BQ623307

Overview
NameBQ623307
Unique NameBQ623307
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length636
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1523 contig Csv1_Contig1523:90..725. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623307 vs. ExPASy Swiss-Prot
Match: RAD24_SCHPO (DNA damage checkpoint protein rad24 OS=Schizosaccharomyces pombe GN=rad24 PE=1 SV=2)

HSP 1 Score: 288.115 bits (736), Expect = 2.522e-77
Identity = 142/208 (68.27%), Postives = 171/208 (82.21%), Query Frame = 3
Query:   12 SSKERENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELD 635
            S+  RE+ VY+AKLAEQAERY+ MV+ MK+VA  D ELTVEERNLLSV YKNVIGARRASWRI+SSIEQKEE+KGN    + IKEYRQK+E EL  IC DI+TV+++HLIP+A++ ES VF+YKMKGDYYRYLAEF  G++++ +A  S++           +L PTHPIRLGLALNFSVFYYEI+NSP+RAC+LAKQAFDEAISELD
Sbjct:    2 STTSREDAVYLAKLAEQAERYEGMVENMKSVASTDQELTVEERNLLSVAYKNVIGARRASWRIVSSIEQKEESKGNTAQVELIKEYRQKIEQELDTICQDILTVLEKHLIPNAASAESKVFYYKMKGDYYRYLAEFAVGEKRQHSADQSLEGYKAASEIATAELAPTHPIRLGLALNFSVFYYEILNSPDRACYLAKQAFDEAISELD 209          
BLAST of BQ623307 vs. ExPASy Swiss-Prot
Match: RAD25_SCHPO (DNA damage checkpoint protein rad25 OS=Schizosaccharomyces pombe GN=rad25 PE=1 SV=1)

HSP 1 Score: 285.034 bits (728), Expect = 2.135e-76
Identity = 141/207 (68.12%), Postives = 171/207 (82.61%), Query Frame = 3
Query:   15 SKERENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELD 635
            S  REN VY+AKLAEQAERY+EMV+ MK VA  + +L+VEERNLLSV YKN+IGARRASWRI+SSIEQKEE++GN   A  IKEYR+K+E ELSDIC+D+++V+++HLIP+A+ GES VF+YKMKGDYYRYLAEF  G+  KEAA +S++           +LPPT P+RLGLALNFSVFYYEI++SPE ACHLAKQ FDEAISELD
Sbjct:    2 SNSRENSVYLAKLAEQAERYEEMVENMKKVACSNDKLSVEERNLLSVAYKNIIGARRASWRIISSIEQKEESRGNTRQAALIKEYRKKIEDELSDICHDVLSVLEKHLIPAATTGESKVFYYKMKGDYYRYLAEFTVGEVCKEAADSSLEAYKAASDIAVAELPPTDPMRLGLALNFSVFYYEILDSPESACHLAKQVFDEAISELD 208          
BLAST of BQ623307 vs. ExPASy Swiss-Prot
Match: 1433_TRIHA (14-3-3 protein homolog OS=Trichoderma harzianum PE=2 SV=1)

HSP 1 Score: 283.878 bits (725), Expect = 4.757e-76
Identity = 138/203 (67.98%), Postives = 170/203 (83.74%), Query Frame = 3
Query:   27 ENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELD 635
            E+ VY+AKLAEQAERY+EMV+ MK VA  D +LTVEERNLLSV YKNVIGARRASWRI++SIEQKEE+KGN      IKEYRQK+E+EL+ IC+DI+ V+D+HLIPSA +GES VF++K+KGDY+RYLAEF  GD +K++A  S++           +LPPTHPIRLGLALNFSVFYYEI+N+P++ACHLAKQAFD+AI+ELD
Sbjct:    4 EDAVYLAKLAEQAERYEEMVENMKIVASEDRDLTVEERNLLSVAYKNVIGARRASWRIVTSIEQKEESKGNSSQVTLIKEYRQKIENELAKICDDILEVLDQHLIPSAKSGESKVFYHKIKGDYHRYLAEFAIGDRRKDSADKSLEAYKAATEVAQTELPPTHPIRLGLALNFSVFYYEILNAPDQACHLAKQAFDDAIAELD 206          
BLAST of BQ623307 vs. ExPASy Swiss-Prot
Match: 1433_MESCR (14-3-3-like protein OS=Mesembryanthemum crystallinum GN=GBF PE=2 SV=1)

