BQ623325

Overview
NameBQ623325
Unique NameBQ623325
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length512
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623325 vs. ExPASy Swiss-Prot
Match: TIP11_ORYSJ (Probable aquaporin TIP1-1 OS=Oryza sativa subsp. japonica GN=TIP1-1 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 6.735e-12
Identity = 40/107 (37.38%), Postives = 59/107 (55.14%), Query Frame = 2
Query:   92 GYSTGTGLGAEIIGTFVLVYTVFS-ATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVIYSKEKAWDDQWIFWVGPFIGAAIAAFYHQFI 409
            G S    L  EI+ TF LVYTV++ A DPK+ +    +  +AP+ IGF V    L      G  +NPA S G A++     +W+ QW++WVGP IG  +A   ++ +
Sbjct:  137 GVSVWEALVLEIVMTFGLVYTVYATAVDPKKGS----LGTIAPIAIGFIVGANILVGGAFDGASMNPAVSFGPALV---SWSWESQWVYWVGPLIGGGLAGVIYEVL 236          
BLAST of BQ623325 vs. ExPASy Swiss-Prot
Match: TIP51_ARATH (Probable aquaporin TIP5-1 OS=Arabidopsis thaliana GN=TIP5-1 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.149e-11
Identity = 41/106 (38.68%), Postives = 63/106 (59.43%), Query Frame = 2
Query:  107 TGLGAEIIG---TFVLVYTVFSATDPKRNARDSHVPV-LAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVIYSKEKAWDDQWIFWVGPFIGAAIAAFYHQFIL 412
            TG GA ++     FVLVYTVF+A+DP+R      +P+ + P+ IGF      LA  P +G  +NPA + G+A++Y   K   +Q ++WVGP +G A AA  +  ++
Sbjct:  142 TGFGASVLEGVLAFVLVYTVFTASDPRRG-----LPLAVGPIFIGFVAGANVLAAGPFSGGSMNPACAFGSAMVYGSFK---NQAVYWVGPLLGGATAALVYDNVV 239          
BLAST of BQ623325 vs. ExPASy Swiss-Prot
Match: TIP21_MAIZE (Aquaporin TIP2-1 OS=Zea mays GN=TIP2-1 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.500e-11
Identity = 40/104 (38.46%), Postives = 58/104 (55.77%), Query Frame = 2
Query:   92 GYSTGTGLGAEIIGTFVLVYTVFS-ATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVIYSKEKAWDDQWIFWVGPFIGAAIAAFYH 400
            G S   G+  E++ TF LVYTV++ A DPK+ +    +  +AP+ IGF V    LA  P +G  +NPARS G AV       +   W++WVGP +G  +A   +
Sbjct:  135 GISELEGVVFEVVITFALVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVAAGD---FAGNWVYWVGPLVGGGLAGLVY 231          
BLAST of BQ623325 vs. ExPASy Swiss-Prot
Match: AQPZ_PSEAE (Aquaporin Z OS=Pseudomonas aeruginosa GN=aqpZ PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 1.960e-11
Identity = 38/106 (35.85%), Postives = 58/106 (54.72%), Query Frame = 2
Query:   92 GYSTGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVIYSKEKAWDDQWIFWVGPFIGAAIAAFYHQFI 409
            GYS    L +E++ T + +  +  AT  KR  +       AP+ IG  + ++HL +IPVT T +NPARS  A  +Y  + A    W+FWV P +GA + A  ++ I
Sbjct:  126 GYSLQAALVSEVVLTGMFLLIILGATS-KRAPQG-----FAPIAIGLTLTLIHLISIPVTNTSVNPARST-AVALYVGDWAVSQLWLFWVAPILGAVLGALAYRLI 224          
BLAST of BQ623325 vs. ExPASy Swiss-Prot
