BQ623325

Overview
NameBQ623325
Unique NameBQ623325
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length512
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig4610 contig Csv1_Contig4610:526..1036. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623325 vs. ExPASy Swiss-Prot
Match: PIP26_ORYSJ (Probable aquaporin PIP2-6 OS=Oryza sativa subsp. japonica GN=PIP2-6 PE=2 SV=2)

HSP 1 Score: 232.261 bits (591), Expect = 1.025e-60
Identity = 111/129 (86.05%), Postives = 120/129 (93.02%), Query Frame = 2
Query:   65 GGGANELADGYSTGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVIYSKEKAWDDQWIFWVGPFIGAAIAAFYHQFILRASASKALGSFKS 451
            GGGAN +A GYSTGT LGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIP+TGTGINPARS+GAAVIY+++KAWDD WIFW GPFIGA  AA YHQ+ILRA+A KALGSF+S
Sbjct:  150 GGGANMVASGYSTGTALGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSIGAAVIYNQKKAWDDHWIFWAGPFIGALAAAAYHQYILRAAAIKALGSFRS 278          
BLAST of BQ623325 vs. ExPASy Swiss-Prot
Match: PIP1_ATRCA (Aquaporin PIP-type OS=Atriplex canescens PE=2 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 1.204e-60
Identity = 103/130 (79.23%), Postives = 118/130 (90.77%), Query Frame = 2
Query:   62 YGGGANELADGYSTGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVIYSKEKAWDDQWIFWVGPFIGAAIAAFYHQFILRASASKALGSFKS 451
            +GGGAN +A GY+ GT  GAE+IGTFVLVYTVFSATDPKR+ARDSHVP+LAPLPIGFAVFMVHLATIP+TGTGINPARS GAAVIY+K++ WDD WIFWVGPF+GA  AA YHQ++LRA+A KALGSF+S
Sbjct:  149 FGGGANSVALGYNKGTAFGAELIGTFVLVYTVFSATDPKRSARDSHVPILAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKKRVWDDHWIFWVGPFVGALAAAAYHQYVLRAAAIKALGSFRS 278          

HSP 2 Score: 30.0314 bits (66), Expect = 1.204e-60
Identity = 13/17 (76.47%), Postives = 13/17 (76.47%), Query Frame = 1
Query:    4 GAICGCGLVKAFQKSYY 54
            GAICG GLVKAF K  Y
Sbjct:  130 GAICGVGLVKAFMKGPY 146          
BLAST of BQ623325 vs. ExPASy Swiss-Prot
Match: PIP13_ARATH (Aquaporin PIP1-3 OS=Arabidopsis thaliana GN=PIP1-3 PE=1 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 5.853e-57
Identity = 98/123 (79.67%), Postives = 112/123 (91.06%), Query Frame = 2
Query:   65 GGGANELADGYSTGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVIYSKEKAWDDQWIFWVGPFIGAAIAAFYHQFILRASASKA 433
            GGGAN +A GY+ G+GLGAEIIGTFVLVYTVFSATD KR+ARDSHVP+LAPLPIGFAVF+VHLATIP+TGTGINPARSLGAA+IY+K+ AWDD WIFWVGPFIGAA+AA YHQ ++RA   K+
Sbjct:  162 GGGANTVAHGYTKGSGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHAWDDHWIFWVGPFIGAALAALYHQLVIRAIPFKS 284          

HSP 2 Score: 29.261 bits (64), Expect = 5.853e-57
Identity = 12/18 (66.67%), Postives = 14/18 (77.78%), Query Frame = 1
Query:    1 LGAICGCGLVKAFQKSYY 54
            LGAICG G+VK FQ + Y
Sbjct:  141 LGAICGAGVVKGFQPNPY 158          
BLAST of BQ623325 vs. ExPASy Swiss-Prot
Match: PIP11_ORYSJ (Aquaporin PIP1-1 OS=Oryza sativa subsp. japonica GN=PIP1-1 PE=2 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 7.630e-57
Identity = 96/123 (78.05%), Postives = 111/123 (90.24%), Query Frame = 2
Query:   65 GGGANELADGYSTGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVIYSKEKAWDDQWIFWVGPFIGAAIAAFYHQFILRASASKA 433
            GGGAN +A GY+ G GLGAEI+GTF+LVYTVFSATD KRNARDSHVP+LAPLPIGFAVF+VHLATIP+TGTGINPARSLGAA+IY+K+ AW+D WIFWVGPF+GAA+AA YHQ I+RA   K+
Sbjct:  165 GGGANVVASGYTKGDGLGAEIVGTFILVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHAWNDHWIFWVGPFVGAALAAIYHQVIIRAIPFKS 287          

