BQ623282

Overview
NameBQ623282
Unique NameBQ623282
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length626
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9752 contig Csv1_Contig9752:361..985. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623282 vs. ExPASy Swiss-Prot
Match: METE_CAUCR (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Caulobacter crescentus GN=metE PE=3 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 8.780e-43
Identity = 90/151 (59.60%), Postives = 105/151 (69.54%), Query Frame = 2
Query:    2 ALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLR 454
            ALREGLPLR+ +   YLDWAV SFR+   GV D TQIHTHMCYS FNDII +I  MDADVI+IE +RS  +LL  F  G  Y A IGPGVYDIHSPR+P+ EE+   +      L    LWVNPDCGLKTRK+ E + A+ NMV AA+  R
Sbjct:  626 ALREGLPLRRGDWDAYLDWAVESFRLAASGVADATQIHTHMCYSEFNDIIAAIGAMDADVISIETARSKMELLDAF-VGYAYPAQIGPGVYDIHSPRVPAVEEMTTLLAAARQRLAGEQLWVNPDCGLKTRKWPETQAAIVNMVEAARRAR 775          
BLAST of BQ623282 vs. ExPASy Swiss-Prot
Match: METE_BIFAA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083) GN=metE PE=3 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 8.780e-43
Identity = 88/156 (56.41%), Postives = 110/156 (70.51%), Query Frame = 2
Query:    2 ALREGLPLRKSE-HAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLA 466
            ALRE LPLRK++ H  YLDWA+ +FR+ +  V+ TTQIHTHMCYS FNDII  I  MDADVI+ E SR D  +L    +   +    GPGVYDIHSPRIPS +EI DRI ++L  ++   +W+NPDCGLKTR   E  P+L N+VAAAK +R +LA
Sbjct:  613 ALREKLPLRKTDWHKKYLDWAIPAFRLVHSAVKPTTQIHTHMCYSEFNDIIKDIDAMDADVISFEASRGDLVVLDAIHDA-NFETEAGPGVYDIHSPRIPSEQEIEDRIYEILKKMDVEKVWINPDCGLKTRGNAETWPSLENLVAAAKAVRAKLA 767          
BLAST of BQ623282 vs. ExPASy Swiss-Prot
Match: METE_BACHD (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bacillus halodurans GN=metE PE=3 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 8.780e-43
Identity = 87/154 (56.49%), Postives = 110/154 (71.43%), Query Frame = 2
Query:    2 ALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQL 463
            A+REGLPL+  +   YLDWAV +FR +   V+ TTQIHTHMCYS F+++I +I D+DADVI+IE SRS  +++S F E   Y  GIG GVYDIHSPR+PS EE+ + I + L VL  ++ WVNPDCGLKTR   E   AL NMVAAA+  R +L
Sbjct:  600 AIREGLPLKAEDQQEYLDWAVSAFRASCAHVKATTQIHTHMCYSEFHEMIEAIDDLDADVISIETSRSHGEMISAF-EKTTYEKGIGLGVYDIHSPRVPSEEEMLNVIRRALTVLPASLFWVNPDCGLKTRAEKETVAALKNMVAAARAAREEL 752          
BLAST of BQ623282 vs. ExPASy Swiss-Prot
Match: METE_SERP5 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Serratia proteamaculans (strain 568) GN=metE PE=3 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.147e-42
Identity = 89/155 (57.42%), Postives = 108/155 (69.68%), Query Frame = 2
Query:    2 ALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLA 466
            ALREGLPLR+S+ A YL+WAV +F++     +D TQIHTHMCY  FNDI+ SI  +DADVITIE SRSD  LL  F+E  +Y   IGPGVYDIHSP +PS E I   + K    +    LWVNPDCGLKTR + E + +L+NMV AA+ LR Q A
Sbjct:  605 ALREGLPLRQSDWAAYLNWAVDAFKLNAAVAKDDTQIHTHMCYCEFNDIMDSIAALDADVITIETSRSDMDLLEAFKE-FEYPNEIGPGVYDIHSPNVPSVEWIEALLRKAAQNIPAERLWVNPDCGLKTRGWPETRQSLANMVLAAQRLREQQA 758          