HSP 1 Score: 281.952 bits (720), Expect = 1.808e-75
Identity = 144/212 (67.92%), Postives = 171/212 (80.66%), Query Frame = 3
Query:    6 MASSKERENFVYVAKLAEQAERYDEMVDAMKNVAKLD--VELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELD 635
            M+S   RE  VY+AKLAEQAERY+EMV+ M+ VAK+    EL+VEERNLLSV YKNVIGARRASWRI+SSIEQKEE++GNE +   IKEYR K+E+ELS IC+ I+ +++ HLIPSAS  ES VF+ KMKGDY+RYLAEFK G E+KEAA N++            +L PTHPIRLGLALNFSVFYYEI+NSP+RAC+LAKQAFDEAISELD
Sbjct:    1 MSSESSREENVYMAKLAEQAERYEEMVEFMEKVAKMTDTEELSVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVSTIKEYRGKIETELSKICDGILNLLESHLIPSASTAESKVFYLKMKGDYHRYLAEFKTGAERKEAAENTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELD 212          
BLAST of BQ623307 vs. ExPASy Swiss-Prot
Match: 14335_ORYSJ (14-3-3-like protein GF14-E OS=Oryza sativa subsp. japonica GN=GF14E PE=2 SV=1)

HSP 1 Score: 281.952 bits (720), Expect = 1.808e-75
Identity = 144/206 (69.90%), Postives = 168/206 (81.55%), Query Frame = 3
Query:   24 RENFVYVAKLAEQAERYDEMVDAMKNVAKL--DVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELD 635
            RE  VY+AKLAEQAERY+EMV+ M+ VAK     ELTVEERNLLSV YKNVIGARRASWRI+SSIEQKEE++GNE     IKEYR K+E+ELS IC+ I+ ++D HL+PS++A ES VF+ KMKGDYYRYLAEFK G E+K+AA N+M            +LPPTHPIRLGLALNFSVFYYEI+NSP+RAC+LAKQAFDEAISELD
Sbjct:    9 REENVYMAKLAEQAERYEEMVEFMEKVAKTVDSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDRCTLIKEYRGKIETELSKICDGILKLLDSHLVPSSTAPESKVFYLKMKGDYYRYLAEFKTGAERKDAAENTMVAYKAAQDIALAELPPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELD 214          
BLAST of BQ623307 vs. ExPASy Swiss-Prot
Match: 1433_CANAL (14-3-3 protein homolog OS=Candida albicans GN=BMH1 PE=1 SV=2)

