BQ623286
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of BQ623286 vs. ExPASy Swiss-Prot
Match: FAD3E_SOYBN (Omega-3 fatty acid desaturase, endoplasmic reticulum OS=Glycine max GN=FAD3 PE=2 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 9.826e-33 Identity = 83/216 (38.43%), Postives = 113/216 (52.31%), Query Frame = 2 Query: 2 YFSWKYSHRRHHSNTGSLDRDEVFVPKQKTAIGWYAKYLN-NPLGRVITLTVTLTLG-WPLYLAFNVSGRPYDRFACHFDPYGPIYSDRERLQIIISDAGILAMIYSLYCLVAAKGLVYVFCIYGGPLLVVNGFLVLITLLQHT--HPSLPHYHSSEWDWFRGALATVDRDYGILNKVFHNITDTHVAHHLFSTMPHYHAMEATKAIKPILGEYYQ 637 Y W+ SHR HH N G +++DE +VP + Y N + + R+I TV L +P+YL G+ HF+PY ++ ER I IS M L L + V +YG P + +L +T L H H LP Y EW + RG L TVDRDYG + + H+I THV HHLF +PHYH +EAT+A KP+LG+YY+ Sbjct: 129 YHGWRISHRTHHQNHGHIEKDESWVPLTEKI------YKNLDSMTRLIRFTVPFPLFVYPIYLFSRSPGKE----GSHFNPYSNLFPPSERKGIAISTLCWATMFSLLIYLSFITSPLLVLKLYGIPYWIFVMWLDFVTYLHHHGHHQKLPWYRGKEWSYLRGGLTTVDRDYGWIYNIHHDI-GTHVIHHLFPQIPHYHLVEATQAAKPVLGDYYR 333
BLAST of BQ623286 vs. ExPASy Swiss-Prot
Match: FAD3C_ARATH (Omega-3 fatty acid desaturase, chloroplastic OS=Arabidopsis thaliana GN=FAD7 PE=1 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 3.734e-32 Identity = 79/215 (36.74%), Postives = 112/215 (52.09%), Query Frame = 2 Query: 2 YFSWKYSHRRHHSNTGSLDRDEVFVPKQKTAIGWYAKYLNNPLGRVITLTVTLT-LGWPLYLAFNVSGRPYDRFACHFDPYGPIYSDRERLQIIISDAGILAMIYSLYCLVAAKGLVYVFCIYGGPLLVVNGFLVLITLLQHT--HPSLPHYHSSEWDWFRGALATVDRDYGILNKVFHNITDTHVAHHLFSTMPHYHAMEATKAIKPILGEYYQ 637 Y W+ SHR HH N G ++ DE + P + L+ P R T+ L L +P YL G+ H+ P ++ +ER ++ S A AM L CL G + + +YG P + +L +T L H LP Y EW + RG L T+DRDYG++N + H+I THV HHLF +PHYH +EAT+A KP+LG+YY+ Sbjct: 192 YHGWRISHRTHHQNHGHVENDESWHPMSEKIYNT----LDKPT-RFFRFTLPLVMLAYPFYLWARSPGKK----GSHYHPDSDLFLPKERKDVLTSTACWTAMAALLVCLNFTIGPIQMLKLYGIPYWINVMWLDFVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGLINNIHHDI-GTHVIHHLFPQIPHYHLVEATEAAKPVLGKYYR 396
BLAST of BQ623286 vs. ExPASy Swiss-Prot
Match: FAD3E_PHAAU (Omega-3 fatty acid desaturase, endoplasmic reticulum OS=Phaseolus aureus GN=ARG1 PE=2 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.086e-31 Identity = 80/217 (36.87%), Postives = 117/217 (53.92%), Query Frame = 2 Query: 2 YFSWKYSHRRHHSNTGSLDRDEVFVPKQKTAIGWYAKYLN-NPLGRVITLTVTLTL-GWPLYLAFNVSGRPYDRFACHFDPYGPIYSDRERLQIIISDAGILAMIYSLYCLVAAKGLVYVFCIYGGPLLVVNGFLVLITLLQH---THPSLPHYHSSEWDWFRGALATVDRDYGILNKVFHNITDTHVAHHLFSTMPHYHAMEATKAIKPILGEYYQ 637 Y W+ SHR HH N G +++DE +VP + Y N + + R++ + + +P YL G+ HF+PY ++S ER ++ S ++ L L G +++ +YG P L+ +L +T L H TH LP Y EW + RG L TVDRDYG +N V H+I THV HHLF +PHYH +EATK+ K +LG+YY+ Sbjct: 126 YNGWRISHRTHHQNHGHVEKDESWVPLTEKV------YKNLDDMTRMLRYSFPFPIFAYPFYLWNRSPGKE----GSHFNPYSNLFSPGERKGVVTSTLCWGIVLSVLLYLSLTIGPIFMLKLYGVPYLIFVMWLDFVTYLHHHGYTH-KLPWYRGQEWSYLRGGLTTVDRDYGWINNVHHDI-GTHVIHHLFPQIPHYHLVEATKSAKSVLGKYYR 330
