BQ623287

Overview
NameBQ623287
Unique NameBQ623287
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length557
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623287 vs. ExPASy Swiss-Prot
Match: TPIS_HORVU (Triosephosphate isomerase, cytosolic OS=Hordeum vulgare PE=1 SV=3)

HSP 1 Score: 148.288 bits (373), Expect = 2.383e-35
Identity = 74/104 (71.15%), Postives = 81/104 (77.88%), Query Frame = 1
Query:    1 KAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEVHAALRDWLKNNVSADVATKTRIIYGGSVNGSNCAELAKQEDIDGFLVGGASLKGPEFATIVNSVTSK 312
            KA A  I  W N V+AYEPVWAIGTGKVATP QAQEVHA LRDWLK NVS +VA  TRIIYGGSV G++C ELA Q D+DGFLVGGASLK PEF  I+N+   K
Sbjct:  149 KAIAGKIKDWSNGVVAYEPVWAIGTGKVATPAQAQEVHANLRDWLKTNVSPEVAESTRIIYGGSVTGASCKELAAQADVDGFLVGGASLK-PEFIDIINAAAVK 251          
BLAST of BQ623287 vs. ExPASy Swiss-Prot
Match: TPIS_PETHY (Triosephosphate isomerase, cytosolic OS=Petunia hybrida GN=TPIP1 PE=2 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 5.308e-35
Identity = 73/107 (68.22%), Postives = 82/107 (76.64%), Query Frame = 1
Query:    1 KAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEVHAALRDWLKNNVSADVATKTRIIYGGSVNGSNCAELAKQEDIDGFLVGGASLKGPEFATIVNSVTSKKVA 321
            KA AD +  W NVV+AYEPVWAIGTGKVA+P QAQEVHA LR WL  NVS +VA  TRIIYGGSVNG+NC EL  Q D+DGFLVGGASLK PEF  I+ +   K+ A
Sbjct:  149 KAIADRVKDWTNVVVAYEPVWAIGTGKVASPAQAQEVHAELRKWLAANVSPEVAASTRIIYGGSVNGANCKELGGQPDVDGFLVGGASLK-PEFIDIIKAAEVKRNA 254          
BLAST of BQ623287 vs. ExPASy Swiss-Prot
Match: TPIS_COPJA (Triosephosphate isomerase, cytosolic OS=Coptis japonica PE=2 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 2.017e-34
Identity = 72/104 (69.23%), Postives = 80/104 (76.92%), Query Frame = 1
Query:    1 KAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEVHAALRDWLKNNVSADVATKTRIIYGGSVNGSNCAELAKQEDIDGFLVGGASLKGPEFATIVNSVTSK 312
            KA A+ +  W N+V+AYEPVWAIGTGKVA+P QAQEVH  LR W+K NV ADVA   RIIYGGSVNG+N  ELA Q DIDGFLVGGASLK PEF  I+ S T K
Sbjct:  149 KAIAEKVSDWTNIVVAYEPVWAIGTGKVASPAQAQEVHFELRKWIKENVGADVAGSVRIIYGGSVNGANSKELAGQPDIDGFLVGGASLK-PEFVDIIKSATVK 251          
BLAST of BQ623287 vs. ExPASy Swiss-Prot
Match: TPIS_XENTR (Triosephosphate isomerase OS=Xenopus tropicalis GN=tpi1 PE=2 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 3.441e-34
Identity = 71/100 (71.00%), Postives = 76/100 (76.00%), Query Frame = 1
Query:    1 KAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEVHAALRDWLKNNVSADVATKTRIIYGGSVNGSNCAELAKQEDIDGFLVGGASLKGPEFATIVNS 300
            KA AD +  W  VV+AYEPVWAIGTGK ATPEQAQEVH  LR+WLK NVS DVA   RIIYGGSV G  C EL  Q DIDGFLVGGASLK PEF  I+N+
Sbjct:  148 KAIADNVKDWSKVVLAYEPVWAIGTGKTATPEQAQEVHKKLREWLKTNVSEDVAKSVRIIYGGSVTGGTCKELGAQPDIDGFLVGGASLK-PEFIDIINA 246          
BLAST of BQ623287 vs. ExPASy Swiss-Prot
Match: TPIS_NEUCR (Triosephosphate isomerase OS=Neurospora crassa GN=tpi-1 PE=3 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 3.441e-34
Identity = 71/99 (71.72%), Postives = 80/99 (80.81%), Query Frame = 1
Query:    4 AYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEVHAALRDWLKNNVSADVATKTRIIYGGSVNGSNCAELAKQEDIDGFLVGGASLKGPEFATIVNS 300
            A A  I  W NVVIAYEP+WAIGTG VAT EQAQEVHAA+R WLK NVS  VA +TRI+YGGSVN  NC +LAK++DIDGFLVGGASLK PEF  I+N+
Sbjct:  149 ALAKEINDWKNVVIAYEPIWAIGTGLVATKEQAQEVHAAIRSWLKQNVSDKVAEETRILYGGSVNAKNCKDLAKEQDIDGFLVGGASLK-PEFVDIINA 246          
BLAST of BQ623287 vs. ExPASy Swiss-Prot
Match: TPIS_CULTA (Triosephosphate isomerase OS=Culex tarsalis GN=Tpi PE=1 SV=2)

