BQ623303

Overview
NameBQ623303
Unique NameBQ623303
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length434
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8732 contig Csv1_Contig8732:626..1059. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623303 vs. ExPASy Swiss-Prot
Match: INO1A_XENLA (Inositol-3-phosphate synthase 1-A OS=Xenopus laevis GN=isyna1-A PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 2.243e-16
Identity = 38/63 (60.32%), Postives = 52/63 (82.54%), Query Frame = 2
Query:    5 EGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 193
            E + +F +FH V +ILS+L KAPLVP GTPV+NA  +QR  +ENILRAC+GL+P+N+M+LE+K
Sbjct:  442 ETDQEFQTFHSVLSILSFLCKAPLVPAGTPVINAFFRQRNCIENILRACLGLSPQNHMMLEHK 504          
BLAST of BQ623303 vs. ExPASy Swiss-Prot
Match: INO1_MOUSE (Inositol-3-phosphate synthase 1 OS=Mus musculus GN=Isyna1 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 6.525e-16
Identity = 37/55 (67.27%), Postives = 48/55 (87.27%), Query Frame = 2
Query:   29 FHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 193
            FH V ++LS+L KAPLVPPG+PVVNAL +QR+ +ENI RACVGL P+N+M+LE+K
Sbjct:  453 FHTVLSLLSFLFKAPLVPPGSPVVNALFRQRSCIENIFRACVGLPPQNHMLLEHK 507          
BLAST of BQ623303 vs. ExPASy Swiss-Prot
Match: INO1_DICDI (Inositol-3-phosphate synthase OS=Dictyostelium discoideum GN=ino1 PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 8.522e-16
Identity = 37/63 (58.73%), Postives = 50/63 (79.37%), Query Frame = 2
Query:    5 EGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 193
            + + +F +FHPV ++LSYL KAP+VP    VVNAL KQRA +ENI +ACVG+AP+NNM+LE +
Sbjct:  448 QDDDQFATFHPVLSLLSYLLKAPIVPKHATVVNALFKQRACIENIFKACVGIAPDNNMLLEQR 510          
BLAST of BQ623303 vs. ExPASy Swiss-Prot
Match: INO1_DROME (Inositol-3-phosphate synthase OS=Drosophila melanogaster GN=Inos PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 3.351e-12
Identity = 33/55 (60.00%), Postives = 43/55 (78.18%), Query Frame = 2
Query:   29 FHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 193
            F PV ++LSYL KAPLVP G+ VVN+L +QRA +ENILR C+GL P ++M LE +
Sbjct:  459 FKPVLSLLSYLCKAPLVPQGSQVVNSLFRQRAAIENILRGCIGLPPISHMTLEQR 513          
The following BLAST results are available for this feature:
BLAST of BQ623303 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 24
Match NameE-valueIdentityDescription
INO1A_XENLA2.243e-1660.32Inositol-3-phosphate synthase 1-A OS=Xenopus laevi... [more]
INO1_MOUSE6.525e-1667.27Inositol-3-phosphate synthase 1 OS=Mus musculus GN... [more]
INO1_DICDI8.522e-1658.73Inositol-3-phosphate synthase OS=Dictyostelium dis... [more]
INO1_DROME3.351e-1260.00Inositol-3-phosphate synthase OS=Drosophila melano... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00394 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00394 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623303 ID=BQ623303; Name=BQ623303; organism=Citrus sinensis; type=EST; length=434bp
AGCTGAAGGAGAGGGAAAATTCCACTCTTTCCACCCTGTGGCTACAATTC
TCAGCTACCTCACCAAGGCTCCTCTGGTCCCTCCAGGCACACCAGTGGTG
AATGCGCTGTCGAAGCAGCGTGCAATGCTTGAGAACATTCTGAGGGCTTG
CGTTGGCTTGGCTCCTGAGAACAACATGATTTTGGAATACAAGTGAAGAA
CTTGCAGGGGAGAAAAGTGGAAGAACCGGTATTCCCTTTCTCTGTCACCA
ATCAAAGCTGTGGTGGTCCATTTAATTACTGATTGTAATGTCTTGTGTCA
TGAAATTGTGGTTAATATTAGTGTCCTGTATGTTTGCTCTTTTATTTTTT
TAATGAAGGTGCTGGAGTGTAGCCCATTGCCTTTGTAGCTCATTTCGGAG
CATGCAATCTCTTGTATTGCAAGTAGATAATATA
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