BQ623312

Overview
NameBQ623312
Unique NameBQ623312
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length627
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623312 vs. ExPASy Swiss-Prot
Match: AL1A1_MOUSE (Retinal dehydrogenase 1 OS=Mus musculus GN=Aldh1a1 PE=1 SV=5)

HSP 1 Score: 267.7 bits (683), Expect = 3.421e-71
Identity = 127/206 (61.65%), Postives = 156/206 (75.73%), Query Frame = 2
Query:    2 VPGDGNYHIQTLHEPIGVAGQIVPWNFPVLLFTWKVAPALACGNTIVLKSAEQTPLTALYLAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIGWRSLQEWG*TSPQIDPEQ 619
            +P DG+    T  EPIGV GQI+PWNFP+L+F WK+ PAL+CGNT+V+K AEQTPLTAL+LA L  EAG PPGV+N+V GYGPTAGAA++SHMDVDK++FTG    GK+++E A KSNLK VTLELGGKSP I+F DAD+D AVE AH  +FY+QGQCC A SR +V E VYDEFV+++  RA + +    L       PQID EQ
Sbjct:  145 IPSDGDIFTYTRREPIGVCGQIIPWNFPMLMFIWKIGPALSCGNTVVVKPAEQTPLTALHLASLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTQVGKLIKEAAGKSNLKRVTLELGGKSPCIVFADADLDIAVEFAHHGVFYHQGQCCVAASRIFVEESVYDEFVKRSVERAKKYVLGNPLTPGINQGPQIDKEQ 350          
BLAST of BQ623312 vs. ExPASy Swiss-Prot
Match: AL1A2_CHICK (Retinal dehydrogenase 2 OS=Gallus gallus GN=ALDH1A2 PE=2 SV=2)

HSP 1 Score: 267.314 bits (682), Expect = 4.468e-71
Identity = 123/207 (59.42%), Postives = 156/207 (75.36%), Query Frame = 2
Query:    2 VPGDGNYHIQTLHEPIGVAGQIVPWNFPVLLFTWKVAPALACGNTIVLKSAEQTPLTALYLAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIGWRSLQEWG*TSPQIDPEQF 622
            +P DG+Y   T HEPIGV GQI+PWNFP+L+F WK+APAL CGNT+V+K AEQTPL+ALY+  L  EAG PPGV+N++ G+GP  GAA+ASH+ +DK++FTG  + GK++QE A +SNLK VTLELGGKSP IIF DAD+D AVE AH  +F+NQGQCC AGSR YV E +Y+EFV ++  RA RR+            PQID +Q+
Sbjct:  162 IPVDGDYFTFTRHEPIGVCGQIIPWNFPLLMFAWKIAPALCCGNTVVIKPAEQTPLSALYMGALIKEAGFPPGVVNILPGFGPIVGAAIASHVGIDKIAFTGSTEVGKLIQEAAGRSNLKRVTLELGGKSPNIIFADADLDYAVEQAHQGVFFNQGQCCTAGSRIYVEESIYEEFVRRSVERAKRRVVGSPFDPTTEQGPQIDKKQY 368          
BLAST of BQ623312 vs. ExPASy Swiss-Prot
Match: AL1A1_RABIT (Retinal dehydrogenase 1 OS=Oryctolagus cuniculus GN=ALDH1A1 PE=2 SV=1)

HSP 1 Score: 266.159 bits (679), Expect = 9.953e-71
Identity = 121/207 (58.45%), Postives = 158/207 (76.33%), Query Frame = 2
Query:    2 VPGDGNYHIQTLHEPIGVAGQIVPWNFPVLLFTWKVAPALACGNTIVLKSAEQTPLTALYLAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIGWRSLQEWG*TSPQIDPEQF 622
            +P DG++   T HEP+GV GQI+PWNFP+++  WK+ PAL+CGNT+++K AEQTPLTAL++A L  EAG PPGV+N+V GYGPTAGAA++SHMD+DK++FTG  + GK+++E A KSNLK VTLELGGKSP I+F DAD+D AVE AH  +FY+QGQCC A SR +V E +YDEFV ++  RA + +    L       PQID EQ+
Sbjct:  140 MPMDGDFFCYTRHEPVGVCGQIIPWNFPLVMLIWKIGPALSCGNTVIVKPAEQTPLTALHVASLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDIDKVAFTGSTEVGKLIKEAAGKSNLKRVTLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGNPLAPEVNQGPQIDKEQY 346          
BLAST of BQ623312 vs. ExPASy Swiss-Prot
Match: AL1B1_PONAB (Aldehyde dehydrogenase X, mitochondrial OS=Pongo abelii GN=ALDH1B1 PE=2 SV=1)

