BQ623282

Overview
NameBQ623282
Unique NameBQ623282
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length626
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9752 contig Csv1_Contig9752:361..985. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623282 vs. ExPASy Swiss-Prot
Match: METE_BAUCH (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Baumannia cicadellinicola subsp. Homalodisca coagulata GN=metE PE=3 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 3.941e-43
Identity = 90/153 (58.82%), Postives = 107/153 (69.93%), Query Frame = 2
Query:    2 ALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQ 460
            ALREGLPL+ S    YL WAV +FR+     ++ TQIHTHMCYS FNDI+ SII MDADVITIE SRS+ KLL  F++  +Y   IGPGVYDIHSP IPS ++I   + K   V+    LWVNPDCGLKTR + E + ALSNMV AA  LR +
Sbjct:  607 ALREGLPLKYSAWKEYLTWAVEAFRLNAAVAKNNTQIHTHMCYSEFNDIMDSIIAMDADVITIETSRSNMKLLDTFKQ-YQYPNDIGPGVYDIHSPNIPSEDDIIQLLRKAAQVIPIKRLWVNPDCGLKTRTWLETRKALSNMVNAAHKLRRE 758          
BLAST of BQ623282 vs. ExPASy Swiss-Prot
Match: METE_RALPJ (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Ralstonia pickettii (strain 12J) GN=metE PE=3 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 5.147e-43
Identity = 88/158 (55.70%), Postives = 110/158 (69.62%), Query Frame = 2
Query:    2 ALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLASAK 475
            A REGLPLR S+   YL+WA  +FR++  GV++ TQIHTHMCYS FNDI+ +I  MDADVITIE SRS+ +LL  F E   Y   IGPGVYDIHSPR+P  +E+   ++K   V+    LWVNPDCGLKTR + EV+ AL  +V A   LR + A+AK
Sbjct:  606 AFREGLPLRASDVPTYLEWAARAFRVSASGVRNDTQIHTHMCYSEFNDILPAIASMDADVITIETSRSNMELLDAFAE-FAYPNEIGPGVYDIHSPRVPRVDEMESLLDKAAQVVPVQRLWVNPDCGLKTRGWPEVEAALQGIVEATHRLRAKHANAK 762          
BLAST of BQ623282 vs. ExPASy Swiss-Prot
Match: METE_CHRVO (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Chromobacterium violaceum GN=metE PE=3 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 5.147e-43
Identity = 89/157 (56.69%), Postives = 111/157 (70.70%), Query Frame = 2
Query:    2 ALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLASA 472
            A+REGLPL+++    YL WA  +FR+++ GV D TQIHTHMCYS F DI+ +I  +DADVITIE SRSD  LL+ F    +Y   IGPGVYDIHSPR+PS  EI   ++K L V+    LWVNPDCGLKTR + EV+ AL+ MVA  + LR +LA A
Sbjct:  604 AIREGLPLKRAGRDVYLAWAGEAFRLSSRGVDDATQIHTHMCYSEFGDILPAIAALDADVITIETSRSDMALLADFGR-FRYPNAIGPGVYDIHSPRVPSAAEIRALLDKALRVIPAERLWVNPDCGLKTRGWPEVEAALAAMVAVGRELREKLAQA 759          
BLAST of BQ623282 vs. ExPASy Swiss-Prot
Match: METE_BUCAP (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Buchnera aphidicola subsp. Schizaphis graminum GN=metE PE=3 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 5.147e-43
Identity = 89/154 (57.79%), Postives = 110/154 (71.43%), Query Frame = 2
Query:    2 ALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQL 463
            ALREGLPLRKS    YL WAV +FR+++ GV++TTQIHTHMCY  F+DI+H+I  +DADVITIE +RSD +LL  F+   KY   IGPGVYDIHS  IPS   I   +NK +A +    +WVNPDCGLKTR + E   AL NMV AAK +R ++
