BQ623292
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of BQ623292 vs. ExPASy Swiss-Prot
Match: RS11_PYRAE (30S ribosomal protein S11P OS=Pyrobaculum aerophilum GN=rps11p PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 7.903e-24 Identity = 57/114 (50.00%), Postives = 77/114 (67.54%), Query Frame = 3 Query: 141 FGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDSTR 482 +G+A I++S N+T I +TDL+G ET+ R++GG V+AD+D+ SP+AAM AA +Q GI A+HIK+R A +A+RALARSG+ IGRIEDVTPIP D R Sbjct: 10 WGIAWIYSSSNNTIITITDLTGAETVARVSGGQVVRADKDKPSPWAAMQAAYKAAQLALARGINAVHIKVRGPGGYGMKVPGPGASAAIRALARSGLVIGRIEDVTPIPHDIIR 123
BLAST of BQ623292 vs. ExPASy Swiss-Prot
Match: RS11_NANEQ (30S ribosomal protein S11P OS=Nanoarchaeum equitans GN=rps11p PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.761e-23 Identity = 60/116 (51.72%), Postives = 77/116 (66.38%), Query Frame = 3 Query: 141 FGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRA-XXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDSTRR 485 +GVAHI++S N+T IH+TD++G ET+ +GGM V ADR E SP AA+LAA+ + KE GIT LHIK+RA A +A++ LAR G+KIG IEDVTP P D RR Sbjct: 6 WGVAHIYSSENNTIIHITDITGAETIAVGSGGMVVNADRLEGSPTAAILAAKRAAALAKERGITGLHIKVRAPGGHNGPWIPGPGASAAIKTLAREGLKIGIIEDVTPTPHDGCRR 121
BLAST of BQ623292 vs. ExPASy Swiss-Prot
Match: RS14_PIG (40S ribosomal protein S14 (Fragment) OS=Sus scrofa GN=RPS14 PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.003e-23 Identity = 55/78 (70.51%), Postives = 64/78 (82.05%), Query Frame = 3 Query: 72 RKTREPKEENV-TLGPAVRDGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDV 302 RK +E KEE V +LGP V +GE+VFGV HIFAS NDTF+HVTDLSG E++ R+TGGMK+KADR E SPY AMLAAQ V Sbjct: 2 RKGKEKKEEQVISLGPQVAEGENVFGVCHIFASPNDTFVHVTDLSGXESICRVTGGMKMKADRXEXSPYXAMLAAQAV 79
BLAST of BQ623292 vs. ExPASy Swiss-Prot
Match: RS14_TOBAC (40S ribosomal protein S14 (Fragment) OS=Nicotiana tabacum GN=RPS14 PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.548e-14 Identity = 43/57 (75.44%), Postives = 43/57 (75.44%), Query Frame = 3 Query: 315 KELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDSTRR 485 KELGI ALHIKLRA AQSALRALARSGMKIGRIEDVTPIPTDST R Sbjct: 1 KELGINALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPIPTDSTPR 57
BLAST of BQ623292 vs. ExPASy Swiss-Prot
Match: RS11_CAUSK (30S ribosomal protein S11 OS=Caulobacter sp. (strain K31) GN=rpsK PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.679e-13 Identity = 45/113 (39.82%), Postives = 60/113 (53.10%), Query Frame = 3 Query: 144 GVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDSTR 482 GVAH+ ASFN+T I +TD G G M K R +S+PYAA +AA+D ++ E G+ L + + +SALRAL +GM I I DVTPIP + R Sbjct: 19 GVAHVNASFNNTMITITDAQGNTISWSSAGAMGFKGSR-KSTPYAAQMAAEDAGKKAAEHGVKTLEVNVSG--------PGSGRESALRALQAAGMTITTIRDVTPIPHNGCR 122
BLAST of BQ623292 vs. ExPASy Swiss-Prot