Match: AQPZ_PHOLL (Aquaporin Z OS=Photorhabdus luminescens subsp. laumondii GN=aqpZ PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 1.960e-11
Identity = 36/106 (33.96%), Postives = 57/106 (53.77%), Query Frame = 2
Query:   92 GYSTGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVIYSKEKAWDDQWIFWVGPFIGAAIAAFYHQFI 409
            G+S  + + AEI+ T + +  +  ATD +        P  APL IG A+ +++L +IP+T T +NPARS  A  I+    A +  W FWV P IG  +    ++ +
Sbjct:  128 GFSLQSAIVAEIVLTAIFLIVIIGATDRRAP------PGFAPLAIGLALVLINLISIPITNTSVNPARST-AVAIFQNTWALEQLWFFWVMPIIGGIVGGGIYRLL 226          
BLAST of BQ623325 vs. ExPASy Swiss-Prot
Match: TIP11_MAIZE (Aquaporin TIP1-1 OS=Zea mays GN=TIP1-1 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 2.559e-11
Identity = 42/118 (35.59%), Postives = 62/118 (52.54%), Query Frame = 2
Query:   92 GYSTGTGLGAEIIGTFVLVYTVFS-ATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVIYSKEKAWDDQWIFWVGPFIGAAIAAFYHQFILRASASKALGS 442
            G S    L  EI+ TF LVYTV++ A DPK+ +    +  +AP+ IGF V    L      G  +NPA S G A++  +   W  QW++WVGP IG  +A   ++ +  +   + L S
Sbjct:  137 GVSVWEALVLEIVMTFGLVYTVYATAVDPKKGS----LGTIAPIAIGFIVGANILVGGAFDGASMNPAVSFGPALVSWE---WGYQWVYWVGPLIGGGLAGVIYELLFISHTHEQLPS 247          
BLAST of BQ623325 vs. ExPASy Swiss-Prot
Match: AQPZ_VIBPA (Aquaporin Z OS=Vibrio parahaemolyticus GN=aqpZ PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 2.559e-11
Identity = 38/106 (35.85%), Postives = 58/106 (54.72%), Query Frame = 2
Query:   95 YSTGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVIYSKEKAWDDQWIFWVGPFIGAAIAAFYHQFIL 412
            YS    L +EI+ T + +  +  ATD KR  +       AP+ IG  + ++HL +IPVT T +NPARS  A  +Y  + A    W+FWV P +G  + A  ++ +L
Sbjct:  128 YSMLAALVSEIVMTMMFLIVIMGATD-KRAPQG-----FAPIAIGLCLTLIHLISIPVTNTSVNPARST-AVAMYVGDWAVSQLWLFWVAPIVGGVLGAVIYKNLL 226          
BLAST of BQ623325 vs. ExPASy Swiss-Prot
Match: AQPZ_BRAJA (Aquaporin Z OS=Bradyrhizobium japonicum GN=aqpZ PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 2.559e-11
Identity = 35/96 (36.46%), Postives = 54/96 (56.25%), Query Frame = 2
Query:  122 EIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVIYSKEKAWDDQWIFWVGPFIGAAIAAFYHQFI 409
            E++ T + ++ +  AT  +  A        APL IG A+ M+HL +IPVT T +NPARS G A ++    A    W+FWV P IG A+    ++++
Sbjct:  138 EVVMTMMFLFIIMGATHGRAPAG------FAPLAIGLALVMIHLVSIPVTNTSVNPARSTGPA-LFVGGWAMAQLWLFWVAPLIGGALGGVIYRWL 226          
BLAST of BQ623325 vs. ExPASy Swiss-Prot
Match: TIP11_ARATH (Aquaporin TIP1-1 OS=Arabidopsis thaliana GN=TIP1-1 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 3.343e-11
Identity = 45/117 (38.46%), Postives = 62/117 (52.99%), Query Frame = 2
Query:   68 GGANELADGYSTGTG-LGA---EIIGTFVLVYTVFS-ATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVIYSKEKAWDDQWIFWVGPFIGAAIAAFYHQ 403