Sbjct:  601 ALREGLPLRKSLWNEYLSWAVDAFRLSSSGVKNTTQIHTHMCYCEFHDIMHAISFLDADVITIETARSDMELLKSFKT-FKYPNEIGPGVYDIHSSNIPSITSIKFLLNKAIAYIPVERIWVNPDCGLKTRNWNETILALKNMVCAAKEMRDKI 753          
BLAST of BQ623282 vs. ExPASy Swiss-Prot
Match: METE_RALSO (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Ralstonia solanacearum GN=metE PE=3 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 6.723e-43
Identity = 89/157 (56.69%), Postives = 108/157 (68.79%), Query Frame = 2
Query:    2 ALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLASA 472
            A REGLPLR  + A YL+WA   FR++  GV++ TQIHTHMCYS FNDI+ +I  MDADVITIE SRS+ +LL  F E   Y   IGPGVYDIHSPR+P  EE+   ++K   V+    LWVNPDCGLKTR + EV+ AL  MV A + LR + A A
Sbjct:  603 AFREGLPLRAGDVAVYLEWAARVFRVSASGVRNDTQIHTHMCYSEFNDILPAIASMDADVITIETSRSNMELLDAFGE-FAYPNEIGPGVYDIHSPRVPRVEEMEALLDKAAQVVPVQRLWVNPDCGLKTRGWPEVEAALRGMVEATRRLRARHAGA 758          
BLAST of BQ623282 vs. ExPASy Swiss-Prot
Match: METE_BORPE (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bordetella pertussis GN=metE PE=3 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 6.723e-43
Identity = 88/151 (58.28%), Postives = 105/151 (69.54%), Query Frame = 2
Query:    2 ALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLR 454
            A+REGLPLR+++   YLDWAV  FR++  GV + TQIHTHMCYS FNDII SI  MDADVITIE SRS+ +LL  F E   Y   IGPGVYDIHSP +P  + + + + K  A L    LWVNPDCGLKTR + E + AL  MV AA+ LR
Sbjct:  613 AIREGLPLRRADWRAYLDWAVDCFRLSTAGVGEATQIHTHMCYSEFNDIIESIAAMDADVITIETSRSNMELLKAF-EDFHYPNDIGPGVYDIHSPNVPEVDWMVELMRKAAARLPKERLWVNPDCGLKTRAWPETEAALIGMVQAARTLR 762          
BLAST of BQ623282 vs. ExPASy Swiss-Prot
Match: METE_BORPA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bordetella parapertussis GN=metE PE=3 SV=2)

HSP 1 Score: 173.711 bits (439), Expect = 6.723e-43
Identity = 88/151 (58.28%), Postives = 105/151 (69.54%), Query Frame = 2
Query:    2 ALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLR 454
            A+REGLPLR+++   YLDWAV  FR++  GV + TQIHTHMCYS FNDII SI  MDADVITIE SRS+ +LL  F E   Y   IGPGVYDIHSP +P  + + + + K  A L    LWVNPDCGLKTR + E + AL  MV AA+ LR
Sbjct:  613 AIREGLPLRRADWRAYLDWAVDCFRLSTAGVGEATQIHTHMCYSEFNDIIESIAAMDADVITIETSRSNMELLKAF-EDFHYPNDIGPGVYDIHSPNVPEVDWMVELMRKAAARLPKERLWVNPDCGLKTRAWPETEAALIGMVQAARTLR 762          
BLAST of BQ623282 vs. ExPASy Swiss-Prot
Match: METE_BORBR (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bordetella bronchiseptica GN=metE PE=3 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 6.723e-43
Identity = 88/151 (58.28%), Postives = 105/151 (69.54%), Query Frame = 2
Query:    2 ALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLR 454
            A+REGLPLR+++   YLDWAV  FR++  GV + TQIHTHMCYS FNDII SI  MDADVITIE SRS+ +LL  F E   Y   IGPGVYDIHSP +P  + + + + K  A L    LWVNPDCGLKTR + E + AL  MV AA+ LR
Sbjct:  613 AIREGLPLRRADWRAYLDWAVDCFRLSTAGVGEATQIHTHMCYSEFNDIIESIAAMDADVITIETSRSNMELLKAF-EDFHYPNDIGPGVYDIHSPNVPEVDWMVELMRKAAARLPKERLWVNPDCGLKTRAWPETEAALIGMVQAARTLR 762          
BLAST of BQ623282 vs. ExPASy Swiss-Prot
Match: METE_BORA1 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bordetella avium (strain 197N) GN=metE PE=3 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 6.723e-43