BLAST of BQ623282 vs. ExPASy Swiss-Prot
Match: METE_NEIG1 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090) GN=metE PE=3 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.147e-42
Identity = 85/155 (54.84%), Postives = 110/155 (70.97%), Query Frame = 2
Query:    2 ALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLA 466
            A+REGLPL++++   YL+WA  SFR+++ G +D+TQIHTHMCYS FNDI+ +I  MDADVITIE SRSD +LL+ F E  KY   IGPGVYDIHSPR+P+  E+   + K + V+    LWVNPDCGLKTR + E    L  M+   + LR +LA
Sbjct:  604 AIREGLPLKRADWDAYLNWAGESFRLSSAGCEDSTQIHTHMCYSEFNDILPAIAAMDADVITIETSRSDMELLAAFGE-FKYPNDIGPGVYDIHSPRVPTEAEVEHLLRKAIEVVPVERLWVNPDCGLKTRGWKETLEQLQVMMNVTRKLRAELA 757          
BLAST of BQ623282 vs. ExPASy Swiss-Prot
Match: METE_ERWT9 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=metE PE=3 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.147e-42
Identity = 89/151 (58.94%), Postives = 106/151 (70.20%), Query Frame = 2
Query:    2 ALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLR 454
            ALREGLPL +S+   YL+WAV +FR+     QD TQIHTHMCY  FNDI+ SI  +DADVITIE SRSD +LL  F E  +Y   IGPGVYDIHSP +PS E +   + K    + T  LWVNPDCGLKTR +TE + AL+NMV AA+ LR
Sbjct:  603 ALREGLPLHQSDWGAYLEWAVDAFRLNAAVAQDDTQIHTHMCYCEFNDIMDSIAALDADVITIETSRSDMELLESFEE-FEYPNEIGPGVYDIHSPNVPSVEWVEALLLKAAQRIPTERLWVNPDCGLKTRGWTETRQALANMVKAAQNLR 752          
BLAST of BQ623282 vs. ExPASy Swiss-Prot
Match: METE_BIFLO (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bifidobacterium longum GN=metE PE=3 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.147e-42
Identity = 89/155 (57.42%), Postives = 109/155 (70.32%), Query Frame = 2
Query:    2 ALREGLPLRKSE-HAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQL 463
            ALRE LPLRKS+ H  YLDWAV +FR+ +  V+ TTQIHTHMCYS FNDII  I  MDADVI+ E SR D  +L    +   +    GPGVYDIHSPRIPS +EI DRI ++L  ++   +W+NPDCGLKTR   E  P+L N+VAAAK +R +L
Sbjct:  612 ALREKLPLRKSDWHVKYLDWAVPAFRLVHSAVKPTTQIHTHMCYSEFNDIIRDIDAMDADVISFEASRGDLVVLDAIHDA-HFETEAGPGVYDIHSPRIPSEKEIEDRIYEILDKMDVKKVWINPDCGLKTRGNAETWPSLENLVAAAKAVRAKL 765          
BLAST of BQ623282 vs. ExPASy Swiss-Prot
Match: METE_BIFLI (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / NCTC 11817 / S12) GN=metE PE=3 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.147e-42
Identity = 88/155 (56.77%), Postives = 111/155 (71.61%), Query Frame = 2
Query:    2 ALREGLPLRKSE-HAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQL 463
            ALRE LPLRKS+ HA YLDWA+ +FR+ +  V+ TTQIHTHMCYS FNDII  I  MDADVI+ E SR D  +L    +  ++    GPGVYDIHSPRIPS +EI DRI ++L  ++   +W+NPDCGLKTR   E  P+L ++VAAAK +R +L
Sbjct:  612 ALREKLPLRKSDWHAKYLDWAIPAFRLVHSAVKPTTQIHTHMCYSEFNDIIRDIDAMDADVISFEASRGDLVVLDAIHDA-RFETEAGPGVYDIHSPRIPSEKEIEDRIYEILDKIDVKKVWINPDCGLKTRGNDETWPSLEHLVAAAKAVRARL 765          
BLAST of BQ623282 vs. ExPASy Swiss-Prot
Match: METE_BIFLD (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bifidobacterium longum (strain DJO10A) GN=metE PE=3 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.147e-42