HSP 1 Score: 143.665 bits (361), Expect = 5.869e-34
Identity = 72/100 (72.00%), Postives = 78/100 (78.00%), Query Frame = 1
Query:    1 KAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEVHAALRDWLKNNVSADVATKTRIIYGGSVNGSNCAELAKQEDIDGFLVGGASLKGPEFATIVNS 300
            KA AD +  W NVVIAYEPVWAIGTGK A+PEQAQEVHAALR W   NVSADV+   RI YGGSV  +NC ELA + DIDGFLVGGASLK PEF  IVN+
Sbjct:  147 KAIADKVKDWSNVVIAYEPVWAIGTGKTASPEQAQEVHAALRKWFTENVSADVSAAIRIQYGGSVTAANCRELAAKPDIDGFLVGGASLK-PEFIQIVNA 245          
BLAST of BQ623287 vs. ExPASy Swiss-Prot
Match: TPIS_CHICK (Triosephosphate isomerase OS=Gallus gallus GN=TPI1 PE=1 SV=2)

HSP 1 Score: 143.665 bits (361), Expect = 5.869e-34
Identity = 70/100 (70.00%), Postives = 78/100 (78.00%), Query Frame = 1
Query:    1 KAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEVHAALRDWLKNNVSADVATKTRIIYGGSVNGSNCAELAKQEDIDGFLVGGASLKGPEFATIVNS 300
            KA AD +  W  VV+AYEPVWAIGTGK ATP+QAQEVH  LR WLK++VS  VA  TRIIYGGSV G NC ELA Q D+DGFLVGGASLK PEF  I+N+
Sbjct:  148 KAIADNVKDWSKVVLAYEPVWAIGTGKTATPQQAQEVHEKLRGWLKSHVSDAVAQSTRIIYGGSVTGGNCKELASQHDVDGFLVGGASLK-PEFVDIINA 246          
BLAST of BQ623287 vs. ExPASy Swiss-Prot
Match: TPIS_MACMU (Triosephosphate isomerase OS=Macaca mulatta GN=TPI1 PE=3 SV=2)

HSP 1 Score: 142.124 bits (357), Expect = 1.708e-33
Identity = 69/100 (69.00%), Postives = 77/100 (77.00%), Query Frame = 1
Query:    1 KAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEVHAALRDWLKNNVSADVATKTRIIYGGSVNGSNCAELAKQEDIDGFLVGGASLKGPEFATIVNS 300
            K  AD +  W  VV+AYEPVWAIGTGK ATP+QAQEVH  LR WLK+NVS  VA  TRIIYGGSV G+ C ELA Q D+DGFLVGGASLK PEF  I+N+
Sbjct:  149 KVIADNVKDWSKVVLAYEPVWAIGTGKTATPQQAQEVHEKLRGWLKSNVSEAVAQSTRIIYGGSVTGATCKELASQPDVDGFLVGGASLK-PEFVDIINA 247          
BLAST of BQ623287 vs. ExPASy Swiss-Prot
Match: TPIS_MACFA (Triosephosphate isomerase OS=Macaca fascicularis GN=TPI1 PE=2 SV=3)

