BQ623287

Overview
NameBQ623287
Unique NameBQ623287
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length557
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623287 vs. ExPASy Swiss-Prot
Match: TPIS_BACHD (Triosephosphate isomerase OS=Bacillus halodurans GN=tpiA PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.229e-15
Identity = 44/88 (50.00%), Postives = 55/88 (62.50%), Query Frame = 1
Query:   40 VIAYEPVWAIGTGKVATPEQAQEVHAALRDWLKNNVSADVATKTRIIYGGSVNGSNCAELAKQEDIDGFLVGGASLKGPEFATIVNSV 303
            VIAYEPVWAIGTGK ++ E A +V + +R  +    S + A   RI YGGSV  +N AE   Q DIDG LVGGASL    F  ++ +V
Sbjct:  163 VIAYEPVWAIGTGKSSSAEDANDVCSYIRKVVTEKFSQEAADAVRIQYGGSVKPANIAEYMAQSDIDGALVGGASLDPQSFLQLLEAV 250          
BLAST of BQ623287 vs. ExPASy Swiss-Prot
Match: TPIS1_BRUME (Triosephosphate isomerase 1 OS=Brucella melitensis GN=tpiA1 PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.229e-15
Identity = 43/87 (49.43%), Postives = 54/87 (62.07%), Query Frame = 1
Query:   31 DNVVIAYEPVWAIGTGKVATPEQAQEVHAALRDWLKNNVSADVATKTRIIYGGSVNGSNCAELAKQEDIDGFLVGGASLKGPEFATI 291
            +N +IAYEP+WAIGTG   T +  +  HA +R+ L     A  A   R++YGGSV  SN AEL    D+DG LVGGASLK  +F  I
Sbjct:  162 ENTIIAYEPIWAIGTGLTPTVQDVRAAHAFMREQLIERFGAKGA-HLRLLYGGSVKPSNAAELLGVADVDGALVGGASLKAADFLAI 247          
BLAST of BQ623287 vs. ExPASy Swiss-Prot
Match: TPIS_STRPZ (Triosephosphate isomerase OS=Streptococcus pyogenes serotype M49 (strain NZ131) GN=tpiA PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.606e-15
Identity = 40/88 (45.45%), Postives = 57/88 (64.77%), Query Frame = 1
Query:   34 NVVIAYEPVWAIGTGKVATPEQAQEVHAALRDWLKNNVSADVATKTRIIYGGSVNGSNCAELAKQEDIDGFLVGGASLKGPEFATIVN 297
            ++V+AYEP+WAIGTGK AT + AQ +  A+RD +  +   +VA K R+ YGGSV   N  +     D+DG LVGGASL+   F  +++
Sbjct:  162 SLVLAYEPIWAIGTGKSATQDDAQNMCKAVRDVVAADFGQEVADKVRVQYGGSVKPENVKDYMACPDVDGALVGGASLEADSFLALLD 249          
BLAST of BQ623287 vs. ExPASy Swiss-Prot
Match: TPIS_STRPM (Triosephosphate isomerase OS=Streptococcus pyogenes serotype M28 GN=tpiA PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.606e-15
Identity = 40/88 (45.45%), Postives = 57/88 (64.77%), Query Frame = 1
Query:   34 NVVIAYEPVWAIGTGKVATPEQAQEVHAALRDWLKNNVSADVATKTRIIYGGSVNGSNCAELAKQEDIDGFLVGGASLKGPEFATIVN 297
            ++V+AYEP+WAIGTGK AT + AQ +  A+RD +  +   +VA K R+ YGGSV   N  +     D+DG LVGGASL+   F  +++
Sbjct:  162 SLVLAYEPIWAIGTGKSATQDDAQNMCKAVRDVVAADFGQEVADKVRVQYGGSVKPENVKDYMACPDVDGALVGGASLEADSFLALLD 249          
BLAST of BQ623287 vs. ExPASy Swiss-Prot
Match: TPIS_STRPF (Triosephosphate isomerase OS=Streptococcus pyogenes serotype M4 (strain MGAS10750) GN=tpiA PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.606e-15
