BQ623304
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ623304 vs. ExPASy Swiss-Prot
Match: PSMA_PYRHO (Proteasome subunit alpha OS=Pyrococcus horikoshii GN=psmA PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 2.711e-26 Identity = 64/187 (34.22%), Postives = 108/187 (57.75%), Query Frame = 3 Query: 3 RLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQ 563 RLFQV YA +AVK G T++GV+ + V + +K++ +L++ S +F I ++ ++G+ ADAR LV +AR EA R YG P+ V+ K I D Q++TQ+ +RP G ++ ++E+ P L++ DP+G +F KA + G A+ E+K K+D + +E ++ AI L ++ Sbjct: 22 RLFQVNYAREAVKR-GATAVGVKCNEGVVLAVEKRITSRLIEPESYEKIFQIDDHIAAASSGIIADARVLVNRARLEAQIHRLTYGEPAPLAVIVKKICDLKQMHTQYGGVRPFGAALLMAGVNEK--PELYETDPSGAYFAWKAVAIGSGRNTAMAIFEEKYKDD--MSLEEAIKLAIFALAKTME 203
BLAST of BQ623304 vs. ExPASy Swiss-Prot
Match: PSMA_METMA (Proteasome subunit alpha OS=Methanosarcina mazei GN=psmA PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 2.711e-26 Identity = 61/166 (36.75%), Postives = 97/166 (58.43%), Query Frame = 3 Query: 3 RLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKND 500 RLFQVEYA +AVK G T++G++ D V ++ K++ +L++ S+ +F I ++G +G+ ADAR+LV +AR EA R Y + V+V++K I D Q YTQ+ +RP G ++ +D+ PRLF+ DP+G +KAT+ G + E + D Sbjct: 21 RLFQVEYAREAVKR-GTTAVGIKAADGVVLLVDKRITSRLVEAESIEKIFQIDDHIGAATSGLVADARSLVDRARVEAQVNRVSYDELIGVEVISKKICDHKQTYTQYGGVRPYGTALLIAGVDDN-KPRLFETDPSGALLEYKATAIGAGRNAVVEVFEADYRED 184
BLAST of BQ623304 vs. ExPASy Swiss-Prot
Match: PSMA_METM6 (Proteasome subunit alpha OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=psmA PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 4.624e-26 Identity = 67/187 (35.83%), Postives = 102/187 (54.55%), Query Frame = 3 Query: 3 RLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQ 563 RL+QVEYA +AV+ G T++G++ D V + +++ KL+D +S+ +F I ++ +G+ ADAR L+ +AR EA R YG + V+ LAK I D Q YTQH RP G+ ++ ID RLF+ DP+G +KAT+ G A+ LE K D E ++ A+ L + Sbjct: 22 RLYQVEYAREAVRR-GTTAVGIKCNDGVVLAVDRRITSKLIDVSSIEKIFQIDDHIVAATSGLVADARVLIDRARLEAQMNRISYGEAITVEALAKKICDIKQAYTQHGGARPFGLALLITGIDRH-SARLFETDPSGALIEYKATAIGSGRPIAMEVLESKY--DENMIVSEGMELALYALSKTTE 204
BLAST of BQ623304 vs. ExPASy Swiss-Prot
Match: PSMA_PYRFU (Proteasome subunit alpha OS=Pyrococcus furiosus GN=psmA PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 7.888e-26 Identity = 62/187 (33.16%), Postives = 107/187 (57.22%), Query Frame = 3 Query: 3 RLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQ 563 RLFQV YA +AVK G T++GV+ + V + +K++ +L++ S +F I ++ ++G+ ADAR LV +AR EA +R YG PV V+ K I D Q++TQ+ +RP G ++ I++ P L++ DP+G +F KA + G A+ E+K ++D ++ ++ A+ L ++ Sbjct: 22 RLFQVNYAREAVKR-GATAVGVKCGEGVVLAVEKRITSRLIEPDSYEKIFQIDDHIAAASSGIIADARVLVNRARLEAQIYRLTYGEPAPVSVIVKKICDLKQMHTQYGGVRPFGAALLMAGINDR--PELYETDPSGAYFAWKAVAIGSGRNTAMAIFEEKYRDD--MNLEDAIKLALMALAKTME 203
BLAST of BQ623304 vs. ExPASy Swiss-Prot
Match: PSA2_CARAU (Proteasome subunit alpha type-2 OS=Carassius auratus GN=psma2 PE=2 SV=3) HSP 1 Score: 116.701 bits (291), Expect = 7.888e-26 Identity = 69/183 (37.70%), Postives = 103/183 (56.28%), Query Frame = 3 Query: 3 RLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQ 551 +L Q+EYA AV AAG S+G++ + V + T+KK L D SV + PITK++G++ +GM D R LV++AR A ++ Y +P L + +A Q YTQ +RP GV ++ DE+ P LF+ DP+G +F KAT+ G FLEK+ D ++ + TAI TL+ Sbjct: 18 KLVQIEYALAAV-AAGAPSVGIKASNGVVLATEKKQKSILYDEQSVHKIEPITKHIGMVYSGMGPDYRVLVRRARKLAQQYFLVYQEPIPTGQLVQRVASVMQEYTQSGGVRPFGVSLLIAGWDED-RPYLFQSDPSGAYFAWKATAMGKSYVNGKTFLEKRYNED--LELEDAIHTAILTLK 196
BLAST of BQ623304 vs. ExPASy Swiss-Prot
