BQ623292
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of BQ623292 vs. ExPASy Swiss-Prot
Match: RS11_THESM (30S ribosomal protein S11P OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=rps11p PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 8.523e-32 Identity = 66/114 (57.89%), Postives = 87/114 (76.32%), Query Frame = 3 Query: 141 FGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDSTR 482 +GVAHI+AS+N+T IH+TDL+G ET+ + +GGM VKADRDESSPYAAM+AA+ ++ E GI +HIK+RA AQ+A+RALAR+G++IGR+EDVTPIP D TR Sbjct: 16 WGVAHIYASYNNTIIHITDLTGAETISKWSGGMVVKADRDESSPYAAMIAARRAAEEAMEKGINGVHIKVRAPGGSKSKNPGPGAQAAIRALARAGLRIGRVEDVTPIPHDGTR 129 HSP 2 Score: 20.4014 bits (41), Expect = 8.523e-32 Identity = 7/9 (77.78%), Postives = 9/9 (100.00%), Query Frame = 1 Query: 487 RGGRRGRKV 513 +GGRRGR+V Sbjct: 131 KGGRRGRRV 139
BLAST of BQ623292 vs. ExPASy Swiss-Prot
Match: RS11_METKA (30S ribosomal protein S11P OS=Methanopyrus kandleri GN=rps11p PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 1.756e-31 Identity = 68/115 (59.13%), Postives = 86/115 (74.78%), Query Frame = 3 Query: 141 FGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDSTRR 485 +G+AHI+ASFN+T I +TDL+G ET R +GGM V ADR+ESSPYAAM AA+ ++ E GITA+H+K+RA AQ+A+RALAR+G+KIGRIEDVTPIP D TRR Sbjct: 14 WGIAHIYASFNNTIITITDLTGAETFARWSGGMVVDADREESSPYAAMKAARRAAEEAMEKGITAVHVKVRAPGGHGPKTPGPGAQAAIRALARAGLKIGRIEDVTPIPHDGTRR 128
BLAST of BQ623292 vs. ExPASy Swiss-Prot
Match: RS11_PYRKO (30S ribosomal protein S11P OS=Pyrococcus kodakaraensis GN=rps11p PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 1.883e-31 Identity = 65/114 (57.02%), Postives = 87/114 (76.32%), Query Frame = 3 Query: 141 FGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDSTR 482 +GVAHI++S+N+T IH+TDL+G ET+ R +GGM VKADRDE SPYAAM+AA+ ++ E GIT +HIK+RA AQ+A+RAL+R+G++IGR+EDVTPIP D TR Sbjct: 17 WGVAHIYSSYNNTIIHITDLTGAETISRWSGGMVVKADRDEPSPYAAMIAARRAAEEAMEKGITGVHIKVRAPGGSKSKSPGPGAQAAIRALSRAGLRIGRVEDVTPIPHDGTR 130 HSP 2 Score: 20.4014 bits (41), Expect = 1.883e-31 Identity = 7/9 (77.78%), Postives = 9/9 (100.00%), Query Frame = 1 Query: 487 RGGRRGRKV 513 +GGRRGR+V Sbjct: 132 KGGRRGRRV 140
BLAST of BQ623292 vs. ExPASy Swiss-Prot
Match: RS11_PYRFU (30S ribosomal protein S11P OS=Pyrococcus furiosus GN=rps11p PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 2.454e-31 Identity = 65/114 (57.02%), Postives = 86/114 (75.44%), Query Frame = 3 Query: 141 FGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDSTR 482 +G+AHI++SFN+T IH+TD++G ET+ R +GGM VKADRDE SPYAAMLAA+ ++ E GI +HI++RA AQ+A+RALAR+G+KIGR+EDVTPIP D TR Sbjct: 14 WGIAHIYSSFNNTIIHITDITGAETISRWSGGMVVKADRDEPSPYAAMLAARRAAEEALEKGIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRVEDVTPIPHDGTR 127 HSP 2 Score: 20.4014 bits (41), Expect = 2.454e-31 Identity = 7/9 (77.78%), Postives = 9/9 (100.00%), Query Frame = 1 Query: 487 RGGRRGRKV 513 +GGRRGR+V Sbjct: 129 KGGRRGRRV 137
BLAST of BQ623292 vs. ExPASy Swiss-Prot
Match: RS11_HYPBU (30S ribosomal protein S11P OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) GN=rps11p PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 2.996e-31 Identity = 67/115 (58.26%), Postives = 87/115 (75.65%), Query Frame = 3 Query: 141 FGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDSTRR 485 +GVAHI++S+N+T IH+TDL+G ET+ R +GGM VKADR++ SPYAAMLAA +Q+ + GI ALHIK+RA AQ+A+RALAR+G IGRIEDVTP+P D+TRR Sbjct: 10 WGVAHIYSSYNNTIIHITDLTGAETVARTSGGMVVKADREKPSPYAAMLAASRAAQQAMDRGIMALHIKVRAPGGHGPKTPGPGAQAAIRALARAGFIIGRIEDVTPLPHDTTRR 124
BLAST of BQ623292 vs. ExPASy Swiss-Prot
