BQ623304
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of BQ623304 vs. ExPASy Swiss-Prot
Match: PSA6_SCHPO (Probable proteasome subunit alpha type-6 OS=Schizosaccharomyces pombe GN=SPBC646.16 PE=2 SV=1) HSP 1 Score: 209.149 bits (531), Expect = 1.168e-53 Identity = 107/187 (57.22%), Postives = 136/187 (72.73%), Query Frame = 3 Query: 3 RLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDP-AFTFQETVQTAISTLQSVL 560 RL+QVEYAFKA AG+TS+GV GK+ CV++QKKVPDKL+D ++V H+FPITK +G + TG ADAR V +AR EAAEF +K GY MP DVLAK +A+ +QV TQ A MRPLGV ++++D+E GP LFK DPAG + G+KATSAG K+ E IN+LEK+ K D +TV+T I L S L Sbjct: 19 RLYQVEYAFKAFNNAGITSVGVTGKNCACVISQKKVPDKLIDASTVKHVFPITKGIGCVMTGSIADARAQVSRARSEAAEFEYKNGYPMPCDVLAKRMANIAQVSTQRAAMRPLGVAMTLVAVDDEIGPSLFKLDPAGFYIGYKATSAGPKQTETINWLEKRFKKDGIPSNLTDTVETGIQALMSSL 205
BLAST of BQ623304 vs. ExPASy Swiss-Prot
Match: PSA6_DROME (Proteasome subunit alpha type-6 OS=Drosophila melanogaster GN=Prosalpha1 PE=2 SV=2) HSP 1 Score: 191.43 bits (485), Expect = 2.520e-48 Identity = 100/186 (53.76%), Postives = 131/186 (70.43%), Query Frame = 3 Query: 3 RLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVL 560 RL+QVEYAFKA+ +T++ ++ D V TQKKV +K + +VTHLF ITK +G TG AD+R+ VQ+ARYEAA FR+KYGYEMPVDVL + IAD +QVYTQ+A MRPLG ++++ D E GP ++K DPAG+F G KA S G K EA ++LEKK K P + ++ +Q AIS L SVL Sbjct: 21 RLYQVEYAFKAIAQENITTVALKSGDCAVVATQKKVTEKNIVPETVTHLFRITKDIGCAMTGRIADSRSQVQKARYEAANFRYKYGYEMPVDVLCRRIADINQVYTQNAEMRPLGCSMVLIAYDNEIGPSVYKTDPAGYFSGFKACSVGAKTLEANSYLEKKYK--PNLSEEKAIQLAISCLSSVL 204
BLAST of BQ623304 vs. ExPASy Swiss-Prot
Match: PSA6_YEAST (Proteasome component C7-alpha OS=Saccharomyces cerevisiae GN=SCL1 PE=1 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 7.331e-48 Identity = 90/164 (54.88%), Postives = 121/164 (73.78%), Query Frame = 3 Query: 3 RLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMK 494 RL+QVEYAFKA + S+ VRGKD V++QKKVPDKLLD T+V+++F I++ +G++ G DAR +A+ EAAEFR+KYGY+MP DVLAK +A+ SQ+YTQ AYMRPLGV+ +S+DEE GP ++K DPAG++ G+KAT+ G K+QE LE K Sbjct: 24 RLYQVEYAFKATNQTNINSLAVRGKDCTVVISQKKVPDKLLDPTTVSYIFCISRTIGMVVNGPIPDARNAALRAKAEAAEFRYKYGYDMPCDVLAKRMANLSQIYTQRAYMRPLGVILTFVSVDEELGPSIYKTDPAGYYVGYKATATGPKQQEITTNLENHFK 187
BLAST of BQ623304 vs. ExPASy Swiss-Prot