HSP 1 Score: 261.536 bits (667), Expect = 2.452e-69
Identity = 122/208 (58.65%), Postives = 157/208 (75.48%), Query Frame = 2
Query:    2 VPGDGNYHIQTLHEPIGVAGQIVPWNFPVLLFTWKVAPALACGNTIVLKSAEQTPLTALYLAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIGWRSLQEWG*TSPQIDPEQFQ 625
            +P DG +   T HEPIGV GQI+PWNFP+++  WK+APALA GNT+V+K AEQTPL+ALYLA L  EAG PPGV+N+++GYGPTAGAA+A HMDVDK++FTG  + G ++Q+ A  SNLK VTLELGGKSP I+  DAD++ AVE  H ALF+N GQCCCAGSRT+V E +Y+EF+E+   +A +R      +      PQ+D EQF+
Sbjct:  161 IPMDGQHFCFTRHEPIGVCGQIIPWNFPLVMQGWKLAPALATGNTVVMKVAEQTPLSALYLASLIKEAGFPPGVVNIITGYGPTAGAAIAQHMDVDKVAFTGSTEVGHLIQKAAGDSNLKRVTLELGGKSPSIVLADADMEHAVEQCHEALFFNMGQCCCAGSRTFVEESIYNEFLERTVEKAKQRKVGNPFELDTQQGPQVDKEQFE 368          
BLAST of BQ623312 vs. ExPASy Swiss-Prot
Match: AL1A7_MOUSE (Aldehyde dehydrogenase, cytosolic 1 OS=Mus musculus GN=Aldh1a7 PE=2 SV=1)

HSP 1 Score: 261.536 bits (667), Expect = 2.452e-69
Identity = 123/206 (59.71%), Postives = 154/206 (74.76%), Query Frame = 2
Query:    2 VPGDGNYHIQTLHEPIGVAGQIVPWNFPVLLFTWKVAPALACGNTIVLKSAEQTPLTALYLAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIGWRSLQEWG*TSPQIDPEQ 619
            +P DGN    T  EPIGV GQI+PWN P+++FTWK+ PAL+CGNT+V+K AEQTPLTAL++A L  EAG PPGV+N+V GYGPTAG A++SHMD+DK+SFTG  + GK+++E A KSNLK VTLELGGKSP I+F DAD+D AVE AH  +F++QGQ C A SR +V E +YDEFV ++  RA + I    L       PQID EQ
Sbjct:  145 IPSDGNIFTYTRREPIGVCGQIIPWNGPLIIFTWKLGPALSCGNTVVVKPAEQTPLTALHMASLIKEAGFPPGVVNIVPGYGPTAGGAISSHMDIDKVSFTGSTEVGKLIKEAAGKSNLKRVTLELGGKSPCIVFADADLDSAVEFAHQGVFFHQGQICVAASRLFVEESIYDEFVRRSVERAKKYILGNPLNSGINQGPQIDKEQ 350          
BLAST of BQ623312 vs. ExPASy Swiss-Prot
Match: AL1B1_RAT (Aldehyde dehydrogenase X, mitochondrial OS=Rattus norvegicus GN=Aldh1b1 PE=1 SV=1)

HSP 1 Score: 261.151 bits (666), Expect = 3.202e-69
Identity = 121/208 (58.17%), Postives = 156/208 (75.00%), Query Frame = 2
Query:    2 VPGDGNYHIQTLHEPIGVAGQIVPWNFPVLLFTWKVAPALACGNTIVLKSAEQTPLTALYLAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIGWRSLQEWG*TSPQIDPEQFQ 625
            +P DG +   T HEP+GV GQI+PWNFP+++  WK+APALA GNT+V+K AEQTPL+ALYLA L  EAG PPGV+N+++GYGPTAGAA+A HMDVDK++FTG  + G ++Q+ A  SNLK VTLELGGKSP I+  DAD+D AV+  H ALF+N GQCCCAGSRT+V E +Y EF+E+   +A +R      +      PQ+D EQF+
Sbjct:  163 IPMDGEHFCFTRHEPVGVCGQIIPWNFPLVMQGWKLAPALATGNTVVMKVAEQTPLSALYLASLIKEAGFPPGVVNIITGYGPTAGAAIAQHMDVDKVAFTGSTEVGHLIQKAAGDSNLKRVTLELGGKSPSIVLADADMDHAVDQCHEALFFNMGQCCCAGSRTFVEESIYHEFLERTVEKAKKRKVGNPFELDTQQGPQVDKEQFE 370          
BLAST of BQ623312 vs. ExPASy Swiss-Prot
Match: AL1B1_HUMAN (Aldehyde dehydrogenase X, mitochondrial OS=Homo sapiens GN=ALDH1B1 PE=1 SV=2)