Match: RS11_METMJ (30S ribosomal protein S11P OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=rps11p PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 3.205e-31 Identity = 68/117 (58.12%), Postives = 86/117 (73.50%), Query Frame = 3 Query: 132 EHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDSTR 482 E +G+AHIFASFN+T I VTDLSG ET+ + +GGM VK DR+ESSPYAAM A V+Q ++ GIT +H+K+RA AQ+A+RALAR+GM+IGRIEDVTP+P DS R Sbjct: 3 EEKWGIAHIFASFNNTIITVTDLSGAETVTKSSGGMVVKQDRNESSPYAAMQMAIQVAQNARDKGITGVHVKVRAPGRGKQRSPGPGAQAAIRALARAGMRIGRIEDVTPVPHDSIR 119 HSP 2 Score: 20.4014 bits (41), Expect = 3.205e-31 Identity = 7/9 (77.78%), Postives = 9/9 (100.00%), Query Frame = 1 Query: 487 RGGRRGRKV 513 +GGRRGR+V Sbjct: 121 KGGRRGRRV 129
BLAST of BQ623292 vs. ExPASy Swiss-Prot
Match: RS11_IGNH4 (30S ribosomal protein S11P OS=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) GN=rps11p PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 3.913e-31 Identity = 67/115 (58.26%), Postives = 86/115 (74.78%), Query Frame = 3 Query: 141 FGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDSTRR 485 +GVAHIF+S N+TF+H+TD++G ET R+TGGM VKAD ++ SPYAAM+AA +Q+ E GITA+HIK+RA AQ+A+RALARSG IGRIEDVTP+P D+ RR Sbjct: 7 WGVAHIFSSPNNTFVHITDITGSETASRVTGGMVVKADHEKPSPYAAMIAAARAAQQAMERGITAIHIKVRAPGGYGPKTPGPGAQAAIRALARSGFIIGRIEDVTPLPHDTIRR 121
BLAST of BQ623292 vs. ExPASy Swiss-Prot
Match: RS11_PYRHO (30S ribosomal protein S11P OS=Pyrococcus horikoshii GN=rps11p PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 5.421e-31 Identity = 64/114 (56.14%), Postives = 86/114 (75.44%), Query Frame = 3 Query: 141 FGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDSTR 482 +G+AHI++S+N+T IH+TD++G ET+ R +GGM VKADRDE SPYAAMLAA+ ++ E GI +HI++RA AQ+A+RALAR+G+KIGR+EDVTPIP D TR Sbjct: 14 WGIAHIYSSYNNTIIHITDITGAETISRWSGGMVVKADRDEPSPYAAMLAARRAAEEALEKGIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRVEDVTPIPHDGTR 127 HSP 2 Score: 20.4014 bits (41), Expect = 5.421e-31 Identity = 7/9 (77.78%), Postives = 9/9 (100.00%), Query Frame = 1 Query: 487 RGGRRGRKV 513 +GGRRGR+V Sbjct: 129 KGGRRGRRV 137
BLAST of BQ623292 vs. ExPASy Swiss-Prot
Match: RS11_PYRAB (30S ribosomal protein S11P OS=Pyrococcus abyssi GN=rps11p PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 5.421e-31 Identity = 64/114 (56.14%), Postives = 86/114 (75.44%), Query Frame = 3 Query: 141 FGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDSTR 482 +G+AHI++S+N+T IH+TD++G ET+ R +GGM VKADRDE SPYAAMLAA+ ++ E GI +HI++RA AQ+A+RALAR+G+KIGR+EDVTPIP D TR Sbjct: 14 WGIAHIYSSYNNTIIHITDITGAETISRWSGGMVVKADRDEPSPYAAMLAARRAAEEALEKGIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRVEDVTPIPHDGTR 127 HSP 2 Score: 20.4014 bits (41), Expect = 5.421e-31 Identity = 7/9 (77.78%), Postives = 9/9 (100.00%), Query Frame = 1 Query: 487 RGGRRGRKV 513 +GGRRGR+V Sbjct: 129 KGGRRGRRV 137
BLAST of BQ623292 vs. ExPASy Swiss-Prot
Match: RS11_THEON (30S ribosomal protein S11P OS=Thermococcus onnurineus (strain NA1) GN=rps11p PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.196e-30 Identity = 64/114 (56.14%), Postives = 85/114 (74.56%), Query Frame = 3 Query: 141 FGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDSTR 482 +GVAHI++S+N+T IH+TDL+G ET+ R +GGM VKADRDE SPYAAM+AA+ ++ E G +HIK+RA AQ+A+RALAR+G++IGR+EDVTPIP D TR Sbjct: 16 WGVAHIYSSYNNTIIHITDLTGAETVSRWSGGMVVKADRDEPSPYAAMIAAKRAAEEAMEKGFVGVHIKVRAPGGSKSKTPGPGAQAAIRALARAGLRIGRVEDVTPIPHDGTR 129 HSP 2 Score: 20.4014 bits (41), Expect = 1.196e-30 Identity = 7/9 (77.78%), Postives = 9/9 (100.00%), Query Frame = 1 Query: 487 RGGRRGRKV 513 +GGRRGR+V Sbjct: 131 KGGRRGRRV 139 The following BLAST results are available for this feature:
BLAST of BQ623292 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 302
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >BQ623292 ID=BQ623292; Name=BQ623292; organism=Citrus sinensis; type=EST; length=670bpback to top |