BQ623287

Overview
NameBQ623287
Unique NameBQ623287
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length557
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12296 contig Csv1_Contig12296:240..796. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623287 vs. ExPASy Swiss-Prot
Match: TPIS_PLAFA (Triosephosphate isomerase OS=Plasmodium falciparum GN=TPI PE=1 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 4.504e-26
Identity = 58/100 (58.00%), Postives = 72/100 (72.00%), Query Frame = 1
Query:    1 KAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEVHAALRDWLKNNVSADVATKTRIIYGGSVNGSNCAELAKQEDIDGFLVGGASLKGPEFATIVNS 300
            KA+ D I ++DNV++AYEP+WAIGTGK ATPEQAQ VH  +R  +K+      A + RI+YGGSVN  NC+ L +QEDIDGFLVG ASLK   F  I+ S
Sbjct:  148 KAFVDLIDNFDNVILAYEPLWAIGTGKTATPEQAQLVHKEIRKIVKDTCGEKQANQIRILYGGSVNTENCSSLIQQEDIDGFLVGNASLK-ESFVDIIKS 246          
BLAST of BQ623287 vs. ExPASy Swiss-Prot
Match: TPIS_PLAF7 (Triosephosphate isomerase OS=Plasmodium falciparum (isolate 3D7) GN=TPI PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 4.504e-26
Identity = 58/100 (58.00%), Postives = 72/100 (72.00%), Query Frame = 1
Query:    1 KAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEVHAALRDWLKNNVSADVATKTRIIYGGSVNGSNCAELAKQEDIDGFLVGGASLKGPEFATIVNS 300
            KA+ D I ++DNV++AYEP+WAIGTGK ATPEQAQ VH  +R  +K+      A + RI+YGGSVN  NC+ L +QEDIDGFLVG ASLK   F  I+ S
Sbjct:  148 KAFVDLIDNFDNVILAYEPLWAIGTGKTATPEQAQLVHKEIRKIVKDTCGEKQANQIRILYGGSVNTENCSSLIQQEDIDGFLVGNASLK-ESFVDIIKS 246          
BLAST of BQ623287 vs. ExPASy Swiss-Prot
Match: TPIS_KLULA (Triosephosphate isomerase OS=Kluyveromyces lactis GN=TPI1 PE=3 SV=2)

HSP 1 Score: 117.472 bits (293), Expect = 4.504e-26
Identity = 55/100 (55.00%), Postives = 70/100 (70.00%), Query Frame = 1
Query:    1 KAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEVHAALRDWLKNNVSADVATKTRIIYGGSVNGSNCAELAKQEDIDGFLVGGASLKGPEFATIVNS 300
            +A  + +  W NVV+AYEPVWAIGTG  AT E AQ++H ++R++L   +S DVA   RI+YGGS NG N      + D+DGFLVGGASLK PEF  I+NS
Sbjct:  148 QAVLEKVQDWTNVVVAYEPVWAIGTGLAATAEDAQDIHHSIREFLAEKLSRDVADSVRILYGGSANGKNAVTFKDKADVDGFLVGGASLK-PEFVDIINS 246          
BLAST of BQ623287 vs. ExPASy Swiss-Prot
Match: TPIS_CANGA (Triosephosphate isomerase OS=Candida glabrata GN=TPI1 PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 5.883e-26
Identity = 55/94 (58.51%), Postives = 67/94 (71.28%), Query Frame = 1
Query:   19 IPSWDNVVIAYEPVWAIGTGKVATPEQAQEVHAALRDWLKNNVSADVATKTRIIYGGSVNGSNCAELAKQEDIDGFLVGGASLKGPEFATIVNS 300
            +  W NVVIAYEPVWAIGTG  AT E AQ++H ++R +L   +  D A KTRI+YGGS NG+N      + D+DGFLVGGASLK PEF  I+NS
Sbjct:  154 VKDWTNVVIAYEPVWAIGTGLAATAEDAQDIHHSIRSYLAEKLGKDTAEKTRILYGGSANGANAGTFKDKADVDGFLVGGASLK-PEFVDIINS 246          