HSP 1 Score: 280.026 bits (715), Expect = 6.869e-75
Identity = 138/204 (67.65%), Postives = 167/204 (81.86%), Query Frame = 3
Query:   24 RENFVYVAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELD 635
            RE+ VY+AKLAEQAERY+EMV+ MK VA    EL+VEERNLLSV YKNVIGARRASWRI+SSIEQKEEAKGNE     I++YR K+E+ELS IC DI++V+ +HLI SA  GES VF+YKMKGDY+RYLAEF   +++KEAA  S++           +LPPTHPIRLGLALNFSVFYYEI+NSP+RACHLAKQAFD+A+++L+
Sbjct:    5 REDSVYLAKLAEQAERYEEMVENMKAVASSGQELSVEERNLLSVAYKNVIGARRASWRIVSSIEQKEEAKGNESQVALIRDYRAKIEAELSKICEDILSVLSDHLITSAQTGESKVFYYKMKGDYHRYLAEFAIAEKRKEAADLSLEAYKAASDVAVTELPPTHPIRLGLALNFSVFYYEILNSPDRACHLAKQAFDDAVADLE 208          
BLAST of BQ623307 vs. ExPASy Swiss-Prot
Match: 1433A_HORVU (14-3-3-like protein A OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 279.641 bits (714), Expect = 8.971e-75
Identity = 144/206 (69.90%), Postives = 169/206 (82.04%), Query Frame = 3
Query:   24 RENFVYVAKLAEQAERYDEMVDAMKNVAKL-DV-ELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELD 635
            RE  VY+AKLAEQAERY+EMV+ M+ VAK  DV ELTVEERNLLSV YKNVIGARRASWRI+SSIEQKEE++GNE     IKEYR ++E+ELS IC+ I+ ++D HL+PSA+A ES VF+ KMKGDY+RYLAEFK G E+KEAA N++            DLP THPIRLGLALNFSVFYYEI+NSP+RAC+LAKQAFDEAI+ELD
Sbjct:    8 REENVYMAKLAEQAERYEEMVEFMEKVAKTADVGELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEAYVASIKEYRTRIETELSKICDGILKLLDSHLVPSATAAESKVFYLKMKGDYHRYLAEFKAGAERKEAAENTLVAYKSAQDIALADLPTTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELD 213          
BLAST of BQ623307 vs. ExPASy Swiss-Prot
Match: 1433B_HORVU (14-3-3-like protein B OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 278.87 bits (712), Expect = 1.530e-74
Identity = 143/213 (67.14%), Postives = 168/213 (78.87%), Query Frame = 3
Query:    3 AMASSKERENFVYVAKLAEQAERYDEMVDAMKNVAKL--DVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELD 635
            A  +   RE  VY+AKLAEQAERY+EMV+ M+ VAK     ELTVEERNLLSV YKNVIGARRASWRI+SSIEQKEE++GNE     IK+YR K+E EL+ IC+ I+ ++D HL+PS++A ES VF+ KMKGDYYRYLAEFK G E+K+AA N+M            +LPPTHPIRLGLALNFSVFYYEI+NSP+RAC LAKQAFDEAISELD
Sbjct:    2 AQPAELSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDRVTLIKDYRGKIEVELTKICDGILKLLDSHLVPSSTAPESKVFYLKMKGDYYRYLAEFKSGTERKDAAENTMVAYKAAQEIALAELPPTHPIRLGLALNFSVFYYEILNSPDRACDLAKQAFDEAISELD 214          
BLAST of BQ623307 vs. ExPASy Swiss-Prot
Match: 14336_ORYSJ (14-3-3-like protein GF14-F OS=Oryza sativa subsp. japonica GN=GF14F PE=1 SV=2)

HSP 1 Score: 278.87 bits (712), Expect = 1.530e-74
Identity = 143/206 (69.42%), Postives = 169/206 (82.04%), Query Frame = 3
Query:   24 RENFVYVAKLAEQAERYDEMVDAMKNVAKL-DV-ELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELD 635
            RE  VY+AKLAEQAERY+EMV+ M+ VAK  DV ELTVEERNLLSV YKNVIGARRASWRI+SSIEQKEE++GNE     IKEYR ++E+ELS IC+ I+ ++D HL+PSA+A ES VF+ KMKGDY+RYLAEFK G E+KEAA N++            DLP THPIRLGLALNFSVFYYEI+NSP+RAC+LAKQAFD+AI+ELD
Sbjct:    8 REENVYMAKLAEQAERYEEMVEFMEKVAKTTDVGELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEAYVASIKEYRSRIETELSKICDGILKLLDSHLVPSATAAESKVFYLKMKGDYHRYLAEFKSGAERKEAAENTLVAYKSAQDIALADLPTTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDDAIAELD 213          
BLAST of BQ623307 vs. ExPASy Swiss-Prot
Match: 14333_ORYSJ (14-3-3-like protein GF14-C OS=Oryza sativa subsp. japonica GN=GF14C PE=1 SV=1)

