BQ623304
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ623304 vs. ExPASy Swiss-Prot
Match: PSA3_HUMAN (Proteasome subunit alpha type-3 OS=Homo sapiens GN=PSMA3 PE=1 SV=2) HSP 1 Score: 104.375 bits (259), Expect = 4.051e-22 Identity = 61/161 (37.89%), Postives = 91/161 (56.52%), Query Frame = 3 Query: 3 RLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEK 485 R+FQVEYA KAV+ + T+IG+R KD V +K V KL + S LF + +++G+ G+ ADAR+L AR EA+ FR +GY +P+ LA +A YT ++ +RP G M+ S G +L+ DP+G +G+ + G Q A +EK Sbjct: 20 RVFQVEYAMKAVENSS-TAIGIRCKDGVVFGVEKLVLSKLYEEGSNKRLFNVDRHVGMAVAGLLADARSLADIAREEASNFRSNFGYNIPLKHLADRVAMYVHAYTLYSAVRPFGCSFMLGSYSVNDGAQLYMIDPSGVSYGYWGCAIGKARQAAKTEIEK 179
BLAST of BQ623304 vs. ExPASy Swiss-Prot
Match: PSA3_BOVIN (Proteasome subunit alpha type-3 OS=Bos taurus GN=PSMA3 PE=1 SV=3) HSP 1 Score: 104.375 bits (259), Expect = 4.051e-22 Identity = 61/161 (37.89%), Postives = 91/161 (56.52%), Query Frame = 3 Query: 3 RLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEK 485 R+FQVEYA KAV+ + T+IG+R KD V +K V KL + S LF + +++G+ G+ ADAR+L AR EA+ FR +GY +P+ LA +A YT ++ +RP G M+ S G +L+ DP+G +G+ + G Q A +EK Sbjct: 20 RVFQVEYAMKAVENSS-TAIGIRCKDGVVFGVEKLVLSKLYEEGSNKRLFNVDRHVGMAVAGLLADARSLADIAREEASNFRSNFGYNIPLKHLADRVAMYVHAYTLYSAVRPFGCSFMLGSYSVNDGAQLYMIDPSGVSYGYWGCAIGKARQAAKTEIEK 179
BLAST of BQ623304 vs. ExPASy Swiss-Prot
Match: PSA3_DICDI (Proteasome subunit alpha type-3 OS=Dictyostelium discoideum GN=psmA3 PE=2 SV=2) HSP 1 Score: 103.99 bits (258), Expect = 5.291e-22 Identity = 60/161 (37.27%), Postives = 94/161 (58.39%), Query Frame = 3 Query: 3 RLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEK 485 +LFQV+YA KAV+ +G T + ++ KD V + +K VP K+L S + I ++G+ G ADAR L+ +AR EA ++ YG +P+ VL++ IA + ++T + +RP G + ID + GP+LF +P+G G+ S G +Q A N LEK Sbjct: 20 KLFQVDYANKAVENSG-TLVAIKAKDGVVLGVEKLVPSKMLCSGSNRRVHHIDTHVGVAIAGFLADARQLITRARSEAKNYKSTYGQPIPIKVLSQRIASYNHMHTLYGSVRPFGCSIAITGID-QYGPQLFLVEPSGSCVGYFGASLGKGKQAAKNELEK 178
BLAST of BQ623304 vs. ExPASy Swiss-Prot
Match: PSMA1_HALMA (Proteasome subunit alpha 1 OS=Haloarcula marismortui GN=psmA1 PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 6.910e-22 Identity = 67/185 (36.22%), Postives = 99/185 (53.51%), Query Frame = 3 Query: 3 RLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSV 557 RL+QVEYA +AVK G SIGVR D V + K++ L++ +SV + ++G+ + G ADAR L+ AR +A + +YG + V+ L K I D Q YTQ RP G VA+++ PRLF+ DP+G + KA + G + ++LE+ D E V A++ L SV Sbjct: 22 RLYQVEYAREAVKR-GTASIGVRTSDGVVLAVDKRIRSPLMERSSVEKIHKADDHIGIASAGHVADARQLIDFARRQAQVNQLRYGEPVGVETLTKEITDYIQQYTQVGGARPFG-VALIIGGIVNGEPRLFETDPSGTPYEWKALAVGADRGDIRDYLEEHY--DEGMDLDEGVDLALAALASV 202
BLAST of BQ623304 vs. ExPASy Swiss-Prot
Match: PSA5_TRYBB (Proteasome subunit alpha type-5 OS=Trypanosoma brucei brucei PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 6.910e-22 Identity = 65/193 (33.68%), Postives = 104/193 (53.89%), Query Frame = 3 Query: 3 RLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHA-----YMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAIN-FLEKKMKNDPAFTFQETVQTAISTLQSVLQ 563 R+FQ+EYA +A+K G TS+G++ D+V + +K+VP L+D +SV + I ++G + +GM ADAR LV AR EA RF Y M V+ A D S + + RP GV ++ +DE GP+L++ DP+G + + A + G + A F E+ +N T +E + L+ V++ Sbjct: 20 RIFQIEYAIEAIKL-GSTSLGIQTPDAVIIAAEKRVPSTLVDPSSVNKILEIDHHIGTVLSGMVADARILVDHARVEAQNHRFTYDEPMSVESCALATCDLSVQFGESGGRKKLMSRPFGVSLLIAGVDEN-GPQLWQTDPSGTYTRYDAQAIGGGAEAAQTVFSERYHRN---MTVEEAENLTVQILRQVME 207
BLAST of BQ623304 vs. ExPASy Swiss-Prot
