BQ623312

Overview
NameBQ623312
Unique NameBQ623312
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length627
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7410 contig Csv1_Contig7410:800..1425. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623312 vs. ExPASy Swiss-Prot
Match: BETB_BURCC (Betaine aldehyde dehydrogenase OS=Burkholderia cenocepacia (strain MC0-3) GN=betB PE=3 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 1.710e-46
Identity = 95/189 (50.26%), Postives = 124/189 (65.61%), Query Frame = 2
Query:    2 VPGDGNYHIQTLHEPIGVAGQIVPWNFPVLLFTWKVAPALACGNTIVLKSAEQTPLTALYLAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMR-RIG 565
            VP      + T  EP+GV   I  WN+P+ +  WK APALA GN +V K +E TPLTAL LA+++ EAG+P GV NVV G G + GA L  H D+ K+SFTG  +TGK V  LA  S+LK VT+ELGGKSP I+FDDAD+D+A ++A  A F++ GQ C  G+R +VH  + D F +K   R  R R+G
Sbjct:  128 VPLRAESFVYTRREPLGVCAGIGAWNYPIQIACWKTAPALAAGNAMVFKPSEVTPLTALKLAEIYTEAGVPAGVFNVVQGDG-SVGALLTGHPDIAKVSFTGGVETGKKVMSLAGASSLKEVTMELGGKSPLIVFDDADLDRAADIAVTANFFSSGQVCTNGTRVFVHRSIKDAFTQKVLERVKRIRVG 315          
BLAST of BQ623312 vs. ExPASy Swiss-Prot
Match: BETB_BURCA (Betaine aldehyde dehydrogenase OS=Burkholderia cenocepacia (strain AU 1054) GN=betB PE=3 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 1.710e-46
Identity = 95/189 (50.26%), Postives = 124/189 (65.61%), Query Frame = 2
Query:    2 VPGDGNYHIQTLHEPIGVAGQIVPWNFPVLLFTWKVAPALACGNTIVLKSAEQTPLTALYLAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMR-RIG 565
            VP      + T  EP+GV   I  WN+P+ +  WK APALA GN +V K +E TPLTAL LA+++ EAG+P GV NVV G G + GA L  H D+ K+SFTG  +TGK V  LA  S+LK VT+ELGGKSP I+FDDAD+D+A ++A  A F++ GQ C  G+R +VH  + D F +K   R  R R+G
Sbjct:  128 VPLRAESFVYTRREPLGVCAGIGAWNYPIQIACWKTAPALAAGNAMVFKPSEVTPLTALKLAEIYTEAGVPAGVFNVVQGDG-SVGALLTGHPDIAKVSFTGGVETGKKVMSLAGASSLKEVTMELGGKSPLIVFDDADLDRAADIAVTANFFSSGQVCTNGTRVFVHRSIKDAFTQKVLERVKRIRVG 315          
BLAST of BQ623312 vs. ExPASy Swiss-Prot
Match: BETB_BURCJ (Betaine aldehyde dehydrogenase OS=Burkholderia cepacia (strain J2315 / LMG 16656) GN=betB PE=3 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 2.916e-46
Identity = 95/189 (50.26%), Postives = 124/189 (65.61%), Query Frame = 2
Query:    2 VPGDGNYHIQTLHEPIGVAGQIVPWNFPVLLFTWKVAPALACGNTIVLKSAEQTPLTALYLAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMR-RIG 565
            VP      + T  EP+GV   I  WN+P+ +  WK APALA GN +V K +E TPLTAL LA+++ EAG+P GV NVV G G + GA L  H D+ K+SFTG  +TGK V  LA  S+LK VT+ELGGKSP I+FDDAD+D+A ++A  A F++ GQ C  G+R ++H  V D F +K   R  R R+G