HSP 1 Score: 278.485 bits (711), Expect = 1.999e-74
Identity = 144/206 (69.90%), Postives = 170/206 (82.52%), Query Frame = 3
Query:   24 RENFVYVAKLAEQAERYDEMVDAMKNVAK-LDVE-LTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAKGNEVNAKRIKEYRQKVESELSDICNDIMTVIDEHLIPSASAGESTVFFYKMKGDYYRYLAEFKFGDEKKEAAANSMKXXXXXXXXXXXDLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELD 635
            RE  VY+AKLAEQAERY+EMV+ M+ VAK +DVE LTVEERNLLSV YKNVIGARRASWRI+SSIEQKEE +GNE +   IKEYR K+E+ELS IC+ I+ ++D HL+PS++A ES VF+ KMKGDY+RYLAEFK G E+KEAA ++M            DL PTHPIRLGLALNFSVFYYEI+NSP++AC+LAKQAFDEAISELD
Sbjct:    3 REENVYMAKLAEQAERYEEMVEYMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIVSSIEQKEEGRGNEEHVTLIKEYRGKIEAELSKICDGILKLLDSHLVPSSTAAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTMVAYKAAQDIALADLAPTHPIRLGLALNFSVFYYEILNSPDKACNLAKQAFDEAISELD 208          
The following BLAST results are available for this feature:
BLAST of BQ623307 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
RAD24_SCHPO2.522e-7768.27DNA damage checkpoint protein rad24 OS=Schizosacch... [more]
RAD25_SCHPO2.135e-7668.12DNA damage checkpoint protein rad25 OS=Schizosacch... [more]
1433_TRIHA4.757e-7667.9814-3-3 protein homolog OS=Trichoderma harzianum PE... [more]
1433_MESCR1.808e-7567.9214-3-3-like protein OS=Mesembryanthemum crystallin... [more]
14335_ORYSJ1.808e-7569.9014-3-3-like protein GF14-E OS=Oryza sativa subsp. ... [more]
1433_CANAL6.869e-7567.6514-3-3 protein homolog OS=Candida albicans GN=BMH1... [more]
1433A_HORVU8.971e-7569.9014-3-3-like protein A OS=Hordeum vulgare PE=2 SV=1[more]
1433B_HORVU1.530e-7467.1414-3-3-like protein B OS=Hordeum vulgare PE=2 SV=1[more]
14336_ORYSJ1.530e-7469.4214-3-3-like protein GF14-F OS=Oryza sativa subsp. ... [more]
14333_ORYSJ1.999e-7469.9014-3-3-like protein GF14-C OS=Oryza sativa subsp. ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00398 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00398 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623307 ID=BQ623307; Name=BQ623307; organism=Citrus sinensis; type=EST; length=636bp
CGGCCATGGCTTCCTCTAAAGAACGCGAAAACTTCGTCTACGTCGCCAAG
CTCGCTGAACAAGCCGAGCGCTACGACGAGATGGTGGATGCGATGAAAAA
TGTTGCGAAGCTTGATGTGGAATTGACGGTTGAGGAGCGCAACTTGCTCT
CTGTTGGCTACAAGAATGTAATTGGTGCTCGAAGAGCATCATGGAGGATA
CTTTCGTCAATTGAGCAAAAGGAAGAAGCGAAAGGGAATGAAGTGAATGC
GAAGCGGATCAAGGAGTATAGGCAAAAGGTTGAATCTGAATTGTCGGACA
TTTGCAATGATATCATGACTGTCATTGATGAGCATCTTATTCCTTCAGCA
AGTGCTGGTGAATCAACTGTGTTCTTCTATAAGATGAAAGGAGATTATTA
TCGGTACCTTGCTGAATTCAAGTTTGGCGATGAGAAGAAAGAGGCTGCTG
CTAATTCAATGAAAGCGTATGAGACAGCTACCACTGCTGCAGAGGCTGAT
TTGCCACCTACACATCCCATCCGATTGGGTTTGGCTCTGAATTTCTCTGT
CTTTTATTATGAGATCATGAATTCTCCTGAAAGGGCTTGCCATCTTGCAA
AACAAGCTTTTGATGAAGCTATTTCCGAGCTGGACA
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