BQ623312

Overview
NameBQ623312
Unique NameBQ623312
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length627
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7410 contig Csv1_Contig7410:800..1425. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623312 vs. ExPASy Swiss-Prot
Match: BETB_VIBPA (Betaine aldehyde dehydrogenase OS=Vibrio parahaemolyticus GN=betB PE=3 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.108e-45
Identity = 94/193 (48.70%), Postives = 124/193 (64.25%), Query Frame = 2
Query:    5 PGDGNYHIQTLHEPIGVAGQIVPWNFPVLLFTWKVAPALACGNTIVLKSAEQTPLTALYLAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIGWRSLQE 583
            P + N    T  EP+G+   I  WN+P+ +  WK APALA GN ++ K +E+TPLTAL LA+++ EAGLP GV NVV G     G  L +H D+ K+SFTG   TGK+V   +AK+ LK VT+ELGGKSP I+FDDA +D AV  A  A FY QG+ C  G+R +VHE +YD+FV + K R  + +    L E
Sbjct:  126 PLNENQFFYTRREPLGICAGIGAWNYPIQIAMWKSAPALAAGNAMIFKPSEETPLTALKLAEIYSEAGLPDGVFNVVQG-DYRVGQMLTAHPDIAKVSFTGESGTGKVVMGDSAKT-LKQVTMELGGKSPLIVFDDAKLDDAVSAAMVANFYTQGEVCTNGTRVFVHESIYDDFVAQLKTRTEKLVVGDPLDE 316          
BLAST of BQ623312 vs. ExPASy Swiss-Prot
Match: BADH_AMAHP (Betaine aldehyde dehydrogenase, chloroplastic OS=Amaranthus hypochondriacus GN=BADH4 PE=3 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 1.447e-45
Identity = 91/172 (52.91%), Postives = 117/172 (68.02%), Query Frame = 2
Query:   20 YHIQTLHEPIGVAGQIVPWNFPVLLFTWKVAPALACGNTIVLKSAEQTPLTALYLAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 535
            +    L +PIGV G I PWN+P+L+ TWKVAPALA G + VLK +E   +T L LA++  E GLPPGVLN+++G GP AG  LA H DVDK++FTG   TG  V   AA+  +KPVTLELGGKSP +IF+D D+D+A E   F  F+  GQ C A SR  VHE +  EF+++
Sbjct:  143 FKCHVLKQPIGVVGLISPWNYPLLMATWKVAPALAAGCSAVLKPSELASVTCLELAEVCREVGLPPGVLNILTGLGPEAGGPLACHPDVDKVAFTGSTATGSKVMSSAAQL-VKPVTLELGGKSPIVIFEDVDLDKAAEWTAFGCFWTNGQICSATSRLLVHESIAAEFLDR 313          
BLAST of BQ623312 vs. ExPASy Swiss-Prot
Match: BETB_BURVG (Betaine aldehyde dehydrogenase OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=betB PE=3 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 1.890e-45
Identity = 94/189 (49.74%), Postives = 122/189 (64.55%), Query Frame = 2
Query:    2 VPGDGNYHIQTLHEPIGVAGQIVPWNFPVLLFTWKVAPALACGNTIVLKSAEQTPLTALYLAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMR-RIG 565
            VP      + T  EP+GV   I  WN+P+ +  WK APALA GN +V K +E TPLTAL LA+++ EAG+P GV NVV G G + GA L  H D+ K+SFTG  +TGK V  LA  S+LK VT+ELGGKSP I+FDDAD+D+A ++A  A F++ GQ C  G+R +V   + D F  K   R  R R+G