BLAST of BQ623286 vs. ExPASy Swiss-Prot
Match: FAD3C_BRANA (Omega-3 fatty acid desaturase, chloroplastic (Fragment) OS=Brassica napus GN=FAD7 PE=2 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.086e-31 Identity = 79/215 (36.74%), Postives = 112/215 (52.09%), Query Frame = 2 Query: 2 YFSWKYSHRRHHSNTGSLDRDEVFVPKQKTAIGWYAKYLNNPLGRVITLTVTLT-LGWPLYLAFNVSGRPYDRFACHFDPYGPIYSDRERLQIIISDAGILAMIYSLYCLVAAKGLVYVFCIYGGPLLVVNGFLVLITLLQHT--HPSLPHYHSSEWDWFRGALATVDRDYGILNKVFHNITDTHVAHHLFSTMPHYHAMEATKAIKPILGEYYQ 637 Y W+ SHR HH N G ++ DE + P + K L+ P R T+ L L +P YL G+ H+ P ++ +ER ++ S A AM L CL G + + +Y P + +L +T L H LP Y EW + RG L T+DRDYG++N + H+I THV HHLF +PHYH +EAT+A KP+LG+YY+ Sbjct: 150 YHGWRISHRTHHQNHGHVENDESWHPMSEKIY----KSLDKPT-RFFRFTLPLVMLAYPFYLWARSPGKK----GSHYHPDSDLFLPKERNDVLTSTACWTAMAVLLVCLNFVMGPMQMLKLYVIPYWINVMWLDFVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGLINNIHHDI-GTHVIHHLFPQIPHYHLVEATEAAKPVLGKYYR 354
BLAST of BQ623286 vs. ExPASy Swiss-Prot
Match: FAD3C_RICCO (Omega-3 fatty acid desaturase, chloroplastic OS=Ricinus communis GN=FAD7A-1 PE=2 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 4.128e-31 Identity = 80/215 (37.21%), Postives = 113/215 (52.56%), Query Frame = 2 Query: 2 YFSWKYSHRRHHSNTGSLDRDEVFVPKQKTAIGWYAKYLNNPLGRVITLTVTLTLGWP-LYLAFNVSGRPYDRFACHFDPYGPIYSDRERLQIIISDAGILAMIYSLYCLVAAKGLVYVFCIYGGPLLVVNGFLVLITLLQHT--HPSLPHYHSSEWDWFRGALATVDRDYGILNKVFHNITDTHVAHHLFSTMPHYHAMEATKAIKPILGEYYQ 637 Y W+ SHR HH N G ++ DE + P + K L+N +T T+ +L +P L F + R + HF P ++ +ER II S A AM L L + G V + +YG P + +L +T L H LP Y W + RG L T+DRDYG +N + H+I THV HHLF +PHYH +EAT+A KP++G+YY+ Sbjct: 206 YHGWRISHRTHHQNHGHVENDESWHPLSEKIF----KSLDN-----VTKTLRFSLPFPMLAYPFYLWSRSPGKKGSHFHPDSGLFVPKERKDIITSTACWTAMAALLVYLNFSMGPVQMLKLYGIPYWIFVMWLDFVTYLHHHGHEDKLPWYRGKAWSYLRGGLTTLDRDYGWINNIHHDI-GTHVIHHLFPQIPHYHLVEATEAAKPVMGKYYR 410
BLAST of BQ623286 vs. ExPASy Swiss-Prot
Match: FAD3C_SOYBN (Omega-3 fatty acid desaturase, chloroplastic OS=Glycine max GN=FAD7 PE=2 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 5.392e-31 Identity = 77/215 (35.81%), Postives = 111/215 (51.63%), Query Frame = 2 Query: 2 YFSWKYSHRRHHSNTGSLDRDEVFVPKQKTAIGWYAKYLNNPLGRVITLTVTLTL-GWPLYLAFNVSGRPYDRFACHFDPYGPIYSDRERLQIIISDAGILAMIYSLYCLVAAKGLVYVFCIYGGPLLVVNGFLVLITLLQHT--HPSLPHYHSSEWDWFRGALATVDRDYGILNKVFHNITDTHVAHHLFSTMPHYHAMEATKAIKPILGEYYQ 