BQ623285

Overview
NameBQ623285
Unique NameBQ623285
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length632
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623285 vs. ExPASy Swiss-Prot
Match: P2C25_ARATH (Probable protein phosphatase 2C 25 OS=Arabidopsis thaliana GN=At2g30020 PE=1 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 9.979e-18
Identity = 56/138 (40.58%), Postives = 75/138 (54.35%), Query Frame = 2
Query:    2 DHKPDRHDELTRVEAAGGRVINWNGP-RILGVLATSRSIGDQYLKPFVISKPDVMVTERSDRDEFLILASDGLWDVVSNEAACQVVRRCFSGRIKWASSVDAGNQNP-XXXXXXXXXXXXISRGSSDNISVIVVELNK 409
            DH+P R DE  R+E  GG V  ++G  RI G LA SR IGD  LK +VI++P+  ++      EFLILASDGLWD VSN+ A  + R            +  G + P              SRGSSD+ISV+++ L +
Sbjct:  268 DHRPSRDDERKRIETTGGYVDTFHGVWRIQGSLAVSRGIGDAQLKKWVIAEPETKISRIEHDHEFLILASDGLWDKVSNQEAVDIAR-----------PLCLGTEKPLLLAACKKLVDLSASRGSSDDISVMLIPLRQ 394          
BLAST of BQ623285 vs. ExPASy Swiss-Prot
Match: P2C10_ORYSJ (Probable protein phosphatase 2C 10 OS=Oryza sativa subsp. japonica GN=Os02g0149800 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.303e-17
Identity = 58/139 (41.73%), Postives = 77/139 (55.40%), Query Frame = 2
Query:    2 DHKPDRHDELTRVEAAGGRVINWNGP-RILGVLATSRSIGDQYLKPFVISKPDVMVTERSDRDEFLILASDGLWDVVSNEAACQVVRRCFSGRIKWASSVDAGNQNPXXXXXXXXXXXXISRGSSDNISVIVVELNKPT 415
            DHKPD+ DE  R+E AGG V+ W G  R+ GVLA SR+ GD+ LK +V++ P++         EFLILASDGLWDVVSN+ A  +VR                 Q+P              RGS+DNI+V++V   + T
Sbjct:  211 DHKPDQSDERQRIEDAGGFVM-WAGTWRVGGVLAVSRAFGDKLLKQYVVADPEIKEEIVDSSLEFLILASDGLWDVVSNKEAVDMVRPI---------------QDP-EQAAKRLLQEAYQRGSADNITVVIVRFLEGT 332          
BLAST of BQ623285 vs. ExPASy Swiss-Prot
Match: P2C13_ORYSJ (Probable protein phosphatase 2C 13 OS=Oryza sativa subsp. japonica GN=Os02g0255100 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.702e-17
Identity = 55/136 (40.44%), Postives = 77/136 (56.62%), Query Frame = 2
Query:    2 DHKPDRHDELTRVEAAGGRVINWNGP-RILGVLATSRSIGDQYLKPFVISKPDVMVTERSDRDEFLILASDGLWDVVSNEAACQVVRRCFSGRIKWASSVDAGNQNPXXXXXXXXXXXXISRGSSDNISVIVVELN 406
            DHKP+R DE  R+E AGG VI W G  R+ GVLA SR+ G++ LKPFV+++P++     ++  E L+LASDGLWDVV NE A  + +                 ++              SRGS+DNI+ IVV+ +
Sbjct:  240 DHKPNRSDERKRIENAGGVVI-WAGTWRVGGVLAMSRAFGNRLLKPFVVAEPEIQEELVNEDLECLVLASDGLWDVVENEEAVSLAK----------------TEDLPESVARKLTEIAYSRGSADNITCIVVQFH 358          
BLAST of BQ623285 vs. ExPASy Swiss-Prot
Match: P2C59_ORYSJ (Probable protein phosphatase 2C 59 OS=Oryza sativa subsp. japonica GN=Os06g0698300 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.223e-17
Identity = 55/133 (41.35%), Postives = 74/133 (55.64%), Query Frame = 2
Query:    2 DHKPDRHDELTRVEAAGGRVINWNGP-RILGVLATSRSIGDQYLKPFVISKPDVMVTERSDRDEFLILASDGLWDVVSNEAACQVVRRCFSGRIKWASSVDAGNQNPXXXXXXXXXXXXISRGSSDNISVIVV 397
            DHKPD+ DE  R+E AGG V+ W G  R+ GVLA SR+ GD+ LK +V++ P++         EFLILASDGLWDVV+NE A  +V+            +   +Q                RGS+DNI+ +VV