Sbjct:  128 VPLRAESFVYTRREPLGVCAGIGAWNYPIQIACWKTAPALAAGNAMVFKPSEVTPLTALKLAEIYTEAGVPAGVFNVVQGDG-SVGALLTGHPDIAKVSFTGGVETGKKVMSLAGASSLKEVTMELGGKSPLIVFDDADLDRAADIAVIANFFSSGQVCTNGTRVFVQRSIKDAFTAKVLERVKRIRVG 315          
BLAST of BQ623312 vs. ExPASy Swiss-Prot
Match: BETB_BACSU (Betaine aldehyde dehydrogenase OS=Bacillus subtilis GN=gbsA PE=1 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 1.890e-45
Identity = 91/174 (52.30%), Postives = 122/174 (70.11%), Query Frame = 2
Query:   35 LHEPIGVAGQIVPWNFPVLLFTWKVAPALACGNTIVLKSAEQTPLTALYLAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMR 556
            + EPIGV GQI PWN+P+L  +WK+APALA GNTIV+K +E TPLT + + KL  EAG+P GV N+V G G T G  LA + DVD +SFTG  +TGK +   AA  N+K + LELGGK+P I+F DAD++ AV+ A  A+F++ GQ C AGSR  V + ++D+F+ +   RA R
Sbjct:  137 IREPIGVCGQITPWNYPLLQASWKIAPALAAGNTIVMKPSEITPLTTIKVFKLMEEAGVPKGVANLVLGPGATVGDELAVNKDVDLISFTGGIETGKKIMR-AASGNVKKIALELGGKNPNIVFKDADLEVAVDQALNAVFFHAGQVCSAGSRLLVEDAIHDQFLAELVKRAKR 309          
BLAST of BQ623312 vs. ExPASy Swiss-Prot
Match: BETB_BURPS (Betaine aldehyde dehydrogenase OS=Burkholderia pseudomallei GN=betB PE=3 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 3.224e-45
Identity = 92/181 (50.83%), Postives = 125/181 (69.06%), Query Frame = 2
Query:   26 IQTLHEPIGVAGQIVPWNFPVLLFTWKVAPALACGNTIVLKSAEQTPLTALYLAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMR-RIG 565
            + T  EP+GV   I  WN+P+ +  WK APALA GN ++ K +E TPL+AL LA+++ EAG+P GV NVV G G + GA L++H  + K+SFTG  +TGK V  LA  S+LK VT+ELGGKSP I+FDDAD+D+A ++A  A F++ GQ C  G+R +V + V D FVE+  AR  R R+G
Sbjct:  136 VYTRREPLGVCAGIGAWNYPIQIACWKSAPALAAGNAMIFKPSEVTPLSALKLAEIYTEAGVPAGVFNVVQGDG-SVGALLSAHPGIAKVSFTGGVETGKKVMSLAGASSLKEVTMELGGKSPLIVFDDADLDRAADIAVTANFFSAGQVCTNGTRVFVQQAVKDAFVERVLARVARIRVG 315          
BLAST of BQ623312 vs. ExPASy Swiss-Prot
Match: BETB_BURP1 (Betaine aldehyde dehydrogenase OS=Burkholderia pseudomallei (strain 1710b) GN=betB PE=3 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 3.224e-45
Identity = 92/181 (50.83%), Postives = 125/181 (69.06%), Query Frame = 2
Query:   26 IQTLHEPIGVAGQIVPWNFPVLLFTWKVAPALACGNTIVLKSAEQTPLTALYLAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMR-RIG 565
            + T  EP+GV   I  WN+P+ +  WK APALA GN ++ K +E TPL+AL LA+++ EAG+P GV NVV G G + GA L++H  + K+SFTG  +TGK V  LA  S+LK VT+ELGGKSP I+FDDAD+D+A ++A  A F++ GQ C  G+R +V + V D FVE+  AR  R R+G
Sbjct:  136 VYTRREPLGVCAGIGAWNYPIQIACWKSAPALAAGNAMIFKPSEVTPLSALKLAEIYTEAGVPAGVFNVVQGDG-SVGALLSAHPGIAKVSFTGGVETGKKVMSLAGASSLKEVTMELGGKSPLIVFDDADLDRAADIAVTANFFSAGQVCTNGTRVFVQQAVKDAFVERVLARVARIRVG 315          
