BQ623312

Overview
NameBQ623312
Unique NameBQ623312
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length627
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7410 contig Csv1_Contig7410:800..1425. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623312 vs. ExPASy Swiss-Prot
Match: ALDH_EMENI (Aldehyde dehydrogenase OS=Emericella nidulans GN=aldA PE=3 SV=2)

HSP 1 Score: 250.366 bits (638), Expect = 5.652e-66
Identity = 115/197 (58.38%), Postives = 150/197 (76.14%), Query Frame = 2
Query:   32 TLHEPIGVAGQIVPWNFPVLLFTWKVAPALACGNTIVLKSAEQTPLTALYLAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIGWRSLQEWG*TSPQIDPEQF 622
            T HEP+GV GQI+PWNFP+L+++WK+ PA+A GNT+VLK+AEQTPL+ALY AKL  EAG P GV+NV+SG+G TAGAA++SHMD+DK++FTG    G+ + + AAKSNLK VTLELGGKSP I+FDDAD+D A+  A+F +F+N GQCCCAGSR  V E +YD+FV + K RA +       ++     PQ+   QF
Sbjct:  150 TRHEPVGVCGQIIPWNFPLLMWSWKIGPAVAAGNTVVLKTAEQTPLSALYAAKLIKEAGFPAGVINVISGFGRTAGAAISSHMDIDKVAFTGSTLVGRTILQAAAKSNLKKVTLELGGKSPNIVFDDADIDNAISWANFGIFFNHGQCCCAGSRILVQEGIYDKFVARFKERAQKNKVGNPFEQDTFQGPQVSQLQF 346          
BLAST of BQ623312 vs. ExPASy Swiss-Prot
Match: ALDH1_MACPR (Aldehyde dehydrogenase, cytosolic 1 OS=Macroscelides proboscideus GN=ALDH1 PE=2 SV=1)

HSP 1 Score: 246.899 bits (629), Expect = 6.249e-65
Identity = 118/206 (57.28%), Postives = 150/206 (72.82%), Query Frame = 2
Query:    2 VPGDGNYHIQTLHEPIGVAGQIVPWNFPVLLFTWKVAPALACGNTIVLKSAEQTPLTALYLAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIGWRSLQEWG*TSPQIDPEQ 619
            +P DG +   T HEPIGV GQI PWN P++L   K+ PAL CGNT+++K AEQTPLTAL++A L  EAG PPGV+N+V GYGPTAGAA++SHMDVDK++FTG  + GK++QE AAKSNLK VTLELG K+P I+F DAD+D AVE AH  +F NQGQ C A S+ +V E +YDEFV+++  RA + +    L       PQI+  Q
Sbjct:  145 IPVDGEFFSYTRHEPIGVCGQIFPWNAPMILLACKIGPALCCGNTVIVKPAEQTPLTALHVASLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKMIQEAAAKSNLKRVTLELGAKNPCIVFADADLDSAVEFAHQGVFTNQGQSCIAASKLFVEETIYDEFVQRSVERAKKYVFGNPLTPGVNHGPQINKAQ 350          
BLAST of BQ623312 vs. ExPASy Swiss-Prot
Match: ALDH_CLAHE (Aldehyde dehydrogenase OS=Cladosporium herbarum GN=CLAH10 PE=1 SV=2)

HSP 1 Score: 245.358 bits (625), Expect = 1.818e-64
Identity = 113/194 (58.25%), Postives = 143/194 (73.71%), Query Frame = 2
Query:   41 EPIGVAGQIVPWNFPVLLFTWKVAPALACGNTIVLKSAEQTPLTALYLAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIGWRSLQEWG*TSPQIDPEQF 622
            EPIGV GQI+PWNFP+L++ WK+ PA+ACGNT+VLK+AEQTPL  L  A L  EAG PPGV+NV+SG+G  AGAAL+SHMDVDK++FTG    G+ + + AA SNLK VTLELGGKSP I+F+DAD+D A+   +F +F+N GQCCCAGSR YV E +YD+FV+K K RA + +            PQ+   QF
Sbjct:  152 EPIGVCGQIIPWNFPLLMWAWKIGPAIACGNTVVLKTAEQTPLGGLVAASLVKEAGFPPGVINVISGFGKVAGAALSSHMDVDKVAFTGSTVVGRTILKAAASSNLKKVTLELGGKSPNIVFEDADIDNAISWVNFGIFFNHGQCCCAGSRVYVQESIYDKFVQKFKERAQKNVVGDPFAADTFQGPQVSKVQF 345          
BLAST of BQ623312 vs. ExPASy Swiss-Prot
Match: AL1A3_MOUSE (Aldehyde dehydrogenase family 1 member A3 OS=Mus musculus GN=Aldh1a3 PE=2 SV=1)

