BQ623304
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of BQ623304 vs. ExPASy Swiss-Prot
Match: PSA3_ORYSJ (Proteasome subunit alpha type-3 OS=Oryza sativa subsp. japonica GN=PAG1 PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.262e-15 Identity = 51/161 (31.68%), Postives = 86/161 (53.42%), Query Frame = 3 Query: 3 RLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEK 485 R+FQVEYA KAV +G T +G++ KD + + +K V K++ S + + + GL G+ AD R +V +A+ EAA + YG + V LA +A + T + ++RP G ++ D + GP+L+ +P+G + + + G Q A +EK Sbjct: 20 RVFQVEYATKAVDNSG-TVVGIKCKDGIVLGVEKLVTSKMMLEGSNRRIHSVHWHSGLAVAGLAADGRQIVSRAKSEAASYEKVYGEPISVKELADRVASYVHLCTLYWWLRPFGCGVILGGYDRD-GPQLYMIEPSGVSYKYFGAALGKGRQAAKTEIEK 178
BLAST of BQ623304 vs. ExPASy Swiss-Prot
Match: PSA3_CAEEL (Proteasome subunit alpha type-3 OS=Caenorhabditis elegans GN=pas-7 PE=1 SV=3) HSP 1 Score: 82.8037 bits (203), Expect = 1.262e-15 Identity = 55/161 (34.16%), Postives = 82/161 (50.93%), Query Frame = 3 Query: 3 RLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEK 485 R+FQVEYA KAV AG T I +RGK+ V VV K + KL + +F + +G+ G D L A EA ++ Y MP+ +A +A+ ++T RP G A +S +++ G RLF +P+G + +KA + G Q A +EK Sbjct: 20 RIFQVEYAQKAVDNAG-TMIAIRGKNGVVVVADKLISSKLYTDNANPRMFNVNDNVGVAVAGNYPDGFALKNYAYGEAMKWLKDYREPMPIQNIANSVAEYIHIHTL-GISRPFGAGAFFMSWNKQTGGRLFLVEPSGLNYEYKAWAVGKHRQAAKAEIEK 178
BLAST of BQ623304 vs. ExPASy Swiss-Prot
Match: PSA5_ENCCU (Probable proteasome subunit alpha type-5 OS=Encephalitozoon cuniculi GN=PUP2 PE=1 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 2.153e-15 Identity = 53/192 (27.60%), Postives = 99/192 (51.56%), Query Frame = 3 Query: 3 RLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQH-----AYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQ 563 R+ Q+EYA KA+ G T+IGVR K+ V + ++KK+ L + SV + I ++ L +G++ D +T+V+++R YG + V+ L K+++ S + + + RP GV ++ D E PRL+ DP+G + +KA + G + LE + + ++++ + TL V++ Sbjct: 16 RIHQIEYAMKAMNL-GTTTIGVRTKEFVILCSEKKILSTLQNPKSVVKHYKIYDHIVLGFSGISGDTKTIVKRSRDFCISHTHMYGENISVERLLKYLSSLSLRFGEEDEAKMIFRRPFGVSLIIAGFDTE--PRLYSLDPSGSYISYKAKAIGSGHEVVEGILENEYEEYSG--LDQSLRKVLCTLSKVMK 202
BLAST of BQ623304 vs. ExPASy Swiss-Prot
Match: PSA1_YEAST (Proteasome component PRE5 OS=Saccharomyces cerevisiae GN=PRE5 PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 3.800e-12 Identity = 47/163 (28.83%), Postives = 79/163 (48.47%), Query Frame = 3 Query: 3 RLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKM 491 RLFQVEYA +A+K VT +G+R +V K+ D+L + + +++GL G+ DAR L R + + ++ V+ + DK+Q TQ RP GV +++ D+ G L + P+G+ T+ G + Q A +LE+ + Sbjct: 18 RLFQVEYALEAIKQGSVT-VGLRSNTHAVLVALKRNADELSSYQK--KIIKCDEHMGLSLAGLAPDARVLSNYLRQQCNYSSLVFNRKLAVERAGHLLCDKAQKNTQSYGGRPYGVGLLIIGYDKS-GAHLLEFQPSGNVTELYGTAIGARSQGAKTYLERTL 176 The following BLAST results are available for this feature:
BLAST of BQ623304 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 174
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >BQ623304 ID=BQ623304; Name=BQ623304; organism=Citrus sinensis; type=EST; length=563bpback to top |