BQ623285

Overview
NameBQ623285
Unique NameBQ623285
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length632
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623285 vs. ExPASy Swiss-Prot
Match: P2C02_ARATH (Probable protein phosphatase 2C 2 OS=Arabidopsis thaliana GN=At1g07160 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.102e-19
Identity = 54/135 (40.00%), Postives = 77/135 (57.04%), Query Frame = 2
Query:    2 DHKPDRHDELTRVEAAGGRVINWNGP-RILGVLATSRSIGDQYLKPFVISKPDVMVTERSDRDEFLILASDGLWDVVSNEAACQVVRRCFSGRIKWASSVDAGNQNPXXXXXXXXXXXXISRGSSDNISVIVVEL 403
            DH+P R DE  R+E++GG V  +N   RI G LA SR IGD +LK ++IS+P++ +   + + EFLILASDGLWD VSN+ A  + R    G            +              +SRGS D+ISV++++L
Sbjct:  251 DHRPSRDDERNRIESSGGYVDTFNSVWRIQGSLAVSRGIGDAHLKQWIISEPEINILRINPQHEFLILASDGLWDKVSNQEAVDIARPFCKG---------TDQKRKPLLACKKLVDLSVSRGSLDDISVMLIQL 376          
BLAST of BQ623285 vs. ExPASy Swiss-Prot
Match: P2C52_ORYSJ (Probable protein phosphatase 2C 52 OS=Oryza sativa subsp. japonica GN=Os05g0587100 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 5.291e-19
Identity = 58/134 (43.28%), Postives = 75/134 (55.97%), Query Frame = 2
Query:    2 DHKPDRHDELTRVEAAGGRVINWNGP-RILGVLATSRSIGDQYLKPFVISKPDVMVTERSDRDEFLILASDGLWDVVSNEAACQVVRRCFSGRIKWASSVDAGNQNPXXXXXXXXXXXXISRGSSDNISVIVVE 400
            DHKP+R DE  R+E+AGG V+ W G  R+ GVLA SR+ G++ LK FV++ P++   E  D  EFLILASDGLWDVV NE A  +V+                 +               SRGS DNI+ IVV+
Sbjct:  358 DHKPNRSDERKRIESAGG-VVMWAGTWRVGGVLAMSRAFGNRLLKQFVVADPEIQEQEIDDELEFLILASDGLWDVVPNEDAVSLVKI----------------EEEPEAAARKLTETAFSRGSGDNITCIVVK 474          
BLAST of BQ623285 vs. ExPASy Swiss-Prot
Match: P2C32_ORYSJ (Probable protein phosphatase 2C 32 OS=Oryza sativa subsp. japonica GN=Os03g0292100 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 6.911e-19
Identity = 54/137 (39.42%), Postives = 78/137 (56.93%), Query Frame = 2
Query:    2 DHKPDRHDELTRVEAAGGRVINWNGP-RILGVLATSRSIGDQYLKPFVISKPDVMVTERSDRDEFLILASDGLWDVVSNEAACQVVRRCFSGRIKWASSVDAGNQNPXXXXXXXXXXXXISRGSSDNISVIVVELNK 409
            DH+  R DE  R+E  GG V+N+ G  R+ G LA SR IGD +LK +V+S PD        + EFLILASDGLWD V N+ A  + R  +    K AS + A  +              ++RGS+D+IS+++++L +
Sbjct:  262 DHRASREDERERIENLGGFVVNYRGTWRVQGSLAVSRGIGDAHLKQWVVSDPDTTTLGVDSQCEFLILASDGLWDKVENQEAVDIARPLYISNDK-ASRMTACRR---------LVETAVTRGSTDDISIVIIQLQQ 388          
BLAST of BQ623285 vs. ExPASy Swiss-Prot
Match: P2C71_ARATH (Probable protein phosphatase 2C 71 OS=Arabidopsis thaliana GN=At5g24940 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 9.026e-19
Identity = 59/143 (41.26%), Postives = 77/143 (53.85%), Query Frame = 2
Query:    2 DHKPDRHDELTRVEAAGGRVINWNGP-RILGVLATSRSIGDQYLKPFVISKPDVMVTERSDRDEFLILASDGLWDVVSNEAACQVVRRCFSGRIKWASSVDAGNQNPXXXXXXXXXXXXISRGSSDNISVIVVELNKPTKFNS 427
            DHKPD+ DE  R+E AGG V+ W G  R+ GVLA SR+ GD+ LK +V++ P++   +  D  EFLILASDGLWDV SNE A  VV+            V                   I RGS+DNI+ +VV   +    N+
Sbjct:  162 DHKPDQSDERERIENAGGFVM-WAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEKIDDSLEFLILASDGLWDVFSNEEAVAVVKEVEDPEESTKKLVGEA----------------IKRGSADNITCVVVRFLESKSANN 287          