HSP 1 Score: 244.973 bits (624), Expect = 2.374e-64
Identity = 118/207 (57.00%), Postives = 148/207 (71.50%), Query Frame = 2
Query:    2 VPGDGNYHIQTLHEPIGVAGQIVPWNFPVLLFTWKVAPALACGNTIVLKSAEQTPLTALYLAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIGWRSLQEWG*TSPQIDPEQF 622
            +P D N    T HEPIGV G I PWNFP+L+  WK+APAL CGNT+VLK AEQTPLTALYLA L  E G PPGV+N+V G+GPT GAA++SH  ++K++FTG  + GK+V+E A++SNLK VTLELGGK+P I+  DAD+D AVE AH  +F+NQGQCC A SR +V E+VY EFV ++   A +R             PQID +QF
Sbjct:  156 IPTDDNVVCFTRHEPIGVCGAITPWNFPLLMLAWKLAPALCCGNTVVLKPAEQTPLTALYLASLIKEVGFPPGVVNIVPGFGPTVGAAISSHPQINKIAFTGSTEVGKLVREAASRSNLKRVTLELGGKNPCIVCADADLDLAVECAHQGVFFNQGQCCTAASRVFVEEQVYGEFVRRSVEFAKKRPVGDPFDAKTEQGPQIDQKQF 362          
BLAST of BQ623312 vs. ExPASy Swiss-Prot
Match: AL1A3_HUMAN (Aldehyde dehydrogenase family 1 member A3 OS=Homo sapiens GN=ALDH1A3 PE=1 SV=2)

HSP 1 Score: 244.588 bits (623), Expect = 3.101e-64
Identity = 118/207 (57.00%), Postives = 148/207 (71.50%), Query Frame = 2
Query:    2 VPGDGNYHIQTLHEPIGVAGQIVPWNFPVLLFTWKVAPALACGNTIVLKSAEQTPLTALYLAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIGWRSLQEWG*TSPQIDPEQF 622
            +P D N    T HEPIGV G I PWNFP+L+  WK+APAL CGNT+VLK AEQTPLTALYL  L  EAG PPGV+N+V G+GPT GAA++SH  ++K++FTG  + GK+V+E A++SNLK VTLELGGK+P I+  DAD+D AVE AH  +F+NQGQCC A SR +V E+VY EFV ++   A +R             PQID +QF
Sbjct:  156 IPTDDNVVCFTRHEPIGVCGAITPWNFPLLMLVWKLAPALCCGNTMVLKPAEQTPLTALYLGSLIKEAGFPPGVVNIVPGFGPTVGAAISSHPQINKIAFTGSTEVGKLVKEAASRSNLKRVTLELGGKNPCIVCADADLDLAVECAHQGVFFNQGQCCTAASRVFVEEQVYSEFVRRSVEYAKKRPVGDPFDVKTEQGPQIDQKQF 362          
BLAST of BQ623312 vs. ExPASy Swiss-Prot
Match: ALDH1_ELEED (Aldehyde dehydrogenase, cytosolic 1 OS=Elephantulus edwardii GN=ALDH1 PE=1 SV=1)

HSP 1 Score: 244.202 bits (622), Expect = 4.050e-64
Identity = 117/206 (56.80%), Postives = 149/206 (72.33%), Query Frame = 2
Query:    2 VPGDGNYHIQTLHEPIGVAGQIVPWNFPVLLFTWKVAPALACGNTIVLKSAEQTPLTALYLAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIGWRSLQEWG*TSPQIDPEQ 619
            +P DG +   T HEPIGV G I PWN P++L   K+ PAL CGNT+++K AEQTPLTAL++A L  EAG PPGV+N+V GYGPTAGAA++SHMDVDK++FTG  + GK++QE AAKSNLK VTLELG K+P I+F DAD+D AVE AH  +F NQGQ C A S+ +V E +YDEFV+++  RA + +    L       PQI+  Q
Sbjct:  145 IPVDGEFFSYTRHEPIGVCGLIFPWNAPMILLACKIGPALCCGNTVIVKPAEQTPLTALHVASLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKMIQEAAAKSNLKRVTLELGAKNPCIVFADADLDSAVEFAHQGVFTNQGQSCIAASKLFVEEAIYDEFVQRSVERAKKYVFGNPLTPGVNHGPQINKAQ 350          
BLAST of BQ623312 vs. ExPASy Swiss-Prot
Match: AL1A3_RAT (Aldehyde dehydrogenase family 1 member A3 OS=Rattus norvegicus GN=Aldh1a3 PE=2 SV=1)