637 Y W+ SHR HH + G + DE + P + + + R++ T L +P+YL G+ HFDP ++ ER +I S A AM+ L L G + + +YG P ++ +L L+T L H LP Y EW + RG L T+DRDYG +N + H+I THV HHLF +PHYH +EAT+A KP+ G+YY+ Sbjct: 200 YHGWRISHRTHHQHHGHAENDESWHPLPEKLFRSL-----DTVTRMLRFTAPFPLLAFPVYLFSRSPGKT----GSHFDPSSDLFVPNERKDVITSTACWAAMLGLLVGLGFVMGPIQLLKLYGVPYVIFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGWINNIHHDI-GTHVIHHLFPQIPHYHLVEATEAAKPVFGKYYR 404
BLAST of BQ623286 vs. ExPASy Swiss-Prot
Match: FAD3D_ARATH (Temperature-sensitive omega-3 fatty acid desaturase, chloroplastic OS=Arabidopsis thaliana GN=FAD8 PE=2 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.569e-30 Identity = 76/215 (35.35%), Postives = 109/215 (50.70%), Query Frame = 2 Query: 2 YFSWKYSHRRHHSNTGSLDRDEVFVPKQKTAIGWYAKYLNNPLGRVITLTVTLTLGWP-LYLAFNVSGRPYDRFACHFDPYGPIYSDRERLQIIISDAGILAMIYSLYCLVAAKGLVYVFCIYGGPLLVVNGFLVLITLLQHT--HPSLPHYHSSEWDWFRGALATVDRDYGILNKVFHNITDTHVAHHLFSTMPHYHAMEATKAIKPILGEYYQ 637 Y W+ SHR HH N G ++ DE + P ++ K T TL +P L F + R + H+ P ++ +E+ ++ S A AM L CL G + + +YG P + +L +T L H LP Y EW + RG L T+DRDYG +N + H+I THV HHLF +PHYH +EAT+A KP+LG+YY+ Sbjct: 185 YHGWRISHRTHHQNHGHVENDESWHPLPESIYKNLEK---------TTQMFRFTLPFPMLAYPFYLWNRSPGKQGSHYHPDSDLFLPKEKKDVLTSTACWTAMAALLVCLNFVMGPIQMLKLYGIPYWIFVMWLDFVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGWINNIHHDI-GTHVIHHLFPQIPHYHLVEATEAAKPVLGKYYR 389
BLAST of BQ623286 vs. ExPASy Swiss-Prot
Match: FAD3C_SESIN (Omega-3 fatty acid desaturase, chloroplastic OS=Sesamum indicum GN=FAD7 PE=2 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.049e-30 Identity = 81/215 (37.67%), Postives = 112/215 (52.09%), Query Frame = 2 Query: 2 YFSWKYSHRRHHSNTGSLDRDEVFVPKQKTAIGWYAKYLNNPLGRV-ITLTVTLTLGWPLYLAFNVSGRPYDRFACHFDPYGPIYSDRERLQIIISDAGILAMIYSLYCLVAAKGLVYVFCIYGGPLLVVNGFLVLITLLQHT--HPSLPHYHSSEWDWFRGALATVDRDYGILNKVFHNITDTHVAHHLFSTMPHYHAMEATKAIKPILGEYYQ 637 Y W+ SHR HH N G ++ DE + P + K L+ ++ TL L L +P+YL G+ HF P ++ E+ +I S AM+ L L G V + +YG P L +L L+T L H LP Y EW + RG L T+DRDYG +N + H+I THV HHLF +PHYH +EAT+A KP+LG+YY+ Sbjct: 196 YHGWRISHRTHHQNHGHVENDESWHPLSEKIY----KNLDTATKKLRFTLPFPL-LAYPIYLWSRSPGKQ----GSHFHPDSDLFVPNEKKDVITSTVCWTAMLALLVGLSFVIGPVQLLKLYGIPYLGNVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGWINNIHHDI-GTHVIHHLFPQIPHYHLIEATEAAKPVLGKYYR 400 The following BLAST results are available for this feature:
BLAST of BQ623286 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623286 ID=BQ623286; Name=BQ623286; organism=Citrus sinensis; type=EST; length=686bpback to top |