Sbjct:  128 VPLRAESFVYTRREPLGVCAGIGAWNYPIQIACWKTAPALAAGNAMVFKPSEVTPLTALKLAEIYTEAGVPAGVFNVVQGDG-SVGALLTGHPDIAKVSFTGGVETGKKVMSLAGASSLKEVTMELGGKSPLIVFDDADLDRAADIAVTANFFSSGQVCTNGTRVFMHRSVKDAFTQKVLERVKRIRVG 315          
BLAST of BQ623312 vs. ExPASy Swiss-Prot
Match: BETB_BURS3 (Betaine aldehyde dehydrogenase OS=Burkholderia sp. (strain 383) GN=betB PE=3 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 3.809e-46
Identity = 94/189 (49.74%), Postives = 124/189 (65.61%), Query Frame = 2
Query:    2 VPGDGNYHIQTLHEPIGVAGQIVPWNFPVLLFTWKVAPALACGNTIVLKSAEQTPLTALYLAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMR-RIG 565
            VP      + T  EP+GV   I  WN+P+ +  WK APALA GN +V K +E TPLTAL LA+++ EAG+P GV NVV G G + GA L  H D+ K+SFTG  +TGK V  LA  S+LK VT+ELGGKSP I+FDDAD+D+A ++A  A F++ GQ C  G+R +VH  + D F ++   R  R R+G
Sbjct:  128 VPLRAESFVYTRREPLGVCAGIGAWNYPIQIACWKTAPALAAGNAMVFKPSEVTPLTALKLAEIYTEAGVPAGVFNVVQGDG-SVGALLTGHPDIAKVSFTGGVETGKKVMSLAGASSLKEVTMELGGKSPLIVFDDADLDRAADIAVTANFFSSGQVCTNGTRVFVHRSIKDAFTQRVLERVKRIRVG 315          
BLAST of BQ623312 vs. ExPASy Swiss-Prot
Match: BETB_BURM1 (Betaine aldehyde dehydrogenase OS=Burkholderia multivorans (strain ATCC 17616 / 249) GN=betB PE=3 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 3.809e-46
Identity = 94/189 (49.74%), Postives = 125/189 (66.14%), Query Frame = 2
Query:    2 VPGDGNYHIQTLHEPIGVAGQIVPWNFPVLLFTWKVAPALACGNTIVLKSAEQTPLTALYLAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMR-RIG 565
            VP   +  + T  EP+GV   I  WN+P+ +  WK APALA GN +V K +E TPL+AL LA+++ EAG+P GV NVV G G + GA L  H D+ K+SFTG  +TGK V  LA  S+LK VT+ELGGKSP I+FDDAD+D+A ++A  A F++ GQ C  G+R +VH  + D F +K   R  R R+G
Sbjct:  128 VPLRADSFVYTRREPLGVCAGIGAWNYPIQIACWKTAPALAAGNAMVFKPSEVTPLSALKLAEIYTEAGVPAGVFNVVQGDG-SVGALLTGHPDIAKVSFTGGVETGKKVMSLAGASSLKEVTMELGGKSPLIVFDDADLDRAADIAVTANFFSSGQVCTNGTRVFVHRSIKDAFTQKVLERVKRIRVG 315          
BLAST of BQ623312 vs. ExPASy Swiss-Prot
Match: BADH_SPIOL (Betaine aldehyde dehydrogenase, chloroplastic OS=Spinacia oleracea PE=1 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 3.809e-46
Identity = 90/167 (53.89%), Postives = 116/167 (69.46%), Query Frame = 2
Query:   35 LHEPIGVAGQIVPWNFPVLLFTWKVAPALACGNTIVLKSAEQTPLTALYLAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 535
            L +P+GV G I PWN+P+L+ TWK+APALA G T VLK +E   +T L   ++ +E GLPPGVLN+++G GP AGA L SH DVDK++FTG   TG  V   AA+  +KPVTLELGGKSP ++F+D D+D+ VE   F  F+  GQ C A SR  VHE +  EFV+K
Sbjct:  145 LRQPLGVVGLISPWNYPLLMATWKIAPALAAGCTAVLKPSELASVTCLEFGEVCNEVGLPPGVLNILTGLGPDAGAPLVSHPDVDKIAFTGSSATGSKVMASAAQL-VKPVTLELGGKSPIVVFEDVDIDKVVEWTIFGCFWTNGQICSATSRLLVHESIAAEFVDK 310          