BLAST of BQ623287 vs. ExPASy Swiss-Prot
Match: TPIS_KLUMA (Triosephosphate isomerase OS=Kluyveromyces marxianus GN=TPI1 PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 7.683e-26
Identity = 55/100 (55.00%), Postives = 69/100 (69.00%), Query Frame = 1
Query:    1 KAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEVHAALRDWLKNNVSADVATKTRIIYGGSVNGSNCAELAKQEDIDGFLVGGASLKGPEFATIVNS 300
            +A  D +  W NVV+AYEPVWAIGTG  AT + AQ +H ++R++L   +S D A K RI+YGGS NG N      + D+DGFLVGGASLK PEF  I+NS
Sbjct:  148 QAVLDKVQDWTNVVVAYEPVWAIGTGLAATSDDAQAIHHSIREFLAKKLSKDTAEKIRILYGGSANGKNAVTFKDKADVDGFLVGGASLK-PEFVDIINS 246          
BLAST of BQ623287 vs. ExPASy Swiss-Prot
Match: TPIS_CULPI (Triosephosphate isomerase (Fragment) OS=Culex pipiens GN=Tpi PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 1.712e-25
Identity = 55/78 (70.51%), Postives = 60/78 (76.92%), Query Frame = 1
Query:    1 KAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEVHAALRDWLKNNVSADVATKTRIIYGGSVNGSNCAELAKQED 234
            KA AD +  W NVVIAYEPVWAIGTGK ATPEQAQEVHAALR W   NVSADV++  RI YGGSV  +NC ELA + D
Sbjct:  129 KAIADKVKDWSNVVIAYEPVWAIGTGKTATPEQAQEVHAALRKWFTENVSADVSSAIRIQYGGSVTAANCRELAAKPD 206          
BLAST of BQ623287 vs. ExPASy Swiss-Prot
Match: TPIS_CANAL (Triosephosphate isomerase OS=Candida albicans GN=TPI1 PE=1 SV=3)

HSP 1 Score: 115.546 bits (288), Expect = 1.712e-25
Identity = 54/99 (54.55%), Postives = 69/99 (69.70%), Query Frame = 1
Query:    4 AYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEVHAALRDWLKNNVSADVATKTRIIYGGSVNGSNCAELAKQEDIDGFLVGGASLKGPEFATIVNS 300
            A +  +  W N+V+AYEPVWAIGTG  ATPE A+E H  +R  L  ++ A+ A KTRI+YGGSVNG N  +   + ++DGFLVGGASLK PEF  I+ S
Sbjct:  149 AVSKIVSDWSNIVVAYEPVWAIGTGLAATPEDAEETHKGIRAHLAKSIGAEQAEKTRILYGGSVNGKNAKDFKDKANVDGFLVGGASLK-PEFVDIIKS 246          
BLAST of BQ623287 vs. ExPASy Swiss-Prot
Match: TPIS_YARLI (Triosephosphate isomerase OS=Yarrowia lipolytica GN=TPI1 PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 2.919e-25
Identity = 58/94 (61.70%), Postives = 67/94 (71.28%), Query Frame = 1
Query:   19 IPSWDNVVIAYEPVWAIGTGKVATPEQAQEVHAALRDWLKNNVSADVATKTRIIYGGSVNGSNCAELAKQEDIDGFLVGGASLKGPEFATIVNS 300
            I  W NVVIAYEPVWAIGTG  AT E AQ++H  +R +LK+ + A  A K RIIYGGSVNG N      + D+DGFLVGGASLK PEF  I+NS
Sbjct:  154 IKDWSNVVIAYEPVWAIGTGLAATAEDAQQIHHEIRAYLKDKIGAQ-ADKVRIIYGGSVNGKNSGTFKDKSDVDGFLVGGASLK-PEFVDIINS 245          
BLAST of BQ623287 vs. ExPASy Swiss-Prot
Match: TPIS_AEDTO (Triosephosphate isomerase (Fragment) OS=Aedes togoi GN=Tpi PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 4.980e-25
Identity = 53/78 (67.95%), Postives = 59/78 (75.64%), Query Frame = 1