HSP 1 Score: 261.151 bits (666), Expect = 3.202e-69
Identity = 121/208 (58.17%), Postives = 157/208 (75.48%), Query Frame = 2
Query:    2 VPGDGNYHIQTLHEPIGVAGQIVPWNFPVLLFTWKVAPALACGNTIVLKSAEQTPLTALYLAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIGWRSLQEWG*TSPQIDPEQFQ 625
            +P DG +   T HEP+GV GQI+PWNFP+++  WK+APALA GNT+V+K AEQTPL+ALYLA L  EAG PPGV+N+++GYGPTAGAA+A HMDVDK++FTG  + G ++Q+ A  SNLK VTLELGGKSP I+  DAD++ AVE  H ALF+N GQCCCAGSRT+V E +Y+EF+E+   +A +R      +      PQ+D EQF+
Sbjct:  161 IPMDGQHFCFTRHEPVGVCGQIIPWNFPLVMQGWKLAPALATGNTVVMKVAEQTPLSALYLASLIKEAGFPPGVVNIITGYGPTAGAAIAQHMDVDKVAFTGSTEVGHLIQKAAGDSNLKRVTLELGGKSPSIVLADADMEHAVEQCHEALFFNMGQCCCAGSRTFVEESIYNEFLERTVEKAKQRKVGNPFELDTQQGPQVDKEQFE 368          
BLAST of BQ623312 vs. ExPASy Swiss-Prot
Match: AL1B1_MOUSE (Aldehyde dehydrogenase X, mitochondrial OS=Mus musculus GN=Aldh1b1 PE=2 SV=1)

HSP 1 Score: 259.61 bits (662), Expect = 9.316e-69
Identity = 120/208 (57.69%), Postives = 157/208 (75.48%), Query Frame = 2
Query:    2 VPGDGNYHIQTLHEPIGVAGQIVPWNFPVLLFTWKVAPALACGNTIVLKSAEQTPLTALYLAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIGWRSLQEWG*TSPQIDPEQFQ 625
            +P DG +   T HEP+GV GQI+PWNFP+++  WK+APALA GNT+V+K AEQTPL+ALYLA L  EAG PPGV+N+++GYGPTAGAA+A HMDVDK++FTG  + G ++Q+ A +SNLK VTLELGGKSP I+  DAD++ AV+  H ALF+N GQCCCAGSRT+V E +Y EF+E+   +A +R      +      PQ+D EQF+
Sbjct:  163 IPMDGEHFCFTRHEPVGVCGQIIPWNFPLVMQGWKLAPALATGNTVVMKVAEQTPLSALYLASLIKEAGFPPGVVNIITGYGPTAGAAIAQHMDVDKVAFTGSTEVGHLIQKAAGESNLKRVTLELGGKSPSIVLADADMEHAVDQCHEALFFNMGQCCCAGSRTFVEESIYREFLERTVEKAKQRKVGNPFELDTQQGPQVDKEQFE 370          
BLAST of BQ623312 vs. ExPASy Swiss-Prot
Match: ALDH2_HORSE (Aldehyde dehydrogenase, mitochondrial OS=Equus caballus GN=ALDH2 PE=1 SV=1)

HSP 1 Score: 258.84 bits (660), Expect = 1.589e-68
Identity = 127/207 (61.35%), Postives = 154/207 (74.40%), Query Frame = 2
Query:    2 VPGDGNYHIQTLHEPIGVAGQIVPWNFPVLLFTWKVAPALACGNTIVLKSAEQTPLTALYLAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIGWRSLQEWG*TSPQIDPEQF 622
            +P DG++   T HEP+GV GQI+PWNFP+L+   K+ PALA GN +V+K AEQTPLTALY+A L  EAG PPGV+NVV G+GPTAGAA+ASH DVDK++FTG  + G ++Q  A +SNLK VTLELGGKSP II  DAD+D AVE AHFALF+NQGQCC AGSRT+V E VY EFVE++ ARA  R+            PQ+D  QF
Sbjct:  144 IPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAAKLGPALATGNVVVMKVAEQTPLTALYVANLTKEAGFPPGVVNVVPGFGPTAGAAIASHEDVDKVAFTGSTEVGHLIQVAAGRSNLKKVTLELGGKSPNIIVSDADMDWAVEQAHFALFFNQGQCCGAGSRTFVQEDVYAEFVERSVARAKSRVVGNPFDSQTEQGPQVDETQF 350          
BLAST of BQ623312 vs. ExPASy Swiss-Prot
Match: AL1A7_RAT (Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus GN=Aldh1a7 PE=1 SV=2)

