BQ623325

Overview
NameBQ623325
Unique NameBQ623325
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length512
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623325 vs. ExPASy Swiss-Prot
Match: MIP_HUMAN (Lens fiber major intrinsic protein OS=Homo sapiens GN=MIP PE=1 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 7.446e-11
Identity = 36/112 (32.14%), Postives = 56/112 (50.00%), Query Frame = 2
Query:   77 NELADGYSTGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVIYSKEKAWDDQWIFWVGPFIGAAIAAFYHQFIL 412
            N L    S G     EI  T   V  +F+  D +RN +   V     L +GF++ + HL  +  TG G+NPARS   A++      + + W++WVGP IG  + +  + F+L
Sbjct:  119 NTLHPAVSVGQATTVEIFLTLQFVLCIFATYDERRNGQLGSVA----LAVGFSLALGHLFGMYYTGAGMNPARSFAPAILTGN---FTNHWVYWVGPIIGGGLGSLLYDFLL 223          
BLAST of BQ623325 vs. ExPASy Swiss-Prot
Match: AQPZ1_AGRT5 (Aquaporin Z 1 OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=aqpZ1 PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 7.446e-11
Identity = 40/101 (39.60%), Postives = 56/101 (55.45%), Query Frame = 2
Query:   92 GYSTGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPV-LAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVIYSKEKAWDDQWIFWVGPFIGAAIAA 391
            GYS  + L  EII T   +  +  +T  +       VPV  AP+ IG A+ ++HL +IPVT T +NPARS G A ++    A    W+FW+ P +G AI A
Sbjct:  126 GYSLLSALLIEIILTAFFLVVILGSTHGR-------VPVGFAPVAIGLALTLIHLISIPVTNTSVNPARSTGQA-LFVGGWALQQLWLFWLAPILGGAIGA 218          
The following BLAST results are available for this feature:
BLAST of BQ623325 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 132
Match NameE-valueIdentityDescription
MIP_HUMAN7.446e-1132.14Lens fiber major intrinsic protein OS=Homo sapiens... [more]
AQPZ1_AGRT57.446e-1139.60Aquaporin Z 1 OS=Agrobacterium tumefaciens (strain... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00416 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00416 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623325 ID=BQ623325; Name=BQ623325; organism=Citrus sinensis; type=EST; length=512bp
TTGGGAGCCATATGTGGCTGCGGGCTCGTTAAGGCTTTCCAGAAGTCTTA
CTACATCGAGATACGGCGGTGGAGCCAATGAGCTCGCTGATGGGTACAGC
ACTGGCACTGGATTGGGTGCTGAGATCATCGGTACCTTTGTTCTTGTCTA
CACTGTTTTCTCCGCCACTGATCCCAAGAGAAATGCTAGGGACTCCCACG
TTCCCGTCTTGGCGCCATTGCCAATTGGATTTGCTGTGTTCATGGTTCAC
TTGGCTACGATCCCTGTCACTGGAACTGGCATCAACCCCGCTAGAAGTTT
GGGAGCTGCAGTGATTTACAGCAAGGAGAAGGCTTGGGATGATCAATGGA
TCTTCTGGGTTGGCCCCTTCATTGGTGCTGCAATTGCTGCATTTTACCAC
CAATTCATCCTCAGAGCATCTGCTTCTAAAGCTCTTGGATCCTTCAAAAG
CCTCCTCCAACATTTAAATTAACTTTTAAAATAATTACTGGAGGATTAAT
CAATGGGTGTCA
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