Identity = 40/88 (45.45%), Postives = 57/88 (64.77%), Query Frame = 1
Query:   34 NVVIAYEPVWAIGTGKVATPEQAQEVHAALRDWLKNNVSADVATKTRIIYGGSVNGSNCAELAKQEDIDGFLVGGASLKGPEFATIVN 297
            ++V+AYEP+WAIGTGK AT + AQ +  A+RD +  +   +VA K R+ YGGSV   N  +     D+DG LVGGASL+   F  +++
Sbjct:  162 SLVLAYEPIWAIGTGKSATQDDAQNMCKAVRDVVAADFGQEVADKVRVQYGGSVKPENVKDYMACPDVDGALVGGASLEADSFLALLD 249          
BLAST of BQ623287 vs. ExPASy Swiss-Prot
Match: TPIS_STRPD (Triosephosphate isomerase OS=Streptococcus pyogenes serotype M2 (strain MGAS10270) GN=tpiA PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.606e-15
Identity = 40/88 (45.45%), Postives = 57/88 (64.77%), Query Frame = 1
Query:   34 NVVIAYEPVWAIGTGKVATPEQAQEVHAALRDWLKNNVSADVATKTRIIYGGSVNGSNCAELAKQEDIDGFLVGGASLKGPEFATIVN 297
            ++V+AYEP+WAIGTGK AT + AQ +  A+RD +  +   +VA K R+ YGGSV   N  +     D+DG LVGGASL+   F  +++
Sbjct:  162 SLVLAYEPIWAIGTGKSATQDDAQNMCKAVRDVVAADFGQEVADKVRVQYGGSVKPENVKDYMACPDVDGALVGGASLEADSFLALLD 249          
BLAST of BQ623287 vs. ExPASy Swiss-Prot
Match: TPIS_STRPC (Triosephosphate isomerase OS=Streptococcus pyogenes serotype M12 (strain MGAS9429) GN=tpiA PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.606e-15
Identity = 40/88 (45.45%), Postives = 57/88 (64.77%), Query Frame = 1
Query:   34 NVVIAYEPVWAIGTGKVATPEQAQEVHAALRDWLKNNVSADVATKTRIIYGGSVNGSNCAELAKQEDIDGFLVGGASLKGPEFATIVN 297
            ++V+AYEP+WAIGTGK AT + AQ +  A+RD +  +   +VA K R+ YGGSV   N  +     D+DG LVGGASL+   F  +++
Sbjct:  162 SLVLAYEPIWAIGTGKSATQDDAQNMCKAVRDVVAADFGQEVADKVRVQYGGSVKPENVKDYMACPDVDGALVGGASLEADSFLALLD 249          
BLAST of BQ623287 vs. ExPASy Swiss-Prot
Match: TPIS_STRPB (Triosephosphate isomerase OS=Streptococcus pyogenes serotype M12 (strain MGAS2096) GN=tpiA PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.606e-15
Identity = 40/88 (45.45%), Postives = 57/88 (64.77%), Query Frame = 1
Query:   34 NVVIAYEPVWAIGTGKVATPEQAQEVHAALRDWLKNNVSADVATKTRIIYGGSVNGSNCAELAKQEDIDGFLVGGASLKGPEFATIVN 297
            ++V+AYEP+WAIGTGK AT + AQ +  A+RD +  +   +VA K R+ YGGSV   N  +     D+DG LVGGASL+   F  +++
Sbjct:  162 SLVLAYEPIWAIGTGKSATQDDAQNMCKAVRDVVAADFGQEVADKVRVQYGGSVKPENVKDYMACPDVDGALVGGASLEADSFLALLD 249          
BLAST of BQ623287 vs. ExPASy Swiss-Prot
Match: TPIS_STRP8 (Triosephosphate isomerase OS=Streptococcus pyogenes serotype M18 GN=tpiA PE=3 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 1.606e-15
Identity = 40/88 (45.45%), Postives = 57/88 (64.77%), Query Frame = 1
Query:   34 NVVIAYEPVWAIGTGKVATPEQAQEVHAALRDWLKNNVSADVATKTRIIYGGSVNGSNCAELAKQEDIDGFLVGGASLKGPEFATIVN 297