Match: PSMA_METS5 (Proteasome subunit alpha OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=psmA PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.030e-25 Identity = 65/186 (34.95%), Postives = 109/186 (58.60%), Query Frame = 3 Query: 6 LFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQ 563 L+QV+YAF+AVK G T++GV+ K++V ++ +KK +LLD S+ +F + ++G G+ +D R L+ AR + + R Y + +D L K I+D Q+YTQH +RP GV +V +D +LF +P+G F ++A + G A ++LEK K D + +ET+ A++ L+ L+ Sbjct: 23 LYQVDYAFEAVKK-GWTTLGVKTKNAVVILGEKKKASQLLDVDSIEKVFLLDDHVGCSFAGLASDGRILIDYARNSSLQHRLVYDEPISIDYLTKLISDVKQMYTQHGGVRPFGVALIVGGVDRGV-TKLFMTEPSGQFMPYQAVAIGQGGYNATDYLEKNYKED--LSVEETILLALNALKVTLK 204
BLAST of BQ623304 vs. ExPASy Swiss-Prot
Match: PSA2_DICDI (Proteasome subunit alpha type-2 OS=Dictyostelium discoideum GN=psmA2 PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.030e-25 Identity = 66/183 (36.07%), Postives = 115/183 (62.84%), Query Frame = 3 Query: 3 RLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQ 551 +L Q+E+A +A A+G ++IG++ K+ V ++T+KK+ L+D TSV + IT+ +GL+ GM D+R L+++AR E+ ++ +Y ++PV L + +A Q +TQ +RP GV +V DE+ GP L++ DP+G +F KAT+ G + FLEK+ +D ++ +QTA+ T++ Sbjct: 17 KLVQIEHALQAA-ASGGSAIGIKAKNGVVLITEKKL-HSLVDVTSVQKISMITENIGLVYAGMGPDSRVLIKKARKESEKYYKQYKEKIPVLQLVRELASIMQEFTQSGGVRPFGVSLLVAGFDEK-GPHLYQVDPSGSYFAWKATAIGKNMVSSKTFLEKRYSDD--LEIEDAIQTALITIK 194
BLAST of BQ623304 vs. ExPASy Swiss-Prot
Match: PSMA_AERPE (Proteasome subunit alpha OS=Aeropyrum pernix GN=psmA PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.345e-25 Identity = 60/186 (32.26%), Postives = 102/186 (54.84%), Query Frame = 3 Query: 6 LFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQ 563 L+QV YAF+AVK G TS+G++ + V + +K+ L+D + ++ I ++G+ GM D R L+ AR R YG PV+++AK +AD Q YTQH +RP GV + ++ + ++++ DP G +F KA + G EQ A EK ++D + +E + A+ L ++++ Sbjct: 25 LYQVRYAFEAVKK-GWTSLGIKTNEGVVIAAEKRFIGPLVDIDDIDKIYKIDDHIGVAFAGMGGDGRILIDYARVFTVRHRLLYGEPPPVELVAKVVADVKQAYTQHGGVRPFGVALIFAGVNPDGTTKVYRTDPGGQYFSFKAIAIGSGEQVANEMFEKHYRSD--MSLEEATKLALKILYAIIR 207
BLAST of BQ623304 vs. ExPASy Swiss-Prot
Match: PSA4_PETHY (Proteasome subunit alpha type-4 OS=Petunia hybrida GN=PAC1 PE=2 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.345e-25 Identity = 68/187 (36.36%), Postives = 104/187 (55.61%), Query Frame = 3 Query: 3 RLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLD-HTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVL 560 RL+QVEYA +A+ AG ++IG+ KD V +V +KKV KLL TS ++ I ++ G+ +DA L+ AR +A + F Y MPV+ L + + D Q YTQ+ + P GV + D+ G +LF DP+G++ G KA + G Q A + L++ K+D T +E VQ A+ L + Sbjct: 17 RLYQVEYAMEAIGNAG-SAIGISSKDGVVLVGEKKVTSKLLQTSTSSEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTFSYQEPMPVEQLVQSLCDTKQGYTQYGGLPPFGVSFLFAGWDKNFGFQLFMSDPSGNYAGWKAAAIGANNQAAQSMLKQDYKDD--ITREEAVQLALKVLSKTM 200
BLAST of BQ623304 vs. ExPASy Swiss-Prot
Match: PSMA_THEGJ (Proteasome subunit alpha OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=psmA PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 2.997e-25 Identity = 64/187 (34.22%), Postives = 105/187 (56.15%), Query Frame = 3 Query: 3 RLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQ 563 RLFQV YA +AVK G T++GV+ K V + +K++ +L++ +S +F I ++ +G+ ADAR LV +AR EA +R YG +P+ VL K I D Q +TQ+ +RP G ++ ++E+ P L++ DP+G +F KA + G A+ E+ +D + ++ AI L L+ Sbjct: 22 RLFQVNYAREAVKR-GATAVGVKWKGGVVLAVEKRITSRLIEPSSYEKIFQIDDHIAAAPSGIIADARVLVDRARLEAQIYRLTYGEPVPLTVLVKKICDLKQAHTQYGGVRPFGAALLMAGVNEK--PELYETDPSGAYFEWKAVAIGSGRNTAMAIFEEHYSDD--IDMEGAIKLAILALAKTLE 203 The following BLAST results are available for this feature:
BLAST of BQ623304 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 174
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623304 ID=BQ623304; Name=BQ623304; organism=Citrus sinensis; type=EST; length=563bpback to top |