Query:    1 KAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEVHAALRDWLKNNVSADVATKTRIIYGGSVNGSNCAELAKQED 234
            KA AD +  W NVV+AYEPVWAIGTGK ATPEQAQEVH ALR W  +NVSADV+   RI YGGSV  +NC ELA + D
Sbjct:  129 KAIADKVKDWSNVVVAYEPVWAIGTGKTATPEQAQEVHVALRKWFTDNVSADVSASIRIQYGGSVTAANCRELAAKPD 206          
BLAST of BQ623287 vs. ExPASy Swiss-Prot
Match: TPIS_ANOME (Triosephosphate isomerase (Fragment) OS=Anopheles merus GN=Tpi PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 2.471e-24
Identity = 54/78 (69.23%), Postives = 58/78 (74.36%), Query Frame = 1
Query:    1 KAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEVHAALRDWLKNNVSADVATKTRIIYGGSVNGSNCAELAKQED 234
            KA A  +  W NVVIAYEPVWAIGTGK ATPEQAQEVHAALR W   NVSADV+   RI YGGSV  +NC ELA + D
Sbjct:  129 KAIAAQVKDWSNVVIAYEPVWAIGTGKTATPEQAQEVHAALRKWFTENVSADVSNAIRIQYGGSVTAANCRELAGKPD 206          
The following BLAST results are available for this feature:
BLAST of BQ623287 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TPIS_PLAFA4.504e-2658.00Triosephosphate isomerase OS=Plasmodium falciparum... [more]
TPIS_PLAF74.504e-2658.00Triosephosphate isomerase OS=Plasmodium falciparum... [more]
TPIS_KLULA4.504e-2655.00Triosephosphate isomerase OS=Kluyveromyces lactis ... [more]
TPIS_CANGA5.883e-2658.51Triosephosphate isomerase OS=Candida glabrata GN=T... [more]
TPIS_KLUMA7.683e-2655.00Triosephosphate isomerase OS=Kluyveromyces marxian... [more]
TPIS_CULPI1.712e-2570.51Triosephosphate isomerase (Fragment) OS=Culex pipi... [more]
TPIS_CANAL1.712e-2554.55Triosephosphate isomerase OS=Candida albicans GN=T... [more]
TPIS_YARLI2.919e-2561.70Triosephosphate isomerase OS=Yarrowia lipolytica G... [more]
TPIS_AEDTO4.980e-2567.95Triosephosphate isomerase (Fragment) OS=Aedes togo... [more]
TPIS_ANOME2.471e-2469.23Triosephosphate isomerase (Fragment) OS=Anopheles ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00378 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00378 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623287 ID=BQ623287; Name=BQ623287; organism=Citrus sinensis; type=EST; length=557bp
AAAGCCTATGCAGATGCTATACCCAGTTGGGATAATGTAGTCATTGCATA
TGAGCCTGTATGGGCTATTGGAACTGGTAAAGTGGCCACCCCCGAGCAGG
CTCAGGAAGTACATGCTGCTCTTCGTGATTGGCTTAAAAACAATGTCTCA
GCAGACGTTGCCACTAAAACACGTATTATCTATGGAGGGTCAGTAAATGG
AAGCAATTGTGCTGAACTTGCAAAACAAGAGGATATTGATGGTTTTCTGG
TTGGTGGCGCTTCCTTGAAGGGCCCAGAGTTTGCTACCATTGTCAATTCC
GTAACATCCAAGAAAGTAGCTGCTTGATGTATAAACCTGTTCTGTCAAGA
TCAACCAATAATAATGGGCTAAGAGAATCTATATCAGTTTAAAGCTAATT
AGTGTAACCAGCCTATGCCCTTGCTATGTTCAATGAAAGTTTTGATAGTT
TATTTATTTGTTTCTCCTTCCCCAAACAATCGGAGATTCCTTCTGTTTCT
CTATCGTGGGCTGAACTTGTTTGATACCGGACAGGAGAACAATATACAGG
TATGTTG
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