BLAST of BQ623312 vs. ExPASy Swiss-Prot
Match: BETB_BURP0 (Betaine aldehyde dehydrogenase OS=Burkholderia pseudomallei (strain 1106a) GN=betB PE=3 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 3.224e-45
Identity = 92/181 (50.83%), Postives = 125/181 (69.06%), Query Frame = 2
Query:   26 IQTLHEPIGVAGQIVPWNFPVLLFTWKVAPALACGNTIVLKSAEQTPLTALYLAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMR-RIG 565
            + T  EP+GV   I  WN+P+ +  WK APALA GN ++ K +E TPL+AL LA+++ EAG+P GV NVV G G + GA L++H  + K+SFTG  +TGK V  LA  S+LK VT+ELGGKSP I+FDDAD+D+A ++A  A F++ GQ C  G+R +V + V D FVE+  AR  R R+G
Sbjct:  136 VYTRREPLGVCAGIGAWNYPIQIACWKSAPALAAGNAMIFKPSEVTPLSALKLAEIYTEAGVPAGVFNVVQGDG-SVGALLSAHPGIAKVSFTGGVETGKKVMSLAGASSLKEVTMELGGKSPLIVFDDADLDRAADIAVTANFFSAGQVCTNGTRVFVQQAVKDAFVERVLARVARIRVG 315          
BLAST of BQ623312 vs. ExPASy Swiss-Prot
Match: ALDA_STAAW (Putative aldehyde dehydrogenase aldA OS=Staphylococcus aureus (strain MW2) GN=aldA PE=3 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 3.224e-45
Identity = 91/166 (54.82%), Postives = 118/166 (71.08%), Query Frame = 2
Query:   38 HEPIGVAGQIVPWNFPVLLFTWKVAPALACGNTIVLKSAEQTPLTALYLAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 535
            HEPIGV G +V WNFP+LL  WK+APA+A GNTIV++ +  TPL+ L +AK+F E  LP GV+N+++G G  +G A+ +H  VDKLSFTG  D G  V E AAK +L P TLELGGKS  II DDA++D AVE     + +NQG+ C AGSR  VHE++YD+ V +
Sbjct:  146 HEPIGVVGAVVAWNFPMLLAAWKIAPAIAAGNTIVIQPSSSTPLSLLEVAKIFQEV-LPKGVVNILTGKGSESGNAIFNHDGVDKLSFTGSTDVGYQVAEAAAK-HLVPATLELGGKSANIILDDANLDLAVEGIQLGILFNQGEVCSAGSRLLVHEKIYDQLVPR 309          
BLAST of BQ623312 vs. ExPASy Swiss-Prot
Match: ALDA_STAAS (Putative aldehyde dehydrogenase aldA OS=Staphylococcus aureus (strain MSSA476) GN=aldA PE=3 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 3.224e-45
Identity = 91/166 (54.82%), Postives = 118/166 (71.08%), Query Frame = 2
Query:   38 HEPIGVAGQIVPWNFPVLLFTWKVAPALACGNTIVLKSAEQTPLTALYLAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 535
            HEPIGV G +V WNFP+LL  WK+APA+A GNTIV++ +  TPL+ L +AK+F E  LP GV+N+++G G  +G A+ +H  VDKLSFTG  D G  V E AAK +L P TLELGGKS  II DDA++D AVE     + +NQG+ C AGSR  VHE++YD+ V +
Sbjct:  146 HEPIGVVGAVVAWNFPMLLAAWKIAPAIAAGNTIVIQPSSSTPLSLLEVAKIFQEV-LPKGVVNILTGKGSESGNAIFNHDGVDKLSFTGSTDVGYQVAEAAAK-HLVPATLELGGKSANIILDDANLDLAVEGIQLGILFNQGEVCSAGSRLLVHEKIYDQLVPR 309          
BLAST of BQ623312 vs. ExPASy Swiss-Prot
Match: ALDA_STAAN (Putative aldehyde dehydrogenase aldA OS=Staphylococcus aureus (strain N315) GN=aldA PE=1 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 3.224e-45
