61%), Query Frame = 2
Query:    2 ALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLA 466
            A+REGLPL++++   YL WA  +FR+++ GV D TQIHTHMCYS FNDI+ +I  +DADVITIE SRSD +LL+ F +  KY   IGPGVYDIHSPR+P+ EEI   + K L V+    LWVNPDCGLKTR ++E    L  M++  K LR +LA
Sbjct:  604 AIREGLPLKRADWDTYLQWAGEAFRLSSMGVADDTQIHTHMCYSEFNDILPAIAALDADVITIETSRSDMELLTAFGD-FKYPNDIGPGVYDIHSPRVPTAEEIEHLLRKALNVVPKERLWVNPDCGLKTRGWSETIAQLEVMMSVTKKLRAELA 757          
The following BLAST results are available for this feature:
BLAST of BQ623282 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 274
Match NameE-valueIdentityDescription
METE_AERS41.355e-4358.715-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_VIBCH1.769e-4357.525-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_NITEU1.769e-4355.845-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_VIBHB2.311e-4356.775-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_NITOC2.311e-4359.215-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_METCA2.311e-4356.955-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BURPP3.018e-4357.695-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BACP23.018e-4358.065-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_HAES23.941e-4356.135-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_HAES13.941e-4356.135-methyltetrahydropteroyltriglutamate--homocystein... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_00373 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00373 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623282 ID=BQ623282; Name=BQ623282; organism=Citrus sinensis; type=EST; length=626bp
TGCCTTGAGGGAAGGATTGCCTCTTAGGAAATCTGAGCATGCTTTCTACT
TGGACTGGGCAGTCCACTCCTTCAGAATCACCAACTGTGGCGTCCAGGAC
ACTACCCAGATCCACACCCACATGTGCTACTCCAACTTCAACGACATTAT
CCACTCAATTATCGACATGGATGCTGATGTGATCACCATTGAGAACTCTC
GTTCTGATGAGAAGCTCCTGTCTGTCTTCCGTGAGGGAGTCAAGTATGGT
GCTGGAATTGGCCCTGGTGTGTATGACATCCACTCTCCAAGAATACCATC
AACTGAAGAAATTGCTGACAGAATCAACAAGATGCTTGCTGTGCTAGAAA
CCAACATTTTGTGGGTTAACCCTGACTGTGGTCTTAAGACTCGCAAGTAC
ACTGAGGTGAAGCCAGCCCTCTCAAACATGGTCGCTGCTGCCAAGCTACT
CCGCACCCAGCTTGCCAGTGCCAAGTGAGTGGTTCTGGAGATTGGAGGGA
TACTTCCTGAGCCATTGATTTTTTTTTTTTTCACTTTAAACAAAGAAAGA
AAATTCCTGTCTTATTACCTATTCAAATACTGGGGGTCCGGAAGGGATGA
AATTTTCCCTATGCATATATGCACTA
back to top