BQ623318
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of BQ623318 vs. ExPASy Swiss-Prot
Match: CB2_DUNSA (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Dunaliella salina PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 9.218e-17 Identity = 39/50 (78.00%), Postives = 43/50 (86.00%), Query Frame = 1 Query: 1 IKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 150 IKNGRLAMF+ GFFVQAIVTGKGP+ENL DHLA+P NNA+AYAT F P Sbjct: 223 IKNGRLAMFACLGFFVQAIVTGKGPIENLTDHLANPAENNAFAYATKFTP 272
BLAST of BQ623318 vs. ExPASy Swiss-Prot
Match: CB2_CHLRE (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Chlamydomonas reinhardtii GN=cabII-1 PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 2.682e-16 Identity = 39/50 (78.00%), Postives = 44/50 (88.00%), Query Frame = 1 Query: 1 IKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 150 IKNGRLA FSMFGFFVQAIVTGKGP++NL DHLA+P NNA+A+AT F P Sbjct: 202 IKNGRLASFSMFGFFVQAIVTGKGPVQNLDDHLANPTVNNAFAFATKFTP 251
BLAST of BQ623318 vs. ExPASy Swiss-Prot
Match: CB2_DUNTE (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Dunaliella tertiolecta PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 7.803e-16 Identity = 39/51 (76.47%), Postives = 42/51 (82.35%), Query Frame = 1 Query: 1 IKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 153 IKNGRLAMFS GFFVQAIVTGKGP++NL DHLADP N A+A AT F PG Sbjct: 202 IKNGRLAMFSCLGFFVQAIVTGKGPVQNLTDHLADPTVNKAFASATKFTPG 252
BLAST of BQ623318 vs. ExPASy Swiss-Prot
Match: CB2_MALDO (Chlorophyll a-b binding protein AB10, chloroplastic OS=Malus domestica PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.472e-14 Identity = 39/51 (76.47%), Postives = 42/51 (82.35%), Query Frame = 1 Query: 1 IKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 153 +KNGRLAMFSMFGFFVQAIV+ K LENLADHL VNNNA + TNFVPG Sbjct: 217 LKNGRLAMFSMFGFFVQAIVSRKDRLENLADHLGWTVNNNALSNVTNFVPG 267
BLAST of BQ623318 vs. ExPASy Swiss-Prot
Match: CB26_ARATH (Chlorophyll a-b binding protein CP26, chloroplastic OS=Arabidopsis thaliana GN=LHCB5 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 1.523e-11 Identity = 30/40 (75.00%), Postives = 35/40 (87.50%), Query Frame = 1 Query: 1 IKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 120 IKNGRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN Sbjct: 226 IKNGRLAMFAMLGFFIQAYVTGEGPVENLAKHLSDPFGNN 265
BLAST of BQ623318 vs. ExPASy Swiss-Prot
Match: CB13_SOLLC (Chlorophyll a-b binding protein 8, chloroplastic OS=Solanum lycopersicum GN=CAB8 PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 2.598e-11 Identity = 29/40 (72.50%), Postives = 35/40 (87.50%), Query Frame = 1 Query: 1 IKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 120 IKNGRLAM ++ G+F+QA+VTG GP +NL DHLADPVNNN Sbjct: 226 IKNGRLAMLAILGYFIQALVTGVGPYQNLLDHLADPVNNN 265 The following BLAST results are available for this feature:
BLAST of BQ623318 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 66
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623318 ID=BQ623318; Name=BQ623318; organism=Citrus sinensis; type=EST; length=266bpback to top |