BQ623292
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of BQ623292 vs. ExPASy Swiss-Prot
Match: RS11_METHJ (30S ribosomal protein S11P OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=rps11p PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.200e-30 Identity = 67/119 (56.30%), Postives = 87/119 (73.11%), Query Frame = 3 Query: 126 DGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDSTR 482 +G+ +GVAHI+ASFN+T I VTDL+G ET+ + +GGM VK DR+ESSPYAAM A +V+Q +E GI LH+K+RA AQ+A+RALAR+GM+IG IEDVTP+P DS R Sbjct: 3 EGKEKWGVAHIYASFNNTIITVTDLTGAETITKSSGGMVVKQDRNESSPYAAMQMAGNVAQAAREKGIVGLHVKVRAPGRGKQRSPGPGAQAAIRALARAGMRIGLIEDVTPVPHDSIR 121 HSP 2 Score: 20.4014 bits (41), Expect = 1.200e-30 Identity = 7/9 (77.78%), Postives = 9/9 (100.00%), Query Frame = 1 Query: 487 RGGRRGRKV 513 +GGRRGR+V Sbjct: 123 KGGRRGRRV 131
BLAST of BQ623292 vs. ExPASy Swiss-Prot
Match: RS11_THEGJ (30S ribosomal protein S11P OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=rps11p PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.028e-30 Identity = 63/114 (55.26%), Postives = 85/114 (74.56%), Query Frame = 3 Query: 141 FGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDSTR 482 +GVAHI++S+N+T IH+TD++G ET+ R +GGM VKADRDE SPYAAM+AA+ ++ E G +HIK+RA AQ+A+RALAR+G++IGR+EDVTPIP D TR Sbjct: 15 WGVAHIYSSYNNTIIHITDITGAETVSRWSGGMVVKADRDEPSPYAAMIAARRAAEEAMEKGFVGVHIKVRAPGGSKSKSPGPGAQAAIRALARAGLRIGRVEDVTPIPHDGTR 128 HSP 2 Score: 20.4014 bits (41), Expect = 2.028e-30 Identity = 7/9 (77.78%), Postives = 9/9 (100.00%), Query Frame = 1 Query: 487 RGGRRGRKV 513 +GGRRGR+V Sbjct: 130 KGGRRGRRV 138
BLAST of BQ623292 vs. ExPASy Swiss-Prot
Match: RS11_STAMF (30S ribosomal protein S11P OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=rps11p PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.536e-30 Identity = 67/115 (58.26%), Postives = 85/115 (73.91%), Query Frame = 3 Query: 141 FGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDSTRR 485 +GVAHI++S N+T IH+TDL+G ET+ R +GGM VKADR++ SPYAAM+AA + + GITALHIK+RA AQ+A+RALAR+G IGRIEDVTPIP D+TRR Sbjct: 10 WGVAHIYSSLNNTIIHITDLTGAETVSRWSGGMVVKADREKPSPYAAMIAASRAAAEAMDKGITALHIKVRAPGGHGPKTPGPGAQAAIRALARAGFIIGRIEDVTPIPHDTTRR 124
BLAST of BQ623292 vs. ExPASy Swiss-Prot
Match: RS11_METB6 (30S ribosomal protein S11P OS=Methanoregula boonei (strain 6A8) GN=rps11p PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 5.845e-30 Identity = 66/114 (57.89%), Postives = 84/114 (73.68%), Query Frame = 3 Query: 141 FGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDSTR 482 +G+AHIFASFN+T I VTDLSG ET+ + +GGM VK DR+ESSPYAAM A +V+ +E GI +H+K+RA AQ+A+RALAR+GM+IGRIEDVTP+P DS R Sbjct: 9 WGIAHIFASFNNTIITVTDLSGAETVTKSSGGMVVKQDRNESSPYAAMQMAANVAAIAREKGIVGVHVKVRAPGQGKQRSPGPGAQAAIRALARAGMRIGRIEDVTPVPHDSCR 122 HSP 2 Score: 20.4014 bits (41), Expect = 5.845e-30 Identity = 7/9 (77.78%), Postives = 9/9 (100.00%), Query Frame = 1 Query: 487 RGGRRGRKV 513 +GGRRGR+V Sbjct: 124 KGGRRGRRV 132
BLAST of BQ623292 vs. ExPASy Swiss-Prot
Match: RS11_METLZ (30S ribosomal protein S11P OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=rps11p PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 7.623e-30 Identity = 66/114 (57.89%), Postives = 85/114 (74.56%), Query Frame = 3 Query: 141 FGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDSTR 482 +G+AHIFASFN+T I VTDLSG ET+ + +GGM VK R+ESSPYAAM A +++Q K+ GIT LHI++RA AQ+A+RAL+R+GM+IGRIEDVTP+P DS R Sbjct: 8 WGIAHIFASFNNTIITVTDLSGAETICKSSGGMVVKQARNESSPYAAMQMAINIAQASKDKGITGLHIRVRAPGNGRQRSPGPGAQAAIRALSRAGMRIGRIEDVTPVPHDSIR 121 HSP 2 Score: 20.4014 bits (41), Expect = 7.623e-30 Identity = 7/9 (77.78%), Postives = 9/9 (100.00%), Query Frame = 1 Query: 487 RGGRRGRKV 513 +GGRRGR+V Sbjct: 123 KGGRRGRRV 131