BLAST of BQ623312 vs. ExPASy Swiss-Prot
Match: BADH1_ARATH (Betaine aldehyde dehydrogenase 1, chloroplastic OS=Arabidopsis thaliana GN=ALDH10A8 PE=2 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 6.496e-46
Identity = 91/167 (54.49%), Postives = 116/167 (69.46%), Query Frame = 2
Query:   35 LHEPIGVAGQIVPWNFPVLLFTWKVAPALACGNTIVLKSAEQTPLTALYLAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 535
            L +P+GV G I PWN+P+L+  WKVAP+LA G T +LK +E   +T L LA +  E GLPPGVLNV++G+G  AGA LASH  VDK++FTG   TG  V   AA+  +KPV++ELGGKSP I+FDD D+D+A E A F  F+  GQ C A SR  VHE +  EF+EK
Sbjct:  148 LKQPLGVVGLITPWNYPLLMAVWKVAPSLAAGCTAILKPSELASVTCLELADICREVGLPPGVLNVLTGFGSEAGAPLASHPGVDKIAFTGSFATGSKVMTAAAQL-VKPVSMELGGKSPLIVFDDVDLDKAAEWALFGCFWTNGQICSATSRLLVHESIASEFIEK 313          
BLAST of BQ623312 vs. ExPASy Swiss-Prot
Match: ALDH6_YEAST (Magnesium-activated aldehyde dehydrogenase, cytosolic OS=Saccharomyces cerevisiae GN=ALD6 PE=1 SV=4)

HSP 1 Score: 183.726 bits (465), Expect = 6.496e-46
Identity = 91/179 (50.84%), Postives = 120/179 (67.04%), Query Frame = 2
Query:    8 GDGNYHIQTLHEPIGVAGQIVPWNFPVLLFTWKVAPALACGNTIVLKSAEQTPLTALYLAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKA 544
            GDG  +  TL EPIGV GQI+PWNFP+++  WK+APALA GN  +LK A  TPL ALY A L  + G+P GV+N+V G G T GAAL +   + KL+FTG  + GK V   +++SNLK +TLELGGKS  ++FDDA++ + +      +F N GQ C +GSR YV E +YDE +   KA
Sbjct:  151 GDGYMNFTTL-EPIGVCGQIIPWNFPIMMLAWKIAPALAMGNVCILKPAAVTPLNALYFASLCKKVGIPAGVVNIVPGPGRTVGAALTNDPRIRKLAFTGSTEVGKSVAVDSSESNLKKITLELGGKSAHLVFDDANIKKTLPNLVNGIFKNAGQICSSGSRIYVQEGIYDELLAAFKA 328          
BLAST of BQ623312 vs. ExPASy Swiss-Prot
Match: BETB_BURCM (Betaine aldehyde dehydrogenase OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=betB PE=3 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 8.485e-46
Identity = 94/189 (49.74%), Postives = 124/189 (65.61%), Query Frame = 2
Query:    2 VPGDGNYHIQTLHEPIGVAGQIVPWNFPVLLFTWKVAPALACGNTIVLKSAEQTPLTALYLAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMR-RIG 565
            VP      + T  EP+GV   I  WN+P+ +  WK APALA GN +V K +E TPLTAL LA+++ EAG+P GV NVV G G + GA L  H D+ K+SFTG  +TGK V  LA  S+LK VT+ELGGKSP I+F+DAD+D+A ++A  A F++ GQ C  G+R +VH  V D F ++   R  R R+G
Sbjct:  128 VPLRAESFVYTRREPLGVCAGIGAWNYPIQIACWKTAPALAAGNAMVFKPSEVTPLTALKLAEIYTEAGVPAGVFNVVQGDG-SVGALLTGHPDIAKVSFTGGVETGKKVMSLAGASSLKEVTMELGGKSPLIVFEDADLDRAADIAVTANFFSSGQVCTNGTRVFVHRSVKDAFTQRVLERVKRIRVG 315          
BLAST of BQ623312 vs. ExPASy Swiss-Prot
Match: BETB_BURA4 (Betaine aldehyde dehydrogenase OS=Burkholderia ambifaria (strain MC40-6) GN=betB PE=3 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 8.485e-46
