BQ623292
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of BQ623292 vs. ExPASy Swiss-Prot
Match: RS11_METJA (30S ribosomal protein S11P OS=Methanocaldococcus jannaschii GN=rps11p PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 7.637e-27 Identity = 57/113 (50.44%), Postives = 80/113 (70.80%), Query Frame = 3 Query: 141 FGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDST 479 +G+ HI++S+N+T IH TD++G ET+ R++GG + RDE SPYAAM AA +++ KE GI +HIK+RA AQ+A+RALAR+G++IGRIEDVTP+P D T Sbjct: 9 WGIVHIYSSYNNTIIHATDITGAETIARVSGGRVTRNQRDEGSPYAAMQAAFKLAEVLKERGIENIHIKVRAPGGSGQKNPGPGAQAAIRALARAGLRIGRIEDVTPVPHDGT 121
BLAST of BQ623292 vs. ExPASy Swiss-Prot
Match: RS11_THEVO (30S ribosomal protein S11P OS=Thermoplasma volcanium GN=rps11p PE=3 SV=2) HSP 1 Score: 120.168 bits (300), Expect = 9.974e-27 Identity = 63/114 (55.26%), Postives = 82/114 (71.93%), Query Frame = 3 Query: 144 GVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDSTRR 485 G+AHI+AS N+T IHVTD +G ET+ ++GGM VK DRD++SPYAAM AA VS+ KE IT L IK+RA AQ+A+RAL+R+G+KI RIE+VTPIP D T++ Sbjct: 10 GIAHIYASQNNTIIHVTDPTGAETIAMVSGGMVVKNDRDQASPYAAMKAADMVSETLKEHEITDLIIKVRAPGGNKSKIPGPGAQAAIRALSRAGLKIVRIEEVTPIPHDGTKK 123
BLAST of BQ623292 vs. ExPASy Swiss-Prot
Match: RS11_METBU (30S ribosomal protein S11P OS=Methanococcoides burtonii (strain DSM 6242) GN=rps11p PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.303e-26 Identity = 60/115 (52.17%), Postives = 80/115 (69.57%), Query Frame = 3 Query: 138 VFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDSTR 482 ++GVAHI SFN+T I VTDL+G ET+ + +GGM VKA RDESSPY AM A ++ ++ G+ +HIK+RA AQ+A+RA AR+G++IGRIEDVTP+P D TR Sbjct: 5 IWGVAHIKCSFNNTIITVTDLTGAETIAKSSGGMVVKAARDESSPYTAMQMATQLADILRDKGLEGVHIKVRAPGGNKQRSPGPGAQAAIRAFARAGVRIGRIEDVTPVPHDGTR 119
BLAST of BQ623292 vs. ExPASy Swiss-Prot
Match: RS11_NATPD (30S ribosomal protein S11P OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=rps11p PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.222e-26 Identity = 57/114 (50.00%), Postives = 83/114 (72.81%), Query Frame = 3 Query: 141 FGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDSTR 482 +G+A+++ASFN+T I VTD++G ET+V+ +GG VK +RDE+SPYAAM A+ V++ K+ GI +H+++R AQ+ +RALAR+G++IGRIEDVTPIP D TR Sbjct: 7 WGIANVYASFNNTIITVTDMTGAETIVKSSGGTVVKQNRDEASPYAAMQMAEVVAEDVKDAGIDGVHVRVRGPGGNQQQNPGPGAQATIRALARAGLEIGRIEDVTPIPHDGTR 120
BLAST of BQ623292 vs. ExPASy Swiss-Prot
Match: RS11_SULTO (30S ribosomal protein S11P OS=Sulfolobus tokodaii GN=rps11p PE=3 SV=2) HSP 1 Score: 118.627 bits (296), Expect = 2.902e-26 Identity = 61/115 (53.04%), Postives = 80/115 (69.57%), Query Frame = 3 Query: 141 FGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDSTRR 485 +G+A ++AS N+T I +TD++G E + R +GGM VKADR++ SPYAAMLAA + + GI+A+HIK+RA AQ A+RALAR+G IGRIEDVTPIP DS RR Sbjct: 9 WGIARVYASQNNTLITITDITGAEIISRASGGMVVKADREKPSPYAAMLAANKAATEAFDKGISAIHIKVRAQGGYGSKTPGPGAQPAIRALARAGFIIGRIEDVTPIPHDSIRR 123
BLAST of BQ623292 vs. ExPASy Swiss-Prot