BLAST of BQ623292 vs. ExPASy Swiss-Prot
Match: RS14_ENCCU (40S ribosomal protein S14 OS=Encephalitozoon cuniculi GN=RPS14 PE=1 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 6.247e-29 Identity = 61/113 (53.98%), Postives = 80/113 (70.80%), Query Frame = 3 Query: 147 VAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDSTRR 485 VAHI A+ NDTF+H+TD++G ET+ +ITGGM+VKA RDE SPYAAMLAAQDV+ + G+ LH KLR AQ+A+R L R+G+++GRIEDVTP+ D R+ Sbjct: 13 VAHIKATKNDTFVHITDMTGSETIAKITGGMRVKAQRDEGSPYAAMLAAQDVATKILGRGVKVLHFKLRGAGGVKPMALGPGAQTAIRTLIRAGLRVGRIEDVTPVARDRVRK 125
BLAST of BQ623292 vs. ExPASy Swiss-Prot
Match: RS11_METTP (30S ribosomal protein S11P OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=rps11p PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 8.159e-29 Identity = 62/117 (52.99%), Postives = 84/117 (71.79%), Query Frame = 3 Query: 132 EHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDSTR 482 E + +AHI++SFN+T I +TDL+G ET+ +I+GGM VKA RDESSPY AM A V+++ K GI +H+K+RA AQ+A+RALAR+G++IGRIEDVTPIP D T+ Sbjct: 3 EGKWAIAHIYSSFNNTLITITDLTGAETIAKISGGMVVKAARDESSPYTAMQMAMQVAEQAKAKGIVGVHVKVRAPGGNKQRSPGPGAQAAIRALARAGLRIGRIEDVTPIPHDGTK 119
BLAST of BQ623292 vs. ExPASy Swiss-Prot
Match: RS11_UNCMA (30S ribosomal protein S11P OS=Uncultured methanogenic archaeon RC-I GN=rps11p PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.066e-28 Identity = 63/114 (55.26%), Postives = 84/114 (73.68%), Query Frame = 3 Query: 141 FGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDSTR 482 + +AHIF+SFN+T I VTDL+G ETL + +GGM VK DR+ESSPYAAM A +V+++ K GI +HI++RA AQ+A+R+LAR+G++IGRIEDVTPIP D TR Sbjct: 9 WAIAHIFSSFNNTIITVTDLTGAETLAKTSGGMVVKQDRNESSPYAAMQMAMNVAEQIKAKGIQGVHIRVRAPGGNHQRSPGPGAQAAIRSLARAGLRIGRIEDVTPIPHDGTR 122
BLAST of BQ623292 vs. ExPASy Swiss-Prot
Match: RS11_ARCFU (30S ribosomal protein S11P OS=Archaeoglobus fulgidus GN=rps11p PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.392e-28 Identity = 62/114 (54.39%), Postives = 82/114 (71.93%), Query Frame = 3 Query: 141 FGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDSTR 482 +G+AHI++S+N+T I +TD++G E + R++GGM VKADRDE +PY AM AA + KE GI +HIK+RA AQ+A+RALAR+G+KIGRIEDVTPIP D TR Sbjct: 10 WGIAHIYSSYNNTIITITDITGAEIIARVSGGMIVKADRDEGNPYTAMQAALRAAAIAKEKGIDGVHIKVRAPGGNKHTTPGPGAQAAIRALARAGLKIGRIEDVTPIPHDGTR 123
BLAST of BQ623292 vs. ExPASy Swiss-Prot
Match: RS11_META3 (30S ribosomal protein S11P OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=rps11p PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.100e-28 Identity = 62/113 (54.87%), Postives = 81/113 (71.68%), Query Frame = 3 Query: 141 FGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDST 479 +GV HI+AS+N+T IHVTD++G ET+ +I+GGM VK +DESSPYAAM A ++ +E GI +HIK+RA AQ+A+RALAR+G+KIGRIED TPIP D T Sbjct: 5 WGVIHIYASYNNTIIHVTDITGAETIAKISGGMIVKNQKDESSPYAAMQGAFKIADMIREKGIDKVHIKVRATGGSKSKNPGPGAQAAIRALARAGIKIGRIEDATPIPHDGT 117 The following BLAST results are available for this feature:
BLAST of BQ623292 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 302
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623292 ID=BQ623292; Name=BQ623292; organism=Citrus sinensis; type=EST; length=670bpback to top |