Match: PSA6_CAEEL (Proteasome subunit alpha type-6 OS=Caenorhabditis elegans GN=pas-1 PE=1 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 1.481e-40 Identity = 79/186 (42.47%), Postives = 126/186 (67.74%), Query Frame = 3 Query: 3 RLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVL 560 R++QVEYAFKA+ + +T++ V+G D+ + QK+VPD L+ +VT ++ I++ +G A GM DA+ +++A+ EAA +++K GY+MP ++LAK +AD +Q YTQ+A MR LG + +S D+E GP +++ DPAG++ G K S G+K+ A +FLEKK+K T E ++ AI LQ+ L Sbjct: 21 RVYQVEYAFKAINSTNLTAVAVKGADAAVIAVQKRVPDSLIVADTVTSVYQISQSVGCCAIGMIPDAKFQIKRAQGEAASWKYKNGYDMPCELLAKKMADLNQYYTQNAEMRSLGCALLFISYDDEKGPEVYRVDPAGYYRGMKGVSVGVKQLPATSFLEKKIKKKSELTSTEAIELAIEALQTSL 206
BLAST of BQ623304 vs. ExPASy Swiss-Prot
Match: PSMA_METKA (Proteasome subunit alpha OS=Methanopyrus kandleri GN=psmA PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 3.906e-33 Identity = 75/182 (41.21%), Postives = 113/182 (62.09%), Query Frame = 3 Query: 3 RLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTL 548 RLFQVEYA +AVK G T++G++ ++ V + K+V KL++ S+ ++ I ++G G+ ADAR LV++AR EA +R+ YG + VDVL K I D QVYTQH +RP G ++ +D + G RLF+ DP+G HKAT+ G QEA++ E++ + D T QE ++ A+ L Sbjct: 22 RLFQVEYAREAVKR-GTTALGIKVEEGVVLGVDKRVTSKLIEPESIEKVYQIDTHIGAATAGLVADARVLVERARIEAQTYRYTYGEPIDVDVLVKAICDLKQVYTQHGGVRPFGTALLIAGVDTK-GCRLFETDPSGALTEHKATAIGEGRQEALDVFEEEYRED--MTLQEAIELAVRAL 199
BLAST of BQ623304 vs. ExPASy Swiss-Prot
Match: PSA1_TRYBB (Proteasome subunit alpha type-1 OS=Trypanosoma brucei brucei PE=2 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 4.318e-32 Identity = 83/192 (43.23%), Postives = 117/192 (60.94%), Query Frame = 3 Query: 6 LFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSID--EECG---PRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTF--QETVQTAISTLQSVL 560 L+QVEYAFKAV AG+ ++ +R KD+V V TQ VPDKL+ ++T L+ + G+ TG D + LVQ+AR EA+E++++YG M V VLAK D +QV TQ A MR +G + + ++ +E G P+++ DPAG H A + G K+ EA FLEKK KN P T +E A++ LQS L Sbjct: 19 LYQVEYAFKAVTYAGLLTVAIRCKDAVLVFTQHSVPDKLMRPETITSLYNVNDNTGVCITGRAPDGKALVQKARNEASEYKYRYGMPMLVSVLAKPWQDMAQVRTQQAGMRLMGTIMTFVGMEQNDEDGAWIPQIYCVDPAGGAAVH-ACAVGKKQIEACAFLEKKQKNAPFHTLSQKEAAMIALAALQSAL 209
BLAST of BQ623304 vs. ExPASy Swiss-Prot
Match: PSMA_THESM (Proteasome subunit alpha OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=psmA PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 3.421e-29 Identity = 68/187 (36.36%), Postives = 113/187 (60.43%), Query Frame = 3 Query: 3 RLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQ 563 RLFQV+YA +AVK G T++GV+ KD V + +K+V KL++ S +F I ++ ++G+ ADAR LV +AR EA +R YG +P+ VL K I D Q++TQ+ +RP G ++ ++E+ P LF+ DP+G +F KA + G A+ E+K +++ T +E ++ A+ L +++ Sbjct: 22 RLFQVQYAREAVKR-GATAVGVKCKDGVVLAVEKRVTSKLIEPESYEKIFQIDDHIAAASSGIIADARVLVDRARLEAQIYRLTYGEPVPLTVLVKKICDLKQMHTQYGGVRPFGAALLMAGVNEK--PELFETDPSGAYFEWKAVAIGSGRNTAMAIFEEKYRDE--MTLEEAIKLAVLALSKIME 203
