BQ623287

Overview
NameBQ623287
Unique NameBQ623287
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length557
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of BQ623287 vs. ExPASy Swiss-Prot
Match: TPIS_RABIT (Triosephosphate isomerase OS=Oryctolagus cuniculus GN=TPI1 PE=1 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 2.230e-33
Identity = 69/100 (69.00%), Postives = 77/100 (77.00%), Query Frame = 1 
Query:    1 KAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEVHAALRDWLKNNVSADVATKTRIIYGGSVNGSNCAELAKQEDIDGFLVGGASLKGPEFATIVNS 300
            K  AD +  W  VV+AYEPVWAIGTGK ATP+QAQEVH  LR WLK+NVS  VA  TRIIYGGSV G+ C ELA Q D+DGFLVGGASLK PEF  I+N+
Sbjct:  148 KVIADNVKDWSKVVLAYEPVWAIGTGKTATPQQAQEVHEKLRGWLKSNVSDAVAQSTRIIYGGSVTGATCKELASQPDVDGFLVGGASLK-PEFVDIINA 246
[Close]
BLAST of BQ623287 vs. ExPASy Swiss-Prot
Match: TPIS_PONAB (Triosephosphate isomerase OS=Pongo abelii GN=TPI1 PE=2 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 2.230e-33
Identity = 69/100 (69.00%), Postives = 77/100 (77.00%), Query Frame = 1 
Query:    1 KAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEVHAALRDWLKNNVSADVATKTRIIYGGSVNGSNCAELAKQEDIDGFLVGGASLKGPEFATIVNS 300
            K  AD +  W  VV+AYEPVWAIGTGK ATP+QAQEVH  LR WLK+NVS  VA  TRIIYGGSV G+ C ELA Q D+DGFLVGGASLK PEF  I+N+
Sbjct:  149 KVIADNVKDWSKVVLAYEPVWAIGTGKTATPQQAQEVHEKLRGWLKSNVSDAVAQSTRIIYGGSVTGATCKELASQPDVDGFLVGGASLK-PEFVDIINA 247
[Close]
BLAST of BQ623287 vs. ExPASy Swiss-Prot
Match: TPIS_PANTR (Triosephosphate isomerase OS=Pan troglodytes GN=TPI1 PE=2 SV=2)

HSP 1 Score: 141.739 bits (356), Expect = 2.230e-33
Identity = 69/100 (69.00%), Postives = 77/100 (77.00%), Query Frame = 1 
Query:    1 KAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEVHAALRDWLKNNVSADVATKTRIIYGGSVNGSNCAELAKQEDIDGFLVGGASLKGPEFATIVNS 300
            K  AD +  W  VV+AYEPVWAIGTGK ATP+QAQEVH  LR WLK+NVS  VA  TRIIYGGSV G+ C ELA Q D+DGFLVGGASLK PEF  I+N+
Sbjct:  149 KVIADNVKDWSKVVLAYEPVWAIGTGKTATPQQAQEVHEKLRGWLKSNVSDAVAQSTRIIYGGSVTGATCKELASQPDVDGFLVGGASLK-PEFVDIINA 247
[Close]
BLAST of BQ623287 vs. ExPASy Swiss-Prot
Match: TPIS_HUMAN (Triosephosphate isomerase OS=Homo sapiens GN=TPI1 PE=1 SV=2)

HSP 1 Score: 141.739 bits (356), Expect = 2.230e-33
Identity = 69/100 (69.00%), Postives = 77/100 (77.00%), Query Frame = 1 
Query:    1 KAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEVHAALRDWLKNNVSADVATKTRIIYGGSVNGSNCAELAKQEDIDGFLVGGASLKGPEFATIVNS 300
            K  AD +  W  VV+AYEPVWAIGTGK ATP+QAQEVH  LR WLK+NVS  VA  TRIIYGGSV G+ C ELA Q D+DGFLVGGASLK PEF  I+N+
Sbjct:  149 KVIADNVKDWSKVVLAYEPVWAIGTGKTATPQQAQEVHEKLRGWLKSNVSDAVAQSTRIIYGGSVTGATCKELASQPDVDGFLVGGASLK-PEFVDIINA 247
[Close]
BLAST of BQ623287 vs. ExPASy Swiss-Prot
Match: TPIS_CANFA (Triosephosphate isomerase OS=Canis familiaris GN=TPI1 PE=1 SV=3)