HSP 1 Score: 244.202 bits (622), Expect = 4.050e-64
Identity = 117/207 (56.52%), Postives = 148/207 (71.50%), Query Frame = 2
Query:    2 VPGDGNYHIQTLHEPIGVAGQIVPWNFPVLLFTWKVAPALACGNTIVLKSAEQTPLTALYLAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIGWRSLQEWG*TSPQIDPEQF 622
            +P D N    T HEPIGV G I PWNFP+L+  WK+APAL CGNT+VLK AEQTPLTALYLA L  E G PPGV+N+V G+GPT GAA++SH  ++K++FTG  + GK+V+E A++SNLK VTLELGG++P I+  DAD+D AVE AH  +F+NQGQCC A SR +V E+VY EFV ++   A +R             PQID +QF
Sbjct:  156 IPTDDNVMCFTRHEPIGVCGAITPWNFPLLMLAWKLAPALCCGNTVVLKPAEQTPLTALYLASLIKEVGFPPGVVNIVPGFGPTVGAAISSHPQINKIAFTGSTEVGKLVKEAASRSNLKRVTLELGGRNPCIVCADADLDLAVECAHQGVFFNQGQCCTAASRVFVEEQVYGEFVRRSVEFAKKRPVGDPFDAKTEQGPQIDQKQF 362          
BLAST of BQ623312 vs. ExPASy Swiss-Prot
Match: ALDHY_YEAST (Aldehyde dehydrogenase 2, mitochondrial OS=Saccharomyces cerevisiae GN=ALD2 PE=3 SV=1)

HSP 1 Score: 240.35 bits (612), Expect = 5.849e-63
Identity = 114/177 (64.41%), Postives = 137/177 (77.40%), Query Frame = 2
Query:   32 TLHEPIGVAGQIVPWNFPVLLFTWKVAPALACGNTIVLKSAEQTPLTALYLAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRI 562
            T HEP+GV G+I+PWN P+L++ WK+ PALA GNT+VLK  E TPLTAL +A L  EAG PPGV+NVVSGYGPTAGAA  SH D DKL+FTG    GK+V + AAKSNLK VTLELGGKSP I+F DAD+D AVE AHF +F+NQGQCC A SR  VHE +YDE VE+   +A +++
Sbjct:  183 TRHEPVGVCGEIIPWNIPLLMYIWKIGPALAAGNTVVLKPEELTPLTALTVATLIKEAGFPPGVVNVVSGYGPTAGAACLSHKDNDKLAFTGSTLVGKVVMKAAAKSNLKKVTLELGGKSPMIVFIDADLDWAVENAHFGVFFNQGQCCIAQSRITVHESIYDEIVERDLEKAKKQV 359          
BLAST of BQ623312 vs. ExPASy Swiss-Prot
Match: ALDH_ASPNG (Aldehyde dehydrogenase OS=Aspergillus niger GN=aldA PE=3 SV=1)

HSP 1 Score: 238.039 bits (606), Expect = 2.903e-62
Identity = 104/175 (59.43%), Postives = 140/175 (80.00%), Query Frame = 2
Query:   32 TLHEPIGVAGQIVPWNFPVLLFTWKVAPALACGNTIVLKSAEQTPLTALYLAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMR 556
            T HEPIGV GQI+PWNFP+L++ WK+ PA+A GNT+V+K+AEQTPL+ LY A +  EAG+P GV+NV+SG+G  AG+A++ HMD+DK++FTG    G+ + + AAKSNLK VTLELGGKSP I+F+DAD+D A+  A+F +FYN GQCCCAGSR  V E +YD+F+ + K RA++
Sbjct:  151 TRHEPIGVCGQIIPWNFPLLMWAWKIGPAIATGNTVVIKTAEQTPLSGLYAANVIKEAGIPAGVVNVISGFGRVAGSAISHHMDIDKVAFTGSTLVGRTILQAAAKSNLKKVTLELGGKSPNIVFNDADIDNAISWANFGIFYNHGQCCCAGSRILVQEGIYDKFIARLKERALQ 325          
BLAST of BQ623312 vs. ExPASy Swiss-Prot
Match: ALDH9_POLMI (Aldehyde dehydrogenase 9 (Fragment) OS=Polyandrocarpa misakiensis GN=ALDH9 PE=3 SV=1)