            ++V+AYEP+WAIGTGK AT + AQ +  A+RD +  +   +VA K R+ YGGSV   N  +     D+DG LVGGASL+   F  +++
Sbjct:  162 SLVLAYEPIWAIGTGKSATQDDAQNMCKAVRDVVAADFGQEVADKVRVQYGGSVKPENVKDYMACPDVDGALVGGASLEADSFLALLD 249          
BLAST of BQ623287 vs. ExPASy Swiss-Prot
Match: TPIS_STRP3 (Triosephosphate isomerase OS=Streptococcus pyogenes serotype M3 GN=tpiA PE=3 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 1.606e-15
Identity = 40/88 (45.45%), Postives = 57/88 (64.77%), Query Frame = 1
Query:   34 NVVIAYEPVWAIGTGKVATPEQAQEVHAALRDWLKNNVSADVATKTRIIYGGSVNGSNCAELAKQEDIDGFLVGGASLKGPEFATIVN 297
            ++V+AYEP+WAIGTGK AT + AQ +  A+RD +  +   +VA K R+ YGGSV   N  +     D+DG LVGGASL+   F  +++
Sbjct:  162 SLVLAYEPIWAIGTGKSATQDDAQNMCKAVRDVVAADFGQEVADKVRVQYGGSVKPENVKDYMACPDVDGALVGGASLEADSFLALLD 249          
The following BLAST results are available for this feature:
BLAST of BQ623287 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TPIS_BACHD1.229e-1550.00Triosephosphate isomerase OS=Bacillus halodurans G... [more]
TPIS1_BRUME1.229e-1549.43Triosephosphate isomerase 1 OS=Brucella melitensis... [more]
TPIS_STRPZ1.606e-1545.45Triosephosphate isomerase OS=Streptococcus pyogene... [more]
TPIS_STRPM1.606e-1545.45Triosephosphate isomerase OS=Streptococcus pyogene... [more]
TPIS_STRPF1.606e-1545.45Triosephosphate isomerase OS=Streptococcus pyogene... [more]
TPIS_STRPD1.606e-1545.45Triosephosphate isomerase OS=Streptococcus pyogene... [more]
TPIS_STRPC1.606e-1545.45Triosephosphate isomerase OS=Streptococcus pyogene... [more]
TPIS_STRPB1.606e-1545.45Triosephosphate isomerase OS=Streptococcus pyogene... [more]
TPIS_STRP81.606e-1545.45Triosephosphate isomerase OS=Streptococcus pyogene... [more]
TPIS_STRP31.606e-1545.45Triosephosphate isomerase OS=Streptococcus pyogene... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00378 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00378 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623287 ID=BQ623287; Name=BQ623287; organism=Citrus sinensis; type=EST; length=557bp
AAAGCCTATGCAGATGCTATACCCAGTTGGGATAATGTAGTCATTGCATA
TGAGCCTGTATGGGCTATTGGAACTGGTAAAGTGGCCACCCCCGAGCAGG
CTCAGGAAGTACATGCTGCTCTTCGTGATTGGCTTAAAAACAATGTCTCA
GCAGACGTTGCCACTAAAACACGTATTATCTATGGAGGGTCAGTAAATGG
AAGCAATTGTGCTGAACTTGCAAAACAAGAGGATATTGATGGTTTTCTGG
TTGGTGGCGCTTCCTTGAAGGGCCCAGAGTTTGCTACCATTGTCAATTCC
GTAACATCCAAGAAAGTAGCTGCTTGATGTATAAACCTGTTCTGTCAAGA
TCAACCAATAATAATGGGCTAAGAGAATCTATATCAGTTTAAAGCTAATT
AGTGTAACCAGCCTATGCCCTTGCTATGTTCAATGAAAGTTTTGATAGTT
TATTTATTTGTTTCTCCTTCCCCAAACAATCGGAGATTCCTTCTGTTTCT
CTATCGTGGGCTGAACTTGTTTGATACCGGACAGGAGAACAATATACAGG
TATGTTG
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