HSP 1 Score: 255.758 bits (652), Expect = 1.345e-67
Identity = 121/206 (58.74%), Postives = 152/206 (73.79%), Query Frame = 2
Query:    2 VPGDGNYHIQTLHEPIGVAGQIVPWNFPVLLFTWKVAPALACGNTIVLKSAEQTPLTALYLAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIGWRSLQEWG*TSPQIDPEQ 619
            +P DG+    T  EPIGV GQI+PWN P++LF WK+  AL+CGNT+++K AEQTPLTALY+A L  EAG PPGV+NVV GYG TAGAA++SHMD+DK+SFTG  + GK+++E A KSNLK VTLELGGKSP I+F DAD+D AVE AH  +F++QGQ C A SR +V E +YDEFV ++  RA + +    L       PQID EQ
Sbjct:  145 IPSDGDVFTYTRREPIGVCGQIIPWNGPLILFIWKIGAALSCGNTVIVKPAEQTPLTALYMASLIKEAGFPPGVVNVVPGYGSTAGAAISSHMDIDKVSFTGSTEVGKLIKEAAGKSNLKRVTLELGGKSPCIVFADADLDSAVEFAHQGVFFHQGQICVAASRLFVEESIYDEFVRRSVERAKKYVLGNPLDSGISQGPQIDKEQ 350          
The following BLAST results are available for this feature:
BLAST of BQ623312 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
AL1A1_MOUSE3.421e-7161.65Retinal dehydrogenase 1 OS=Mus musculus GN=Aldh1a1... [more]
AL1A2_CHICK4.468e-7159.42Retinal dehydrogenase 2 OS=Gallus gallus GN=ALDH1A... [more]
AL1A1_RABIT9.953e-7158.45Retinal dehydrogenase 1 OS=Oryctolagus cuniculus G... [more]
AL1B1_PONAB2.452e-6958.65Aldehyde dehydrogenase X, mitochondrial OS=Pongo a... [more]
AL1A7_MOUSE2.452e-6959.71Aldehyde dehydrogenase, cytosolic 1 OS=Mus musculu... [more]
AL1B1_RAT3.202e-6958.17Aldehyde dehydrogenase X, mitochondrial OS=Rattus ... [more]
AL1B1_HUMAN3.202e-6958.17Aldehyde dehydrogenase X, mitochondrial OS=Homo sa... [more]
AL1B1_MOUSE9.316e-6957.69Aldehyde dehydrogenase X, mitochondrial OS=Mus mus... [more]
ALDH2_HORSE1.589e-6861.35Aldehyde dehydrogenase, mitochondrial OS=Equus cab... [more]
AL1A7_RAT1.345e-6758.74Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norv... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00403 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00403 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623312 ID=BQ623312; Name=BQ623312; organism=Citrus sinensis; type=EST; length=627bp
TGTCCCTGGTGATGGAAATTACCATATTCAAACTTTACATGAACCAATTG
GCGTTGCTGGCCAGATAGTTCCCTGGAACTTTCCTGTTCTCTTGTTTACT
TGGAAAGTAGCGCCTGCACTAGCTTGTGGTAATACTATTGTTCTAAAGTC
TGCTGAGCAAACGCCTTTGACTGCTCTGTATTTGGCAAAGCTATTCCATG
AGGCTGGTCTTCCCCCCGGTGTTTTGAATGTAGTCTCTGGTTATGGTCCA
ACAGCTGGTGCAGCTCTTGCCAGCCATATGGATGTGGACAAGCTGTCTTT
TACAGGACACTGTGATACTGGTAAGATTGTTCAGGAATTGGCTGCAAAAA
GCAACCTTAAGCCAGTAACCTTAGAACTTGGAGGGAAATCACCATTTATA
ATATTCGATGATGCTGATGTTGACCAGGCTGTGGAACTTGCACACTTTGC
TTTGTTCTATAATCAGGGACAATGTTGCTGTGCTGGATCTCGTACTTATG
TACATGAGCGTGTATATGACGAGTTTGTAGAAAAAGCAAAGGCACGTGCT
ATGAGGCGTATTGGTTGGCGATCCCTTCAAGAATGGGGGTGAACAAGTCC
TCAAATTGATCCAGAGCAATTTCAAAA
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