Sbjct:  193 DHKPDQSDERQRIEDAGGFVM-WAGTWRVGGVLAVSRAFGDKLLKQYVVADPEIKEEVVDSSLEFLILASDGLWDVVTNEEAVAMVKPILDSEQAAKKLLQEASQ----------------RGSADNITCLVV 308          
BLAST of BQ623285 vs. ExPASy Swiss-Prot
Match: P2C45_ORYSJ (Probable protein phosphatase 2C 45 OS=Oryza sativa subsp. japonica GN=Os04g0659500 PE=2 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 7.151e-16
Identity = 46/87 (52.87%), Postives = 58/87 (66.67%), Query Frame = 2
Query:    2 DHKPDRHDELTRVEAAGGRVINWNGP-RILGVLATSRSIGDQYLKPFVISKPDVMVTERSDRDEFLILASDGLWDVVSNEAACQVVR 259
            DHKPD+ DE  R+E AGG V+ W G  R+ GVLA SR+ GD+ LK +V+  P++         EFLILASDGLWDVV+NE A  + R
Sbjct:  155 DHKPDQTDERQRIEDAGGFVM-WAGTWRVGGVLAVSRAFGDKLLKQYVVVDPEIREEVIDHSLEFLILASDGLWDVVTNEEAVDMTR 240          
BLAST of BQ623285 vs. ExPASy Swiss-Prot
Match: P2C56_ORYSJ (Probable protein phosphatase 2C 56 OS=Oryza sativa subsp. japonica GN=Os06g0526800/Os06g0526950 PE=2 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 6.694e-14
Identity = 39/86 (45.35%), Postives = 59/86 (68.60%), Query Frame = 2
Query:    2 DHKPDRHDELTRVEAAGGRVINWNGPRILGVLATSRSIGDQYLKPFVISKPDVMVTERSDRDEFLILASDGLWDVVSNEAACQVVR 259
            DHKP+R DE  R+E AGG V+  +  R+ G+LA SR+ G++ LK +V ++PD+      +  E+LILA+DGLWDV+ NE A  +++
Sbjct:  226 DHKPNRKDEQKRIEDAGGIVVFDDTWRVNGLLAMSRAFGNRALKHYVKAEPDIQEKVVDESLEYLILATDGLWDVMRNEDAVSLLK 311          
BLAST of BQ623285 vs. ExPASy Swiss-Prot
Match: PPM1E_RAT (Protein phosphatase 1E OS=Rattus norvegicus GN=Ppm1e PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.948e-13
Identity = 51/138 (36.96%), Postives = 68/138 (49.28%), Query Frame = 2
Query:    5 HKPDRHDELTRVEAAGGRVINWNGPRILGVLATSRSIGDQYLKPFVISKPDVMVTERSDRDEFLILASDGLWDVVSNEAACQVVRRCFSGRIKWASSVDAGNQNPXXXXXXXXXXXXISRGSSDNISVIVVELNKPTK 418
            HKPDR DE  R+EA GG V+ +   R+ G L+ SR+IGD   KP++    D   T     +++LILA DG +D V+ + A +VV    S  +K        N                  GSSDNI+VIVV L    K
Sbjct:  364 HKPDREDEKQRIEALGGCVVWFGAWRVNGSLSVSRAIGDAEHKPYICGDADSASTVLDGTEDYLILACDGFYDTVNPDEAVKVV----SDHLK-------ENNGDSSMVAHKLVASARDAGSSDNITVIVVFLRDMNK 490          
BLAST of BQ623285 vs. ExPASy Swiss-Prot
Match: PPM1E_MOUSE (Protein phosphatase 1E OS=Mus musculus GN=Ppm1e PE=1 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 1.948e-13
Identity = 51/138 (36.96%), Postives = 68/138 (49.28%), Query Frame = 2
Query:    5 HKPDRHDELTRVEAAGGRVINWNGPRILGVLATSRSIGDQYLKPFVISKPDVMVTERSDRDEFLILASDGLWDVVSNEAACQVVRRCFSGRIKWASSVDAGNQNPXXXXXXXXXXXXISRGSSDNISVIVVELNKPTK 418
            HKPDR DE  R+EA GG V+ +   R+ G L+ SR+IGD   KP++    D   T     +++LILA DG +D V+ + A +VV    S  +K        N                  GSSDNI+VIVV L    K
Sbjct:  364 HKPDREDEKQRIEALGGCVVWFGAWRVNGSLSVSRAIGDAEHKPYICGDADSASTVLDGTEDYLILACDGFYDTVNPDEAVKVV----SDHLK-------ENNGDSSMVAHKLVASARDAGSSDNITVIVVFLRDMNK 490          
BLAST of BQ623285 vs. ExPASy Swiss-Prot
Match: PPM1E_HUMAN (Protein phosphatase 1E OS=Homo sapiens GN=PPM1E PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.544e-13
Identity = 50/138 (36.23%), Postives = 68/138 (49.28%), Query Frame = 2
