BQ623318
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ623318 vs. ExPASy Swiss-Prot
Match: CB24_SOLLC (Chlorophyll a-b binding protein 4, chloroplastic OS=Solanum lycopersicum GN=CAB4 PE=2 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 4.272e-22 Identity = 47/52 (90.38%), Postives = 50/52 (96.15%), Query Frame = 1 Query: 1 IKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 156 IKNGRLAMFSMFGFFVQAIVTGKGP+ENL+DH+ DPV NNAWAYATNFVPGK Sbjct: 214 IKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHINDPVANNAWAYATNFVPGK 265
BLAST of BQ623318 vs. ExPASy Swiss-Prot
Match: CB23_ORYSJ (Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa subsp. japonica GN=RCABP89 PE=2 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 4.272e-22 Identity = 47/52 (90.38%), Postives = 50/52 (96.15%), Query Frame = 1 Query: 1 IKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 156 +KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPGK Sbjct: 212 LKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHVADPVANNAWAYATNFVPGK 263
BLAST of BQ623318 vs. ExPASy Swiss-Prot
Match: CB23_ORYSI (Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa subsp. indica GN=OsI_012078 PE=2 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 4.272e-22 Identity = 47/52 (90.38%), Postives = 50/52 (96.15%), Query Frame = 1 Query: 1 IKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 156 +KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPGK Sbjct: 212 LKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHVADPVANNAWAYATNFVPGK 263
BLAST of BQ623318 vs. ExPASy Swiss-Prot
Match: CB26_PETSP (Chlorophyll a-b binding protein 37, chloroplastic OS=Petunia sp. GN=CAB37 PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 7.287e-22 Identity = 47/52 (90.38%), Postives = 50/52 (96.15%), Query Frame = 1 Query: 1 IKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 156 IKNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWA+ATNFVPGK Sbjct: 214 IKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHVADPVANNAWAFATNFVPGK 265
BLAST of BQ623318 vs. ExPASy Swiss-Prot
Match: CB23_POLMU (Chlorophyll a-b binding protein type 1 member F3, chloroplastic OS=Polystichum munitum GN=CABF3 PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 9.517e-22 Identity = 46/52 (88.46%), Postives = 49/52 (94.23%), Query Frame = 1 Query: 1 IKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 156 +KNGRLAMFSMFGFFVQAIVTGKGP+ENL+DHLADP NNAWAYATNF PGK Sbjct: 214 LKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPAVNNAWAYATNFTPGK 265
BLAST of BQ623318 vs. ExPASy Swiss-Prot
Match: CB215_PEA (Chlorophyll a-b binding protein 215, chloroplastic OS=Pisum sativum GN=CAB215 PE=1 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 8.056e-21 Identity = 44/52 (84.62%), Postives = 50/52 (96.15%), Query Frame = 1 Query: 1 IKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 156 +KNGRLAMFSMFGFFVQAIVTGKGP++NL DH+ADPV NNAWA+ATNFVPG+ Sbjct: 214 LKNGRLAMFSMFGFFVQAIVTGKGPIQNLYDHVADPVANNAWAFATNFVPGQ 265
BLAST of BQ623318 vs. ExPASy Swiss-Prot
Match: CB23_SOLLC (Chlorophyll a-b binding protein 13, chloroplastic OS=Solanum lycopersicum GN=CAB13 PE=1 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 5.222e-20 Identity = 45/51 (88.24%), Postives = 46/51 (90.20%), Query Frame = 1 Query: 1 IKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 153 IKNGRLAMFSMFGFFVQAIVTGKGPLENL DHL +PV NNAW YAT FVPG Sbjct: 214 IKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFVPG 264
BLAST of BQ623318 vs. ExPASy Swiss-Prot
Match: CB23_HORVU (Chlorophyll a-b binding protein of LHCII type III, chloroplastic OS=Hordeum vulgare GN=LHBC PE=2 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 1.519e-19 Identity = 44/51 (86.27%), Postives = 45/51 (88.24%), Query Frame = 1 Query: 1 IKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 153 IKNGRLAMFSMFGFFVQAIVTGKGPLENL DHL DPV NNAW +AT F PG Sbjct: 217 IKNGRLAMFSMFGFFVQAIVTGKGPLENLFDHLDDPVANNAWVFATKFAPG 267
BLAST of BQ623318 vs. ExPASy Swiss-Prot
Match: CB2_PHYPA (Chlorophyll a-b binding protein, chloroplastic OS=Physcomitrella patens PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 2.592e-19 Identity = 45/51 (88.24%), Postives = 45/51 (88.24%), Query Frame = 1 Query: 1 IKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 153 IKNGRLAMFSMFGFFVQAIVTGKGPLENL DHLADPV NNAWAYA PG Sbjct: 217 IKNGRLAMFSMFGFFVQAIVTGKGPLENLNDHLADPVANNAWAYAPTSPPG 267
BLAST of BQ623318 vs. ExPASy Swiss-Prot
Match: CB2_CHLMO (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Chlamydomonas moewusii PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 4.138e-17 Identity = 41/50 (82.00%), Postives = 44/50 (88.00%), Query Frame = 1 Query: 1 IKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 150 IKNGRLAMFS FGFFVQAIVTGKGP++NLADHLADP NNA+A AT F P Sbjct: 205 IKNGRLAMFSCFGFFVQAIVTGKGPIQNLADHLADPGTNNAFAAATKFTP 254 The following BLAST results are available for this feature:
BLAST of BQ623318 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 66
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623318 ID=BQ623318; Name=BQ623318; organism=Citrus sinensis; type=EST; length=266bpback to top |