HSP 1 Score: 141.739 bits (356), Expect = 2.230e-33
Identity = 69/100 (69.00%), Postives = 77/100 (77.00%), Query Frame = 1 
Query:    1 KAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEVHAALRDWLKNNVSADVATKTRIIYGGSVNGSNCAELAKQEDIDGFLVGGASLKGPEFATIVNS 300
            K  AD +  W  VV+AYEPVWAIGTGK ATP+QAQEVH  LR WLK+NVS  VA  TRIIYGGSV G+ C ELA Q D+DGFLVGGASLK PEF  I+N+
Sbjct:  149 KVIADNVKDWSKVVLAYEPVWAIGTGKTATPQQAQEVHEKLRGWLKSNVSDAVAQSTRIIYGGSVTGATCKELASQPDVDGFLVGGASLK-PEFVDIINA 247
[Close]
BLAST of BQ623287 vs. ExPASy Swiss-Prot
Match: TPIS_MOUSE (Triosephosphate isomerase OS=Mus musculus GN=Tpi1 PE=1 SV=3)

HSP 1 Score: 140.969 bits (354), Expect = 3.804e-33
Identity = 68/100 (68.00%), Postives = 77/100 (77.00%), Query Frame = 1 
Query:    1 KAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEVHAALRDWLKNNVSADVATKTRIIYGGSVNGSNCAELAKQEDIDGFLVGGASLKGPEFATIVNS 300
            K  AD +  W  VV+AYEPVWAIGTGK ATP+QAQEVH  LR WLK+NV+  VA  TRIIYGGSV G+ C ELA Q D+DGFLVGGASLK PEF  I+N+
Sbjct:  149 KVIADNVKDWSKVVLAYEPVWAIGTGKTATPQQAQEVHEKLRGWLKSNVNDGVAQSTRIIYGGSVTGATCKELASQPDVDGFLVGGASLK-PEFVDIINA 247
[Close]
BLAST of BQ623287 vs. ExPASy Swiss-Prot
Match: TPIS_RAT (Triosephosphate isomerase OS=Rattus norvegicus GN=Tpi1 PE=1 SV=2)

HSP 1 Score: 140.198 bits (352), Expect = 6.489e-33
Identity = 70/100 (70.00%), Postives = 77/100 (77.00%), Query Frame = 1 
Query:    1 KAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEVHAALRDWLKNNVSADVATKTRIIYGGSVNGSNCAELAKQEDIDGFLVGGASLKGPEFATIVNS 300
            KA AD +  W  VV+AYEPVWAIGTGK ATP+QAQEVH  LR WLK NVS  VA  TRIIYGGSV G+ C ELA Q D+DGFLVGGASLK PEF  I+N+
Sbjct:  149 KAIADNVKDWCKVVLAYEPVWAIGTGKTATPQQAQEVHEKLRGWLKCNVSEGVAQCTRIIYGGSVTGATCKELASQPDVDGFLVGGASLK-PEFVDIINA 247
[Close]
BLAST of BQ623287 vs. ExPASy Swiss-Prot
Match: TPIS_GORGO (Triosephosphate isomerase OS=Gorilla gorilla gorilla GN=TPI1 PE=3 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 6.489e-33
Identity = 68/100 (68.00%), Postives = 76/100 (76.00%), Query Frame = 1 
Query:    1 KAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEVHAALRDWLKNNVSADVATKTRIIYGGSVNGSNCAELAKQEDIDGFLVGGASLKGPEFATIVNS 300
            K   D +  W  VV+AYEPVWAIGTGK ATP+QAQEVH  LR WLK+NVS  VA  TRIIYGGSV G+ C ELA Q D+DGFLVGGASLK PEF  I+N+
Sbjct:  149 KVITDNVKDWSKVVLAYEPVWAIGTGKTATPQQAQEVHEKLRGWLKSNVSDAVAQSTRIIYGGSVTGATCKELASQPDVDGFLVGGASLK-PEFVDIINA 247
[Close]
BLAST of BQ623287 vs. ExPASy Swiss-Prot
Match: TPIS_GRAVE (Triosephosphate isomerase, cytosolic (Fragment) OS=Gracilaria verrucosa GN=TPI1 PE=3 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 8.475e-33
Identity = 69/100 (69.00%), Postives = 81/100 (81.00%), Query Frame = 1 
Query:    1 KAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEVHAALRDWLKNNVSADVATKTRIIYGGSVNGSNCAELAKQEDIDGFLVGGASLKGPEFATIVNS 300
            +A +DAI  W +VVIAYEPVWAIGTGKVATPEQA++VH A+R WL NNVS  VA  TRI+YGGSV+ +NC  LAKQ +IDGFLVGGAS+K P F  IV+S
Sbjct:  143 QALSDAISDWSDVVIAYEPVWAIGTGKVATPEQAEQVHEAVRAWLANNVSPQVAASTRILYGGSVSPANCESLAKQPNIDGFLVGGASMK-PTFLEIVDS 241
[Close]
BLAST of BQ623287 vs. ExPASy Swiss-Prot
Match: TPIS_BOVIN (Triosephosphate isomerase OS=Bos taurus GN=TPI1 PE=2 SV=3)