Identity = 94/189 (49.74%), Postives = 124/189 (65.61%), Query Frame = 2
Query:    2 VPGDGNYHIQTLHEPIGVAGQIVPWNFPVLLFTWKVAPALACGNTIVLKSAEQTPLTALYLAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMR-RIG 565
            VP      + T  EP+GV   I  WN+P+ +  WK APALA GN +V K +E TPLTAL LA+++ EAG+P GV NVV G G + GA L  H D+ K+SFTG  +TGK V  LA  S+LK VT+ELGGKSP I+F+DAD+D+A ++A  A F++ GQ C  G+R +VH  V D F ++   R  R R+G
Sbjct:  128 VPLRAESFVYTRREPLGVCAGIGAWNYPIQIACWKTAPALAAGNAMVFKPSEVTPLTALKLAEIYTEAGVPAGVFNVVQGDG-SVGALLTGHPDIAKVSFTGGVETGKKVMSLAGASSLKEVTMELGGKSPLIVFEDADLDRAADIAVTANFFSSGQVCTNGTRVFVHRSVKDAFTQRVLERVKRIRVG 315          
The following BLAST results are available for this feature:
BLAST of BQ623312 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
BETB_BURCC1.710e-4650.26Betaine aldehyde dehydrogenase OS=Burkholderia cen... [more]
BETB_BURCA1.710e-4650.26Betaine aldehyde dehydrogenase OS=Burkholderia cen... [more]
BETB_BURCJ2.916e-4650.26Betaine aldehyde dehydrogenase OS=Burkholderia cep... [more]
BETB_BURS33.809e-4649.74Betaine aldehyde dehydrogenase OS=Burkholderia sp.... [more]
BETB_BURM13.809e-4649.74Betaine aldehyde dehydrogenase OS=Burkholderia mul... [more]
BADH_SPIOL3.809e-4653.89Betaine aldehyde dehydrogenase, chloroplastic OS=S... [more]
BADH1_ARATH6.496e-4654.49Betaine aldehyde dehydrogenase 1, chloroplastic OS... [more]
ALDH6_YEAST6.496e-4650.84Magnesium-activated aldehyde dehydrogenase, cytoso... [more]
BETB_BURCM8.485e-4649.74Betaine aldehyde dehydrogenase OS=Burkholderia amb... [more]
BETB_BURA48.485e-4649.74Betaine aldehyde dehydrogenase OS=Burkholderia amb... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00403 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00403 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623312 ID=BQ623312; Name=BQ623312; organism=Citrus sinensis; type=EST; length=627bp
TGTCCCTGGTGATGGAAATTACCATATTCAAACTTTACATGAACCAATTG
GCGTTGCTGGCCAGATAGTTCCCTGGAACTTTCCTGTTCTCTTGTTTACT
TGGAAAGTAGCGCCTGCACTAGCTTGTGGTAATACTATTGTTCTAAAGTC
TGCTGAGCAAACGCCTTTGACTGCTCTGTATTTGGCAAAGCTATTCCATG
AGGCTGGTCTTCCCCCCGGTGTTTTGAATGTAGTCTCTGGTTATGGTCCA
ACAGCTGGTGCAGCTCTTGCCAGCCATATGGATGTGGACAAGCTGTCTTT
TACAGGACACTGTGATACTGGTAAGATTGTTCAGGAATTGGCTGCAAAAA
GCAACCTTAAGCCAGTAACCTTAGAACTTGGAGGGAAATCACCATTTATA
ATATTCGATGATGCTGATGTTGACCAGGCTGTGGAACTTGCACACTTTGC
TTTGTTCTATAATCAGGGACAATGTTGCTGTGCTGGATCTCGTACTTATG
TACATGAGCGTGTATATGACGAGTTTGTAGAAAAAGCAAAGGCACGTGCT
ATGAGGCGTATTGGTTGGCGATCCCTTCAAGAATGGGGGTGAACAAGTCC
TCAAATTGATCCAGAGCAATTTCAAAA
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