Match: RS11_PELCD (30S ribosomal protein S11 OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=rpsK PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 4.806e-13 Identity = 40/113 (35.40%), Postives = 68/113 (60.18%), Query Frame = 3 Query: 144 GVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDSTR 482 G+AHI A+FN+T + +TD++G G M K R +S+P+AA +AA+D +++ E G+ ++ ++++ +SALRAL+ +G+ I I+DVTPIP + R Sbjct: 21 GIAHIQATFNNTIVTITDIAGNVISWSTCGTMNFKGSR-KSTPFAAQIAAEDAAKKAMEHGLRSVEVRVKGPGSGR--------ESALRALSSAGLNISVIKDVTPIPHNGCR 124
BLAST of BQ623292 vs. ExPASy Swiss-Prot
Match: RS11_CAUCR (30S ribosomal protein S11 OS=Caulobacter crescentus GN=rpsK PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 8.197e-13 Identity = 45/113 (39.82%), Postives = 60/113 (53.10%), Query Frame = 3 Query: 144 GVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDSTR 482 GVAH+ ASFN+T I +TD G G M K R +S+PYAA +AA+D ++ E G+ L + + +SALRAL +GM I I DVTPIP + R Sbjct: 19 GVAHVNASFNNTMITITDAQGNTISWSSAGMMGFKGSR-KSTPYAAQMAAEDAGKKAAEHGVKTLEVNVSG--------PGSGRESALRALQAAGMTITTIRDVTPIPHNGCR 122
BLAST of BQ623292 vs. ExPASy Swiss-Prot
Match: RS11_CAUCN (30S ribosomal protein S11 OS=Caulobacter crescentus (strain NA1000 / CB15N) GN=rpsK PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 8.197e-13 Identity = 45/113 (39.82%), Postives = 60/113 (53.10%), Query Frame = 3 Query: 144 GVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDSTR 482 GVAH+ ASFN+T I +TD G G M K R +S+PYAA +AA+D ++ E G+ L + + +SALRAL +GM I I DVTPIP + R Sbjct: 19 GVAHVNASFNNTMITITDAQGNTISWSSAGMMGFKGSR-KSTPYAAQMAAEDAGKKAAEHGVKTLEVNVSG--------PGSGRESALRALQAAGMTITTIRDVTPIPHNGCR 122
BLAST of BQ623292 vs. ExPASy Swiss-Prot
Match: RS11_AZOC5 (30S ribosomal protein S11 OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=rpsK PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.398e-12 Identity = 44/113 (38.94%), Postives = 61/113 (53.98%), Query Frame = 3 Query: 144 GVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDSTR 482 GVAH+ ASFN+T I +TD G G M K R +S+PYAA LAA+D +++ E G+ L +++ +SALRAL +G + I DVTPIP + R Sbjct: 19 GVAHVNASFNNTMITITDAQGNTISWSSAGAMGFKGSR-KSTPYAAQLAAEDAARKAAEHGMRTLEVEVSG--------PGSGRESALRALQAAGFLVTSIRDVTPIPHNGCR 122
BLAST of BQ623292 vs. ExPASy Swiss-Prot
Match: RS11_SPHWW (30S ribosomal protein S11 OS=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) GN=rpsK PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.826e-12 Identity = 44/113 (38.94%), Postives = 60/113 (53.10%), Query Frame = 3 Query: 144 GVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDSTR 482 GVAH+ ASFN+T I +TD G G M K R +S+PYAA +AA+D ++ E G+ L ++++ +SALRAL G I I DVTPIP + R Sbjct: 19 GVAHVNASFNNTMITITDAQGNAIAWSSAGMMGFKGSR-KSTPYAAQVAAEDAGKKAAEHGVRTLEVEVKG--------PGSGRESALRALQAVGFHITSIRDVTPIPHNGVR 122 The following BLAST results are available for this feature:
BLAST of BQ623292 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 302
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623292 ID=BQ623292; Name=BQ623292; organism=Citrus sinensis; type=EST; length=670bpback to top |