HSP 1 Score: 139.813 bits (351), Expect = 8.475e-33
Identity = 68/100 (68.00%), Postives = 76/100 (76.00%), Query Frame = 1 
Query:    1 KAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEVHAALRDWLKNNVSADVATKTRIIYGGSVNGSNCAELAKQEDIDGFLVGGASLKGPEFATIVNS 300
            K  AD +  W  VV+AYEPVWAIGTGK ATP+QAQEVH  LR WLK+NVS  VA   RIIYGGSV G+ C ELA Q D+DGFLVGGASLK PEF  I+N+
Sbjct:  149 KVIADNVKDWSKVVLAYEPVWAIGTGKTATPQQAQEVHEKLRGWLKSNVSDAVAQSARIIYGGSVTGATCKELASQPDVDGFLVGGASLK-PEFVDIINA 247
The following BLAST results are available for this feature:
BLAST of BQ623287 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TPIS_RABIT2.230e-3369.00Triosephosphate isomerase OS=Oryctolagus cuniculus... [more]
TPIS_PONAB2.230e-3369.00Triosephosphate isomerase OS=Pongo abelii GN=TPI1 ... [more]
TPIS_PANTR2.230e-3369.00Triosephosphate isomerase OS=Pan troglodytes GN=TP... [more]
TPIS_HUMAN2.230e-3369.00Triosephosphate isomerase OS=Homo sapiens GN=TPI1 ... [more]
TPIS_CANFA2.230e-3369.00Triosephosphate isomerase OS=Canis familiaris GN=T... [more]
TPIS_MOUSE3.804e-3368.00Triosephosphate isomerase OS=Mus musculus GN=Tpi1 ... [more]
TPIS_RAT6.489e-3370.00Triosephosphate isomerase OS=Rattus norvegicus GN=... [more]
TPIS_GORGO6.489e-3368.00Triosephosphate isomerase OS=Gorilla gorilla goril... [more]
TPIS_GRAVE8.475e-3369.00Triosephosphate isomerase, cytosolic (Fragment) OS... [more]
TPIS_BOVIN8.475e-3368.00Triosephosphate isomerase OS=Bos taurus GN=TPI1 PE... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00378 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00378 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623287 ID=BQ623287; Name=BQ623287; organism=Citrus sinensis; type=EST; length=557bp
AAAGCCTATGCAGATGCTATACCCAGTTGGGATAATGTAGTCATTGCATA
TGAGCCTGTATGGGCTATTGGAACTGGTAAAGTGGCCACCCCCGAGCAGG
CTCAGGAAGTACATGCTGCTCTTCGTGATTGGCTTAAAAACAATGTCTCA
GCAGACGTTGCCACTAAAACACGTATTATCTATGGAGGGTCAGTAAATGG
AAGCAATTGTGCTGAACTTGCAAAACAAGAGGATATTGATGGTTTTCTGG
TTGGTGGCGCTTCCTTGAAGGGCCCAGAGTTTGCTACCATTGTCAATTCC
GTAACATCCAAGAAAGTAGCTGCTTGATGTATAAACCTGTTCTGTCAAGA
TCAACCAATAATAATGGGCTAAGAGAATCTATATCAGTTTAAAGCTAATT
AGTGTAACCAGCCTATGCCCTTGCTATGTTCAATGAAAGTTTTGATAGTT
TATTTATTTGTTTCTCCTTCCCCAAACAATCGGAGATTCCTTCTGTTTCT
CTATCGTGGGCTGAACTTGTTTGATACCGGACAGGAGAACAATATACAGG
TATGTTG
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