Identity = 89/155 (57.42%), Postives = 109/155 (70.32%), Query Frame = 2
Query:    2 ALREGLPLRKSE-HAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQL 463
            ALRE LPLRKS+ H  YLDWAV +FR+ +  V+ TTQIHTHMCYS FNDII  I  MDADVI+ E SR D  +L    +   +    GPGVYDIHSPRIPS +EI DRI ++L  ++   +W+NPDCGLKTR   E  P+L N+VAAAK +R +L
Sbjct:  612 ALREKLPLRKSDWHVKYLDWAVPAFRLVHSAVKPTTQIHTHMCYSEFNDIIRDIDAMDADVISFEASRGDLVVLDAIHDA-HFETEAGPGVYDIHSPRIPSEKEIEDRIYEILDKMDVKKVWINPDCGLKTRGNAETWPSLENLVAAAKAVRAKL 765          
BLAST of BQ623282 vs. ExPASy Swiss-Prot
Match: METE_ALCBS (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=metE PE=3 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.147e-42
Identity = 90/151 (59.60%), Postives = 102/151 (67.55%), Query Frame = 2
Query:    2 ALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLR 454
            ALREGLPLR+ E   YLDWAV  FR+    V D TQIHTHMCYS FNDII +I  +DADVITIE SRS+ +LL  FR+   Y   IGPGVYDIHSP  P    +   + K    L    LWVNPDCGLKTRK+ E + AL+NMV AAK LR
Sbjct:  611 ALREGLPLRQEEWTQYLDWAVDCFRLATVSVDDDTQIHTHMCYSEFNDIIEAIAALDADVITIETSRSNMELLDAFRD-FHYPNDIGPGVYDIHSPNEPDVAWMVQLMEKAAERLPKERLWVNPDCGLKTRKWDETRAALANMVNAAKQLR 760          
The following BLAST results are available for this feature:
BLAST of BQ623282 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 274
Match NameE-valueIdentityDescription
METE_CAUCR8.780e-4359.605-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BIFAA8.780e-4356.415-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BACHD8.780e-4356.495-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_SERP51.147e-4257.425-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_NEIG11.147e-4254.845-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ERWT91.147e-4258.945-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BIFLO1.147e-4257.425-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BIFLI1.147e-4256.775-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BIFLD1.147e-4257.425-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ALCBS1.147e-4259.605-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00373 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00373 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623282 ID=BQ623282; Name=BQ623282; organism=Citrus sinensis; type=EST; length=626bp
TGCCTTGAGGGAAGGATTGCCTCTTAGGAAATCTGAGCATGCTTTCTACT
TGGACTGGGCAGTCCACTCCTTCAGAATCACCAACTGTGGCGTCCAGGAC
ACTACCCAGATCCACACCCACATGTGCTACTCCAACTTCAACGACATTAT
CCACTCAATTATCGACATGGATGCTGATGTGATCACCATTGAGAACTCTC
GTTCTGATGAGAAGCTCCTGTCTGTCTTCCGTGAGGGAGTCAAGTATGGT
GCTGGAATTGGCCCTGGTGTGTATGACATCCACTCTCCAAGAATACCATC
AACTGAAGAAATTGCTGACAGAATCAACAAGATGCTTGCTGTGCTAGAAA
CCAACATTTTGTGGGTTAACCCTGACTGTGGTCTTAAGACTCGCAAGTAC
ACTGAGGTGAAGCCAGCCCTCTCAAACATGGTCGCTGCTGCCAAGCTACT
CCGCACCCAGCTTGCCAGTGCCAAGTGAGTGGTTCTGGAGATTGGAGGGA
TACTTCCTGAGCCATTGATTTTTTTTTTTTTCACTTTAAACAAAGAAAGA
AAATTCCTGTCTTATTACCTATTCAAATACTGGGGGTCCGGAAGGGATGA
AATTTTCCCTATGCATATATGCACTA
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