Match: PSA2_TRYBB (Proteasome subunit alpha type-2 OS=Trypanosoma brucei brucei PE=2 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 9.025e-22 Identity = 62/183 (33.88%), Postives = 95/183 (51.91%), Query Frame = 3 Query: 3 RLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQ 551 RL Q+EYA A + G T++GV+ D V + +KK L D ++ +F + ++G +G+ D R LV AR +R Y MP+ L + I+ Q +TQ +RP G +V D G L++ DP+G F+ KATS G +A FLEK+ N+ ++ V TA+ TL+ Sbjct: 16 RLVQIEYATTAA-SKGTTALGVKATDGVVIAAEKKTTSPLADSLTLHKVFALDDHVGCTYSGIGPDCRVLVDAARRACQRYRLTYHEPMPISQLVRQISFLFQEFTQSGGVRPFGCSLLVAGADSR-GNHLYQLDPSGTFWTWKATSIGKGSPDARTFLEKRYTNE--MEIEDAVHTALLTLK 194
BLAST of BQ623304 vs. ExPASy Swiss-Prot
Match: PSA7L_HUMAN (Proteasome subunit alpha type-7-like OS=Homo sapiens GN=PSMA8 PE=1 SV=3) HSP 1 Score: 102.834 bits (255), Expect = 1.179e-21 Identity = 62/192 (32.29%), Postives = 102/192 (53.12%), Query Frame = 3 Query: 6 LFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGL------LATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQ 563 LFQVEYA +AVK G T++G+RG + V + +KK KL D +V + + ++ + + G+TADAR ++ +AR E + + V+ + ++IA Q YTQ RP G+ A+++ D++ RL++ DP+G + KA + G + FLEK D + E ++ AI L V+Q Sbjct: 18 LFQVEYAQEAVKK-GSTAVGIRGTNIVVLGVEKKSVAKLQDERTVRKICALDDHVCMAFAVLTIFIGLTADARVVINRARVECQSHKLTVEDPVTVEYITRFIATLKQKYTQSNGRRPFGISALIVGFDDDGISRLYQTDPSGTYHAWKANAIGRSAKTVREFLEKNYTEDAIASDSEAIKLAIKALLEVVQ 208
BLAST of BQ623304 vs. ExPASy Swiss-Prot
Match: PSA4B_ORYSJ (Proteasome subunit alpha type-4-2 OS=Oryza sativa subsp. japonica GN=Os06g0167600 PE=2 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 1.539e-21 Identity = 62/187 (33.16%), Postives = 99/187 (52.94%), Query Frame = 3 Query: 3 RLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHT-SVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVL 560 RL+QVEYA +A+ AG +++GV D V +V +KKV KLL + S ++ I +L G+ +DA L+ AR A + Y +PV+ L + + D Q YTQ +RP GV + D+ G +L+ DP+G++ G KA + G Q A + L++ ++ T +E V A+ L + Sbjct: 17 RLYQVEYAMEAIGNAG-SALGVLAADGVVLVGEKKVTSKLLQTSRSAEKMYKIDSHLACAVAGIMSDANILLNTARLHAQRYALSYQEPIPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKHHGFQLYMSDPSGNYSGWKAAAVGANSQAAQSMLKQDYRD--GLTREEAVALALKVLSKTM 200
BLAST of BQ623304 vs. ExPASy Swiss-Prot
Match: PSA4B_ORYSI (Proteasome subunit alpha type-4-2 OS=Oryza sativa subsp. indica GN=OsI_021067 PE=1 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 1.539e-21 Identity = 62/187 (33.16%), Postives = 99/187 (52.94%), Query Frame = 3 Query: 3 RLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHT-SVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVL 560 RL+QVEYA +A+ AG +++GV D V +V +KKV KLL + S ++ I +L G+ +DA L+ AR A + Y +PV+ L + + D Q YTQ +RP GV + D+ G +L+ DP+G++ G KA + G Q A + L++ ++ T +E V A+ L + Sbjct: 17 RLYQVEYAMEAIGNAG-SALGVLAADGVVLVGEKKVTSKLLQTSRSAEKMYKIDSHLACAVAGIMSDANILLNTARLHAQRYALSYQEPIPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKHHGFQLYMSDPSGNYSGWKAAAVGANSQAAQSMLKQDYRD--GLTREEAVALALKVLSKTM 200
BLAST of BQ623304 vs. ExPASy Swiss-Prot
Match: PSA4A_ORYSJ (Proteasome subunit alpha type-4-1 OS=Oryza sativa subsp. japonica GN=PAC1 PE=2 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 1.539e-21 Identity = 62/187 (33.16%), Postives = 99/187 (52.94%), Query Frame = 3 Query: 3 RLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHT-SVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVL 560 RL+QVEYA +A+ AG +++GV D V +V +KKV KLL + S ++ I +L G+ +DA L+ AR A + Y +PV+ L + + D Q YTQ +RP GV + D+ G +L+ DP+G++ G KA + G Q A + L++ ++ T +E V A+ L + Sbjct: 17 RLYQVEYAMEAIGNAG-SALGVLAADGVVLVGEKKVTSKLLQTSRSAEKMYKIDSHLACAVAGIMSDANILLNTARLHAQRYALSYQEPIPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKHHGFQLYMSDPSGNYSGWKAAAVGANSQAAQSMLKQDYRD--GMTREEAVALALKVLSKTM 200 The following BLAST results are available for this feature:
BLAST of BQ623304 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 174
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623304 ID=BQ623304; Name=BQ623304; organism=Citrus sinensis; type=EST; length=563bpback to top |