            GG    A G S G G L A   EI+ TF LVYTV++ A DPK  +    +  +AP+ IGF V    LA    +G  +NPA + G AV+      W + W++W GP +G  IA   ++
Sbjct:  126 GGLAVPAFGLSAGVGVLNAFVFEIVMTFGLVYTVYATAIDPKNGS----LGTIAPIAIGFIVGANILAGGAFSGASMNPAVAFGPAVV---SWTWTNHWVYWAGPLVGGGIAGLIYE 235          
BLAST of BQ623325 vs. ExPASy Swiss-Prot
Match: MIP_CAVPO (Lens fiber major intrinsic protein OS=Cavia porcellus GN=MIP PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 3.343e-11
Identity = 37/112 (33.04%), Postives = 57/112 (50.89%), Query Frame = 2
Query:   77 NELADGYSTGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVIYSKEKAWDDQWIFWVGPFIGAAIAAFYHQFIL 412
            N L  G S       EI  T   V  +F+  D +RN R   V     L +GF++ + HL  +  TG G+NPARS   A++    + + + W++WVGP IG  + +  + F+L
Sbjct:  119 NTLHAGVSVXQATTVEIFLTLQFVLCIFATYDERRNGRLGSVA----LAVGFSLTLGHLFGMYYTGAGMNPARSFAPAIL---TRNFTNHWVYWVGPIIGGGLGSLLYDFLL 223          
The following BLAST results are available for this feature:
BLAST of BQ623325 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 132
Match NameE-valueIdentityDescription
TIP11_ORYSJ6.735e-1237.38Probable aquaporin TIP1-1 OS=Oryza sativa subsp. j... [more]
TIP51_ARATH1.149e-1138.68Probable aquaporin TIP5-1 OS=Arabidopsis thaliana ... [more]
TIP21_MAIZE1.500e-1138.46Aquaporin TIP2-1 OS=Zea mays GN=TIP2-1 PE=2 SV=1[more]
AQPZ_PSEAE1.960e-1135.85Aquaporin Z OS=Pseudomonas aeruginosa GN=aqpZ PE=3... [more]
AQPZ_PHOLL1.960e-1133.96Aquaporin Z OS=Photorhabdus luminescens subsp. lau... [more]
TIP11_MAIZE2.559e-1135.59Aquaporin TIP1-1 OS=Zea mays GN=TIP1-1 PE=2 SV=1[more]
AQPZ_VIBPA2.559e-1135.85Aquaporin Z OS=Vibrio parahaemolyticus GN=aqpZ PE=... [more]
AQPZ_BRAJA2.559e-1136.46Aquaporin Z OS=Bradyrhizobium japonicum GN=aqpZ PE... [more]
TIP11_ARATH3.343e-1138.46Aquaporin TIP1-1 OS=Arabidopsis thaliana GN=TIP1-1... [more]
MIP_CAVPO3.343e-1133.04Lens fiber major intrinsic protein OS=Cavia porcel... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00416 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00416 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623325 ID=BQ623325; Name=BQ623325; organism=Citrus sinensis; type=EST; length=512bp
TTGGGAGCCATATGTGGCTGCGGGCTCGTTAAGGCTTTCCAGAAGTCTTA
CTACATCGAGATACGGCGGTGGAGCCAATGAGCTCGCTGATGGGTACAGC
ACTGGCACTGGATTGGGTGCTGAGATCATCGGTACCTTTGTTCTTGTCTA
CACTGTTTTCTCCGCCACTGATCCCAAGAGAAATGCTAGGGACTCCCACG
TTCCCGTCTTGGCGCCATTGCCAATTGGATTTGCTGTGTTCATGGTTCAC
TTGGCTACGATCCCTGTCACTGGAACTGGCATCAACCCCGCTAGAAGTTT
GGGAGCTGCAGTGATTTACAGCAAGGAGAAGGCTTGGGATGATCAATGGA
TCTTCTGGGTTGGCCCCTTCATTGGTGCTGCAATTGCTGCATTTTACCAC
CAATTCATCCTCAGAGCATCTGCTTCTAAAGCTCTTGGATCCTTCAAAAG
CCTCCTCCAACATTTAAATTAACTTTTAAAATAATTACTGGAGGATTAAT
CAATGGGTGTCA
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