BLAST of BQ623285 vs. ExPASy Swiss-Prot
Match: P2C69_ARATH (Probable protein phosphatase 2C 69 OS=Arabidopsis thaliana GN=At5g10740 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 9.026e-19
Identity = 58/133 (43.61%), Postives = 77/133 (57.89%), Query Frame = 2
Query:    2 DHKPDRHDELTRVEAAGGRVINWNGP-RILGVLATSRSIGDQYLKPFVISKPDVMVTERSDRDEFLILASDGLWDVVSNEAACQVVRRCFSGRIKWASSVDAGNQNPXXXXXXXXXXXXISRGSSDNISVIVV 397
            DHKPD+ DE  R+E AGG V+ W G  R+ GVLA SR+ GD+ LK +V++ P++   +  D  EFLILASDGLWDV SNEAA  +V+                 ++P            I RGS+DNI+ +VV
Sbjct:  162 DHKPDQSDERERIENAGGFVM-WAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEKIDDTLEFLILASDGLWDVFSNEAAVAMVKEV---------------EDP-EDSAKKLVGEAIKRGSADNITCVVV 277          
BLAST of BQ623285 vs. ExPASy Swiss-Prot
Match: P2C30_ARATH (Probable protein phosphatase 2C 30 OS=Arabidopsis thaliana GN=PP2C5 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 2.626e-18
Identity = 58/136 (42.65%), Postives = 75/136 (55.15%), Query Frame = 2
Query:    2 DHKPDRHDELTRVEAAGGRVINWNGP-RILGVLATSRSIGDQYLKPFVISKPDVMVTERSDRDEFLILASDGLWDVVSNEAACQVVRRCFSGRIKWASSVDAGNQNP-XXXXXXXXXXXXISRGSSDNISVIVVEL 403
            DH P + +EL R+EA GG V   NG  RI G LA SR IGD+YLK +VI++P+          EFLILASDGLWD V+N+ A  VVR               G +NP             + RGS D+IS+I+++L
Sbjct:  261 DHNPSQANELKRIEALGGYVDCCNGVWRIQGTLAVSRGIGDRYLKEWVIAEPETRTLRIKPEFEFLILASDGLWDKVTNQEAVDVVR-----------PYCVGVENPMTLSACKKLAELSVKRGSLDDISLIIIQL 385          
BLAST of BQ623285 vs. ExPASy Swiss-Prot
Match: P2C14_ARATH (Probable protein phosphatase 2C 14 OS=Arabidopsis thaliana GN=At1g67820 PE=2 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 2.626e-18
Identity = 48/93 (51.61%), Postives = 61/93 (65.59%), Query Frame = 2
Query:    2 DHKPDRHDELTRVEAAGGRVINWNGP-RILGVLATSRSIGDQYLKPFVISKPDVMVTERSDRDEFLILASDGLWDVVSNEAACQVVRRCFSGR 277
            DHKP R DE  R+E+ GG V N  G  R+ G+LA SRSIGD +LK +V+++P+  V E     EFL+LASDGLWDVVSN+ A   V    + R
Sbjct:  248 DHKPGRDDEKERIESQGGYVDNHQGAWRVQGILAVSRSIGDAHLKKWVVAEPETRVLELEQDMEFLVLASDGLWDVVSNQEAVYTVLHVLAQR 340          
BLAST of BQ623285 vs. ExPASy Swiss-Prot
Match: P2C11_ARATH (Probable protein phosphatase 2C 11 OS=Arabidopsis thaliana GN=At1g43900 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 3.430e-18
Identity = 56/133 (42.11%), Postives = 77/133 (57.89%), Query Frame = 2
Query:    2 DHKPDRHDELTRVEAAGGRVINWNGP-RILGVLATSRSIGDQYLKPFVISKPDVMVTERSDRDEFLILASDGLWDVVSNEAACQVVRRCFSGRIKWASSVDAGNQNPXXXXXXXXXXXXISRGSSDNISVIVV 397
            DHKPDR DE  R+E AGG +I W G  R+ G+LA SR+ GD+ LKP+VI++P++   + S   EF+++ASDGLW+V+SN+ A  +VR            V  G                 +RGS DNI+ IVV
Sbjct:  252 DHKPDRSDERQRIEDAGGFII-WAGTWRVGGILAVSRAFGDKQLKPYVIAEPEIQEEDISTL-EFIVVASDGLWNVLSNKDAVAIVRDISDAETAARKLVQEG----------------YARGSCDNITCIVV 366          
BLAST of BQ623285 vs. ExPASy Swiss-Prot
Match: P2C59_ARATH (Probable protein phosphatase 2C 59 OS=Arabidopsis thaliana GN=WIN2 PE=1 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 4.479e-18
Identity = 58/133 (43.61%), Postives = 75/133 (56.39%), Query Frame = 2