Match: RS11_METAC (30S ribosomal protein S11P OS=Methanosarcina acetivorans GN=rps11p PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 2.902e-26 Identity = 59/114 (51.75%), Postives = 80/114 (70.18%), Query Frame = 3 Query: 141 FGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDSTR 482 + VAHI +SFN+T I VTD++G ET+ + +GGM VKA RDESSPY AM A ++ + K+ GI +HI++RA AQ+A+RA AR+G++IGRIEDVTP+P D TR Sbjct: 6 WAVAHIKSSFNNTIITVTDITGAETIAKSSGGMVVKAARDESSPYTAMQMAGQLADQLKDKGINGIHIRVRAPGGNKQRSPGPGAQAAIRAFARAGIRIGRIEDVTPVPHDGTR 119
BLAST of BQ623292 vs. ExPASy Swiss-Prot
Match: RS11_CALMQ (30S ribosomal protein S11P OS=Caldivirga maquilingensis (strain DSMZ 13496 / IC-167) GN=rps11p PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 3.790e-26 Identity = 60/114 (52.63%), Postives = 80/114 (70.18%), Query Frame = 3 Query: 141 FGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDSTR 482 +G+A+I+AS N+T I +TDL+G ET+ R++GG VKADRD+ SPYAAM+AA +Q GI A+H+K+R A +A+RALAR+GM IGRIEDVTPIP D+ R Sbjct: 9 WGIAYIYASSNNTMIIITDLTGSETVARVSGGQVVKADRDKPSPYAAMMAAYKAAQIAMARGINAVHVKVRGPGGYGLKVPGPGAVAAIRALARAGMIIGRIEDVTPIPHDTIR 122
BLAST of BQ623292 vs. ExPASy Swiss-Prot
Match: RS11_METMA (30S ribosomal protein S11P OS=Methanosarcina mazei GN=rps11p PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 6.465e-26 Identity = 58/114 (50.88%), Postives = 80/114 (70.18%), Query Frame = 3 Query: 141 FGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDSTR 482 + VAHI +SFN+T I VTD++G ET+ + +GGM VKA RDESSPY AM A ++ + ++ GI +HI++RA AQ+A+RA AR+G++IGRIEDVTP+P D TR Sbjct: 6 WAVAHIKSSFNNTIITVTDITGAETIAKSSGGMVVKAARDESSPYTAMQMAGQLADQLRDKGINGIHIRVRAPGGNKQRSPGPGAQAAIRAFARAGIRIGRIEDVTPVPHDGTR 119
BLAST of BQ623292 vs. ExPASy Swiss-Prot
Match: RS11_METBF (30S ribosomal protein S11P OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=rps11p PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.103e-25 Identity = 58/114 (50.88%), Postives = 80/114 (70.18%), Query Frame = 3 Query: 141 FGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDSTR 482 + VAHI +SFN+T I VTD++G ET+ + +GGM VKA RDESSPY AM A ++ + ++ GI +HI++RA AQ+A+RA AR+G++IGRIEDVTP+P D TR Sbjct: 6 WAVAHIKSSFNNTIITVTDITGAETIAKSSGGMVVKAARDESSPYTAMQMAGQLADQLRDKGIHGIHIRVRAPGGNKQRSPGPGAQAAIRAFARAGIRIGRIEDVTPVPHDGTR 119
BLAST of BQ623292 vs. ExPASy Swiss-Prot
Match: RS11_PICTO (30S ribosomal protein S11P OS=Picrophilus torridus GN=rps11p PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 1.327e-25 Identity = 62/114 (54.39%), Postives = 81/114 (71.05%), Query Frame = 3 Query: 144 GVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDSTRR 485 G+AHI+AS N+T I VTD +G ET+ + +GGM VK DRDE+SPYAAM AA VS++ +E IT L I++RA AQSA+RAL+R+G KI RIE+VTPIP D T++ Sbjct: 5 GIAHIYASQNNTIILVTDPTGAETIAKSSGGMVVKNDRDEASPYAAMRAADMVSEKLREREITDLIIRVRAPGGSKSKIPGPGAQSAIRALSRAGFKILRIEEVTPIPHDGTKK 118 HSP 2 Score: 20.7866 bits (42), Expect = 1.327e-25 Identity = 7/10 (70.00%), Postives = 10/10 (100.00%), Query Frame = 1 Query: 484 ERGGRRGRKV 513 ++GGRRGR+V Sbjct: 118 KKGGRRGRRV 127 The following BLAST results are available for this feature:
BLAST of BQ623292 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 302
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >BQ623292 ID=BQ623292; Name=BQ623292; organism=Citrus sinensis; type=EST; length=670bpback to top |