BLAST of BQ623304 vs. ExPASy Swiss-Prot
Match: PSMA_METJA (Proteasome subunit alpha OS=Methanocaldococcus jannaschii GN=psmA PE=1 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 9.955e-29 Identity = 70/182 (38.46%), Postives = 108/182 (59.34%), Query Frame = 3 Query: 3 RLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTL 548 RL+QVEYA +AV+ G T+IG+ KD V + +++ KL+ S+ +F I ++ +G+ ADAR L+ +AR EA +R YG E+ +++LAK I D Q YTQH +RP GV ++ ID+ RLF+ DP+G +KAT+ G + LEK+ ++D T E ++ AI+ L Sbjct: 21 RLYQVEYAREAVRR-GTTAIGIACKDGVVLAVDRRITSKLVKIRSIEKIFQIDDHVAAATSGLVADARVLIDRARLEAQIYRLTYGEEISIEMLAKKICDIKQAYTQHGGVRPFGVSLLIAGIDKN-EARLFETDPSGALIEYKATAIGSGRPVVMELLEKEYRDD--ITLDEGLELAITAL 198
BLAST of BQ623304 vs. ExPASy Swiss-Prot
Match: PSMA_THEVO (Proteasome subunit alpha OS=Thermoplasma volcanium GN=psmA PE=3 SV=2) HSP 1 Score: 124.02 bits (310), Expect = 4.941e-28 Identity = 71/187 (37.97%), Postives = 112/187 (59.89%), Query Frame = 3 Query: 3 RLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQ 563 RLFQVEYA +AVK G T++G++ + V +++ KK+ KL++ S+ + I Y+ + +G+ ADAR L+ AR A + + YG + ++ L K +AD+ Q YTQ+ +RP GV + ID + GPRLF CDPAG +KAT+ G + ++FLEK+ K + +E V I L++ L+ Sbjct: 20 RLFQVEYAREAVKK-GSTALGLKFSNGVLLISDKKIRSKLIEQNSLEKIQLIDDYVAAVTSGLVADARVLIDFARISAQQEKVTYGSLVNIENLVKRVADQMQQYTQYGGVRPYGVSLIFAGID-QIGPRLFDCDPAGTINEYKATAIGSGKDAVVSFLEKEYKE--GLSEKEAVTLGIKALKASLE 202
BLAST of BQ623304 vs. ExPASy Swiss-Prot
Match: PSMA_THEAC (Proteasome subunit alpha OS=Thermoplasma acidophilum GN=psmA PE=1 SV=2) HSP 1 Score: 123.635 bits (309), Expect = 6.453e-28 Identity = 72/187 (38.50%), Postives = 112/187 (59.89%), Query Frame = 3 Query: 3 RLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQ 563 RLFQVEYA +AVK G T++G++ + V +++ KKV +L++ S+ + I Y+ + +G+ ADAR LV AR A + + YG + ++ L K +AD+ Q YTQ+ +RP GV + ID + GPRLF CDPAG +KAT+ G + ++FLE++ K + +E V I L+S L+ Sbjct: 20 RLFQVEYAREAVKK-GSTALGMKFANGVLLISDKKVRSRLIEQNSIEKIQLIDDYVAAVTSGLVADARVLVDFARISAQQEKVTYGSLVNIENLVKRVADQMQQYTQYGGVRPYGVSLIFAGID-QIGPRLFDCDPAGTINEYKATAIGSGKDAVVSFLEREYKEN--LPEKEAVTLGIKALKSSLE 202 The following BLAST results are available for this feature:
BLAST of BQ623304 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 174
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623304 ID=BQ623304; Name=BQ623304; organism=Citrus sinensis; type=EST; length=563bpback to top |