Query:    2 DHKPDRHDELTRVEAAGGRVINWNGP-RILGVLATSRSIGDQYLKPFVISKPDVMVTERSDRDEFLILASDGLWDVVSNEAACQVVRRCFSGRIKWASSVDAGNQNPXXXXXXXXXXXXISRGSSDNISVIVV 397
            DHKPD+ DE  R+E AGG V+ W G  R+ GVLA SR+ GD+ LK +V++ P++   +     EFLILASDGLWDVVSNE A         G IK     + G +                RGS+DNI+ +VV
Sbjct:  162 DHKPDQSDERQRIEDAGGFVM-WAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEKVDSSLEFLILASDGLWDVVSNEEAV--------GMIKAIEDPEEGAKR--------LMMEAYQRGSADNITCVVV 277          
BLAST of BQ623285 vs. ExPASy Swiss-Prot
Match: P2C76_ARATH (Probable protein phosphatase 2C 76 OS=Arabidopsis thaliana GN=At5g53140 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 7.641e-18
Identity = 56/134 (41.79%), Postives = 75/134 (55.97%), Query Frame = 2
Query:    2 DHKPDRHDELTRVEAAGGRVINWNGP-RILGVLATSRSIGDQYLKPFVISKPDVMVTERSDRDEFLILASDGLWDVVSNEAACQVVRRCFSGRIKWASSVDAGNQNPXXXXXXXXXXXXISRGSSDNISVIVVE 400
            DHKP+R DE  R+E+AGG VI W G  R+ GVLA SR+ G++ LK FV+++P++   E     E L+LASDGLWDVV NE A  +                A ++               SRGS+DNI+ IVV+
Sbjct:  230 DHKPNRSDERKRIESAGG-VIMWAGTWRVGGVLAMSRAFGNRMLKQFVVAEPEIQDLEIDHEAELLVLASDGLWDVVPNEDAVAL----------------AQSEEEPEAAARKLTDTAFSRGSADNITCIVVK 346          
The following BLAST results are available for this feature:
BLAST of BQ623285 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 71
Match NameE-valueIdentityDescription
P2C02_ARATH3.102e-1940.00Probable protein phosphatase 2C 2 OS=Arabidopsis t... [more]
P2C52_ORYSJ5.291e-1943.28Probable protein phosphatase 2C 52 OS=Oryza sativa... [more]
P2C32_ORYSJ6.911e-1939.42Probable protein phosphatase 2C 32 OS=Oryza sativa... [more]
P2C71_ARATH9.026e-1941.26Probable protein phosphatase 2C 71 OS=Arabidopsis ... [more]
P2C69_ARATH9.026e-1943.61Probable protein phosphatase 2C 69 OS=Arabidopsis ... [more]
P2C30_ARATH2.626e-1842.65Probable protein phosphatase 2C 30 OS=Arabidopsis ... [more]
P2C14_ARATH2.626e-1851.61Probable protein phosphatase 2C 14 OS=Arabidopsis ... [more]
P2C11_ARATH3.430e-1842.11Probable protein phosphatase 2C 11 OS=Arabidopsis ... [more]
P2C59_ARATH4.479e-1843.61Probable protein phosphatase 2C 59 OS=Arabidopsis ... [more]
P2C76_ARATH7.641e-1841.79Probable protein phosphatase 2C 76 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00376 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00376 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623285 ID=BQ623285; Name=BQ623285; organism=Citrus sinensis; type=EST; length=632bp
TGATCATAAGCCTGACAGACATGATGAACTGACAAGAGTAGAAGCTGCTG
GAGGAAGGGTCATAAACTGGAACGGCCCCCGAATCTTAGGAGTTCTTGCC
ACCTCCAGATCTATAGGCGATCAATACTTGAAACCATTTGTGATATCAAA
GCCAGATGTGATGGTGACTGAAAGAAGCGACCGCGATGAATTCCTCATAC
TTGCTAGCGATGGCTTATGGGATGTTGTATCAAATGAAGCAGCATGCCAA
GTCGTGAGGAGATGTTTCAGCGGCCGGATAAAATGGGCATCCTCCGTCGA
CGCCGGGAACCAAAACCCCGCTGCCAGAGCAGCAGCAGTGCTGGTCGAGC
TAGCCATCTCTCGGGGCAGCAGTGACAATATAAGCGTCATAGTAGTTGAG
CTAAATAAACCTACCAAGTTTAATTCCTAGTGCATCATAAAATTTAATAA
ACAGCAACAGAAGTTCGTTTTCGAAGATTTTAACCATTGTTTTGTTTAGG
TAGAAACCATGTTTTCAATTCAGAAAATGAACCGAGAGCGGCGGGAGCTC
TGTTGAATTGACGAGCTTTTCAGGGGGATTTGTTGGATGTAACATTTAAT
TCATTTGGTCAACTTTAAATTGTTCTTTTTTT
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