Identity = 91/166 (54.82%), Postives = 118/166 (71.08%), Query Frame = 2
Query:   38 HEPIGVAGQIVPWNFPVLLFTWKVAPALACGNTIVLKSAEQTPLTALYLAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEK 535
            HEPIGV G +V WNFP+LL  WK+APA+A GNTIV++ +  TPL+ L +AK+F E  LP GV+N+++G G  +G A+ +H  VDKLSFTG  D G  V E AAK +L P TLELGGKS  II DDA++D AVE     + +NQG+ C AGSR  VHE++YD+ V +
Sbjct:  146 HEPIGVVGAVVAWNFPMLLAAWKIAPAIAAGNTIVIQPSSSTPLSLLEVAKIFQEV-LPKGVVNILTGKGSESGNAIFNHDGVDKLSFTGSTDVGYQVAEAAAK-HLVPATLELGGKSANIILDDANLDLAVEGIQLGILFNQGEVCSAGSRLLVHEKIYDQLVPR 309          
The following BLAST results are available for this feature:
BLAST of BQ623312 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
BETB_VIBPA1.108e-4548.70Betaine aldehyde dehydrogenase OS=Vibrio parahaemo... [more]
BADH_AMAHP1.447e-4552.91Betaine aldehyde dehydrogenase, chloroplastic OS=A... [more]
BETB_BURVG1.890e-4549.74Betaine aldehyde dehydrogenase OS=Burkholderia vie... [more]
BETB_BACSU1.890e-4552.30Betaine aldehyde dehydrogenase OS=Bacillus subtili... [more]
BETB_BURPS3.224e-4550.83Betaine aldehyde dehydrogenase OS=Burkholderia pse... [more]
BETB_BURP13.224e-4550.83Betaine aldehyde dehydrogenase OS=Burkholderia pse... [more]
BETB_BURP03.224e-4550.83Betaine aldehyde dehydrogenase OS=Burkholderia pse... [more]
ALDA_STAAW3.224e-4554.82Putative aldehyde dehydrogenase aldA OS=Staphyloco... [more]
ALDA_STAAS3.224e-4554.82Putative aldehyde dehydrogenase aldA OS=Staphyloco... [more]
ALDA_STAAN3.224e-4554.82Putative aldehyde dehydrogenase aldA OS=Staphyloco... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00403 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00403 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623312 ID=BQ623312; Name=BQ623312; organism=Citrus sinensis; type=EST; length=627bp
TGTCCCTGGTGATGGAAATTACCATATTCAAACTTTACATGAACCAATTG
GCGTTGCTGGCCAGATAGTTCCCTGGAACTTTCCTGTTCTCTTGTTTACT
TGGAAAGTAGCGCCTGCACTAGCTTGTGGTAATACTATTGTTCTAAAGTC
TGCTGAGCAAACGCCTTTGACTGCTCTGTATTTGGCAAAGCTATTCCATG
AGGCTGGTCTTCCCCCCGGTGTTTTGAATGTAGTCTCTGGTTATGGTCCA
ACAGCTGGTGCAGCTCTTGCCAGCCATATGGATGTGGACAAGCTGTCTTT
TACAGGACACTGTGATACTGGTAAGATTGTTCAGGAATTGGCTGCAAAAA
GCAACCTTAAGCCAGTAACCTTAGAACTTGGAGGGAAATCACCATTTATA
ATATTCGATGATGCTGATGTTGACCAGGCTGTGGAACTTGCACACTTTGC
TTTGTTCTATAATCAGGGACAATGTTGCTGTGCTGGATCTCGTACTTATG
TACATGAGCGTGTATATGACGAGTTTGTAGAAAAAGCAAAGGCACGTGCT
ATGAGGCGTATTGGTTGGCGATCCCTTCAAGAATGGGGGTGAACAAGTCC
TCAAATTGATCCAGAGCAATTTCAAAA
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