Query:    5 HKPDRHDELTRVEAAGGRVINWNGPRILGVLATSRSIGDQYLKPFVISKPDVMVTERSDRDEFLILASDGLWDVVSNEAACQVVRRCFSGRIKWASSVDAGNQNPXXXXXXXXXXXXISRGSSDNISVIVVELNKPTK 418
            HKPDR DE  R+EA GG ++ +   R+ G L+ SR+IGD   KP++    D   T     +++LILA DG +D V+ + A +VV    S  +K        N                  GSSDNI+VIVV L    K
Sbjct:  378 HKPDREDEKQRIEALGGCIVWFGAWRVNGSLSVSRAIGDAEHKPYICGDADSASTVLDGTEDYLILACDGFYDTVNPDEAVKVV----SDHLK-------ENNGDSSMVAHKLVASARDAGSSDNITVIVVFLRDMNK 504          
BLAST of BQ623285 vs. ExPASy Swiss-Prot
Match: P2C55_ORYSJ (Probable protein phosphatase 2C 55 OS=Oryza sativa subsp. japonica GN=Os06g0526700 PE=2 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 4.339e-13
Identity = 35/86 (40.70%), Postives = 60/86 (69.77%), Query Frame = 2
Query:    2 DHKPDRHDELTRVEAAGGRVINWNGPRILGVLATSRSIGDQYLKPFVISKPDVMVTERSDRDEFLILASDGLWDVVSNEAACQVVR 259
            DHKP++ DE  R+E AGG V++ +  R+ G+LA SR+ G++ +K +V ++P++      +  E+L+LA+DGLWDV+ NE A  +++
Sbjct:  252 DHKPNKKDERKRIEDAGGIVVSDDIWRVDGILAVSRAFGNRLMKRYVKAEPNIQEKVVDEGLEYLVLATDGLWDVMRNEDAVSLLK 337          
The following BLAST results are available for this feature:
BLAST of BQ623285 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 71
Match NameE-valueIdentityDescription
P2C25_ARATH9.979e-1840.58Probable protein phosphatase 2C 25 OS=Arabidopsis ... [more]
P2C10_ORYSJ1.303e-1741.73Probable protein phosphatase 2C 10 OS=Oryza sativa... [more]
P2C13_ORYSJ1.702e-1740.44Probable protein phosphatase 2C 13 OS=Oryza sativa... [more]
P2C59_ORYSJ2.223e-1741.35Probable protein phosphatase 2C 59 OS=Oryza sativa... [more]
P2C45_ORYSJ7.151e-1652.87Probable protein phosphatase 2C 45 OS=Oryza sativa... [more]
P2C56_ORYSJ6.694e-1445.35Probable protein phosphatase 2C 56 OS=Oryza sativa... [more]
PPM1E_RAT1.948e-1336.96Protein phosphatase 1E OS=Rattus norvegicus GN=Ppm... [more]
PPM1E_MOUSE1.948e-1336.96Protein phosphatase 1E OS=Mus musculus GN=Ppm1e PE... [more]
PPM1E_HUMAN2.544e-1336.23Protein phosphatase 1E OS=Homo sapiens GN=PPM1E PE... [more]
P2C55_ORYSJ4.339e-1340.70Probable protein phosphatase 2C 55 OS=Oryza sativa... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_00376 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00376 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623285 ID=BQ623285; Name=BQ623285; organism=Citrus sinensis; type=EST; length=632bp
TGATCATAAGCCTGACAGACATGATGAACTGACAAGAGTAGAAGCTGCTG
GAGGAAGGGTCATAAACTGGAACGGCCCCCGAATCTTAGGAGTTCTTGCC
ACCTCCAGATCTATAGGCGATCAATACTTGAAACCATTTGTGATATCAAA
GCCAGATGTGATGGTGACTGAAAGAAGCGACCGCGATGAATTCCTCATAC
TTGCTAGCGATGGCTTATGGGATGTTGTATCAAATGAAGCAGCATGCCAA
GTCGTGAGGAGATGTTTCAGCGGCCGGATAAAATGGGCATCCTCCGTCGA
CGCCGGGAACCAAAACCCCGCTGCCAGAGCAGCAGCAGTGCTGGTCGAGC
TAGCCATCTCTCGGGGCAGCAGTGACAATATAAGCGTCATAGTAGTTGAG
CTAAATAAACCTACCAAGTTTAATTCCTAGTGCATCATAAAATTTAATAA
ACAGCAACAGAAGTTCGTTTTCGAAGATTTTAACCATTGTTTTGTTTAGG
TAGAAACCATGTTTTCAATTCAGAAAATGAACCGAGAGCGGCGGGAGCTC
TGTTGAATTGACGAGCTTTTCAGGGGGATTTGTTGGATGTAACATTTAAT
TCATTTGGTCAACTTTAAATTGTTCTTTTTTT
back to top