HSP 1 Score: 142.124 bits (357), Expect = 1.708e-33
Identity = 69/100 (69.00%), Postives = 77/100 (77.00%), Query Frame = 1
Query:    1 KAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEVHAALRDWLKNNVSADVATKTRIIYGGSVNGSNCAELAKQEDIDGFLVGGASLKGPEFATIVNS 300
            K  AD +  W  VV+AYEPVWAIGTGK ATP+QAQEVH  LR WLK+NVS  VA  TRIIYGGSV G+ C ELA Q D+DGFLVGGASLK PEF  I+N+
Sbjct:  149 KVIADNVKDWSKVVLAYEPVWAIGTGKTATPQQAQEVHEKLRGWLKSNVSEAVAQSTRIIYGGSVTGATCKELASQPDVDGFLVGGASLK-PEFVDIINA 247          
BLAST of BQ623287 vs. ExPASy Swiss-Prot
Match: TPIS_XENLA (Triosephosphate isomerase OS=Xenopus laevis GN=tpi1 PE=2 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 2.230e-33
Identity = 70/100 (70.00%), Postives = 76/100 (76.00%), Query Frame = 1
Query:    1 KAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEVHAALRDWLKNNVSADVATKTRIIYGGSVNGSNCAELAKQEDIDGFLVGGASLKGPEFATIVNS 300
            KA AD +  W  VV+AYEPVWAIGTGK ATPEQAQEVH  LR+W+K NVS  VA   RIIYGGSV G  C ELA Q DIDGFLVGGASLK PEF  I+N+
Sbjct:  148 KAIADNVKDWSKVVLAYEPVWAIGTGKTATPEQAQEVHKKLREWVKTNVSEGVAQSVRIIYGGSVTGGTCRELAGQPDIDGFLVGGASLK-PEFIEIINA 246          
The following BLAST results are available for this feature:
BLAST of BQ623287 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TPIS_HORVU2.383e-3571.15Triosephosphate isomerase, cytosolic OS=Hordeum vu... [more]
TPIS_PETHY5.308e-3568.22Triosephosphate isomerase, cytosolic OS=Petunia hy... [more]
TPIS_COPJA2.017e-3469.23Triosephosphate isomerase, cytosolic OS=Coptis jap... [more]
TPIS_XENTR3.441e-3471.00Triosephosphate isomerase OS=Xenopus tropicalis GN... [more]
TPIS_NEUCR3.441e-3471.72Triosephosphate isomerase OS=Neurospora crassa GN=... [more]
TPIS_CULTA5.869e-3472.00Triosephosphate isomerase OS=Culex tarsalis GN=Tpi... [more]
TPIS_CHICK5.869e-3470.00Triosephosphate isomerase OS=Gallus gallus GN=TPI1... [more]
TPIS_MACMU1.708e-3369.00Triosephosphate isomerase OS=Macaca mulatta GN=TPI... [more]
TPIS_MACFA1.708e-3369.00Triosephosphate isomerase OS=Macaca fascicularis G... [more]
TPIS_XENLA2.230e-3370.00Triosephosphate isomerase OS=Xenopus laevis GN=tpi... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00378 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00378 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623287 ID=BQ623287; Name=BQ623287; organism=Citrus sinensis; type=EST; length=557bp
AAAGCCTATGCAGATGCTATACCCAGTTGGGATAATGTAGTCATTGCATA
TGAGCCTGTATGGGCTATTGGAACTGGTAAAGTGGCCACCCCCGAGCAGG
CTCAGGAAGTACATGCTGCTCTTCGTGATTGGCTTAAAAACAATGTCTCA
GCAGACGTTGCCACTAAAACACGTATTATCTATGGAGGGTCAGTAAATGG
AAGCAATTGTGCTGAACTTGCAAAACAAGAGGATATTGATGGTTTTCTGG
TTGGTGGCGCTTCCTTGAAGGGCCCAGAGTTTGCTACCATTGTCAATTCC
GTAACATCCAAGAAAGTAGCTGCTTGATGTATAAACCTGTTCTGTCAAGA
TCAACCAATAATAATGGGCTAAGAGAATCTATATCAGTTTAAAGCTAATT
AGTGTAACCAGCCTATGCCCTTGCTATGTTCAATGAAAGTTTTGATAGTT
TATTTATTTGTTTCTCCTTCCCCAAACAATCGGAGATTCCTTCTGTTTCT
CTATCGTGGGCTGAACTTGTTTGATACCGGACAGGAGAACAATATACAGG
TATGTTG
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