HSP 1 Score: 236.498 bits (602), Expect = 8.445e-62
Identity = 114/181 (62.98%), Postives = 138/181 (76.24%), Query Frame = 2
Query:   80 FPVLLFTWKVAPALACGNTIVLKSAEQTPLTALYLAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIGWRSLQEWG*TSPQIDPEQF 622
            FP+L+  WK+ PALACGNT+V+K+AEQTPLTALY+A L  EAG PPGV+N++SGYGPTAGAA++ HMDVDK++FTG  +T  IV E AAKSNLK V+LELGGKSP I+  D+D+D AV+  H  LF+N GQCCCAGSR YV E VYDEFV+K+  RA +R       E     PQID EQF
Sbjct:    1 FPLLMQAWKLGPALACGNTVVMKTAEQTPLTALYVAALAKEAGFPPGVINIISGYGPTAGAAISEHMDVDKVAFTGSTETAHIVMEAAAKSNLKRVSLELGGKSPMIVLADSDLDFAVDTCHHGLFFNMGQCCCAGSRIYVQEGVYDEFVKKSVERAKKRTVGDPFTEGIEQGPQIDTEQF 181          
The following BLAST results are available for this feature:
BLAST of BQ623312 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ALDH_EMENI5.652e-6658.38Aldehyde dehydrogenase OS=Emericella nidulans GN=a... [more]
ALDH1_MACPR6.249e-6557.28Aldehyde dehydrogenase, cytosolic 1 OS=Macroscelid... [more]
ALDH_CLAHE1.818e-6458.25Aldehyde dehydrogenase OS=Cladosporium herbarum GN... [more]
AL1A3_MOUSE2.374e-6457.00Aldehyde dehydrogenase family 1 member A3 OS=Mus m... [more]
AL1A3_HUMAN3.101e-6457.00Aldehyde dehydrogenase family 1 member A3 OS=Homo ... [more]
ALDH1_ELEED4.050e-6456.80Aldehyde dehydrogenase, cytosolic 1 OS=Elephantulu... [more]
AL1A3_RAT4.050e-6456.52Aldehyde dehydrogenase family 1 member A3 OS=Rattu... [more]
ALDHY_YEAST5.849e-6364.41Aldehyde dehydrogenase 2, mitochondrial OS=Sacchar... [more]
ALDH_ASPNG2.903e-6259.43Aldehyde dehydrogenase OS=Aspergillus niger GN=ald... [more]
ALDH9_POLMI8.445e-6262.98Aldehyde dehydrogenase 9 (Fragment) OS=Polyandroca... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00403 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00403 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623312 ID=BQ623312; Name=BQ623312; organism=Citrus sinensis; type=EST; length=627bp
TGTCCCTGGTGATGGAAATTACCATATTCAAACTTTACATGAACCAATTG
GCGTTGCTGGCCAGATAGTTCCCTGGAACTTTCCTGTTCTCTTGTTTACT
TGGAAAGTAGCGCCTGCACTAGCTTGTGGTAATACTATTGTTCTAAAGTC
TGCTGAGCAAACGCCTTTGACTGCTCTGTATTTGGCAAAGCTATTCCATG
AGGCTGGTCTTCCCCCCGGTGTTTTGAATGTAGTCTCTGGTTATGGTCCA
ACAGCTGGTGCAGCTCTTGCCAGCCATATGGATGTGGACAAGCTGTCTTT
TACAGGACACTGTGATACTGGTAAGATTGTTCAGGAATTGGCTGCAAAAA
GCAACCTTAAGCCAGTAACCTTAGAACTTGGAGGGAAATCACCATTTATA
ATATTCGATGATGCTGATGTTGACCAGGCTGTGGAACTTGCACACTTTGC
TTTGTTCTATAATCAGGGACAATGTTGCTGTGCTGGATCTCGTACTTATG
TACATGAGCGTGTATATGACGAGTTTGTAGAAAAAGCAAAGGCACGTGCT
ATGAGGCGTATTGGTTGGCGATCCCTTCAAGAATGGGGGTGAACAAGTCC
TCAAATTGATCCAGAGCAATTTCAAAA
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