Identity = 89/151 (58.94%), Postives = 105/151 (69.54%), Query Frame = 2
Query:    2 ALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLR 454
            A+REGLPLR+++   YLDWAV  FR++  GV D TQIHTHMCYS FNDII SI  MDADVITIE SRS+ +LL  F E   Y   IGPGVYDIHSP +P  + +   + K  A L    LWVNPDCGLKTR + E + AL +MV AA+ LR
Sbjct:  613 AIREGLPLRRADWQAYLDWAVDCFRLSTAGVADDTQIHTHMCYSEFNDIIESIAAMDADVITIETSRSNMELLKAF-EDFHYPNDIGPGVYDIHSPNVPDVDWMVGLMQKAGANLSKERLWVNPDCGLKTRAWPETEAALISMVQAARTLR 762          
BLAST of BQ623282 vs. ExPASy Swiss-Prot
Match: METE_PELCD (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=metE PE=3 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 8.780e-43
Identity = 91/151 (60.26%), Postives = 105/151 (69.54%), Query Frame = 2
Query:    2 ALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLR 454
            ALREGLPLRKS    YL WAV +FR+T  GV D+TQIHTHMCYS FN I   I  MDADVI+IE SRS+ +LL V  E   Y   IGPGVYDIHSPR+PS  E+ + + K   V+    LWVNPDCGLKTR + E   +L NMVAAA+ LR
Sbjct:  604 ALREGLPLRKSAWREYLGWAVDAFRLTASGVADSTQIHTHMCYSEFNHIAEWIAKMDADVISIEASRSNMELLGVL-ESFTYPNDIGPGVYDIHSPRVPSVAEMVELLRKASEVIPLERLWVNPDCGLKTRAWPETLASLRNMVAAAQKLR 753          
The following BLAST results are available for this feature:
BLAST of BQ623282 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 274
Match NameE-valueIdentityDescription
METE_BAUCH3.941e-4358.825-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_RALPJ5.147e-4355.705-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_CHRVO5.147e-4356.695-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BUCAP5.147e-4357.795-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_RALSO6.723e-4356.695-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BORPE6.723e-4358.285-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BORPA6.723e-4358.285-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BORBR6.723e-4358.285-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BORA16.723e-4358.945-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_PELCD8.780e-4360.265-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00373 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00373 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623282 ID=BQ623282; Name=BQ623282; organism=Citrus sinensis; type=EST; length=626bp
TGCCTTGAGGGAAGGATTGCCTCTTAGGAAATCTGAGCATGCTTTCTACT
TGGACTGGGCAGTCCACTCCTTCAGAATCACCAACTGTGGCGTCCAGGAC
ACTACCCAGATCCACACCCACATGTGCTACTCCAACTTCAACGACATTAT
CCACTCAATTATCGACATGGATGCTGATGTGATCACCATTGAGAACTCTC
GTTCTGATGAGAAGCTCCTGTCTGTCTTCCGTGAGGGAGTCAAGTATGGT
GCTGGAATTGGCCCTGGTGTGTATGACATCCACTCTCCAAGAATACCATC
AACTGAAGAAATTGCTGACAGAATCAACAAGATGCTTGCTGTGCTAGAAA
CCAACATTTTGTGGGTTAACCCTGACTGTGGTCTTAAGACTCGCAAGTAC
ACTGAGGTGAAGCCAGCCCTCTCAAACATGGTCGCTGCTGCCAAGCTACT
CCGCACCCAGCTTGCCAGTGCCAAGTGAGTGGTTCTGGAGATTGGAGGGA
TACTTCCTGAGCCATTGATTTTTTTTTTTTTCACTTTAAACAAAGAAAGA
AAATTCCTGTCTTATTACCTATTCAAATACTGGGGGTCCGGAAGGGATGA
AATTTTCCCTATGCATATATGCACTA
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