HSP 2 Score: 30.8018 bits (68), Expect = 7.630e-57
Identity = 12/19 (63.16%), Postives = 15/19 (78.95%), Query Frame = 1
Query:    1 LGAICGCGLVKAFQKSYYI 57
            LGAICG G+VK FQ+  Y+
Sbjct:  144 LGAICGAGVVKGFQQGLYM 162          
BLAST of BQ623325 vs. ExPASy Swiss-Prot
Match: PIP15_ARATH (Probable aquaporin PIP1-5 OS=Arabidopsis thaliana GN=PIP1-5 PE=2 SV=2)

HSP 1 Score: 211.075 bits (536), Expect = 7.631e-57
Identity = 97/123 (78.86%), Postives = 112/123 (91.06%), Query Frame = 2
Query:   65 GGGANELADGYSTGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVIYSKEKAWDDQWIFWVGPFIGAAIAAFYHQFILRASASKA 433
            GGGAN +A GY+ G+GLGAEI+GTFVLVYTVFSATD KR+ARDSHVP+LAPLPIGFAVF+VHLATIP+TGTGINPARSLGAA+IY+K+ AWDD WIFWVGPFIGAA+AA YHQ ++RA   K+
Sbjct:  163 GGGANVVAHGYTKGSGLGAEIVGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHAWDDHWIFWVGPFIGAALAALYHQIVIRAIPFKS 285          

HSP 2 Score: 29.6462 bits (65), Expect = 7.631e-57
Identity = 12/18 (66.67%), Postives = 13/18 (72.22%), Query Frame = 1
Query:    1 LGAICGCGLVKAFQKSYY 54
            LGAICG G+VK FQ   Y
Sbjct:  142 LGAICGAGVVKGFQPGLY 159          
BLAST of BQ623325 vs. ExPASy Swiss-Prot
Match: PIP12_ORYSJ (Probable aquaporin PIP1-2 OS=Oryza sativa subsp. japonica GN=PIP1-2 PE=2 SV=3)

HSP 1 Score: 208.764 bits (530), Expect = 7.631e-57
Identity = 96/123 (78.05%), Postives = 110/123 (89.43%), Query Frame = 2
Query:   65 GGGANELADGYSTGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVIYSKEKAWDDQWIFWVGPFIGAAIAAFYHQFILRASASKA 433
            GGGAN +A GY+ G GLGAEI+GTF+LVYTVFSATD KRNARDSHVP+LAPLPIGFAVF+VHLATIP+TGTGINPARSLGAA+IY++  AWDD WIFWVGPFIGAA+AA YHQ ++RA   K+
Sbjct:  164 GGGANVVAPGYTKGDGLGAEIVGTFILVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNRGHAWDDHWIFWVGPFIGAALAAIYHQVVIRAIPFKS 286          

HSP 2 Score: 31.9574 bits (71), Expect = 7.631e-57
Identity = 13/18 (72.22%), Postives = 14/18 (77.78%), Query Frame = 1
Query:    1 LGAICGCGLVKAFQKSYY 54
            LGAICG G+VK FQK  Y
Sbjct:  143 LGAICGAGVVKGFQKGLY 160          
BLAST of BQ623325 vs. ExPASy Swiss-Prot
Match: PIP14_ARATH (Probable aquaporin PIP1-4 OS=Arabidopsis thaliana GN=PIP1.4 PE=1 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 1.297e-56
Identity = 97/123 (78.86%), Postives = 112/123 (91.06%), Query Frame = 2
Query:   65 GGGANELADGYSTGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVIYSKEKAWDDQWIFWVGPFIGAAIAAFYHQFILRASASKA 433
            GGGAN +A GY+ G+GLGAEIIGTFVLVYTVFSATD KR+ARDSHVP+LAPLPIGFAVF+VHLATIP+TGTGINPARSLGAA+IY+K+ +WDD WIFWVGPFIGAA+AA YHQ ++RA   K+
Sbjct:  163 GGGANTVAHGYTKGSGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHSWDDHWIFWVGPFIGAALAALYHQIVIRAIPFKS 285          

HSP 2 Score: 29.261 bits (64), Expect = 1.297e-56
Identity = 12/18 (66.67%), Postives = 14/18 (77.78%), Query Frame = 1
Query:    1 LGAICGCGLVKAFQKSYY 54
            LGAICG G+VK FQ + Y
Sbjct:  142 LGAICGAGVVKGFQPTPY 159          
BLAST of BQ623325 vs. ExPASy Swiss-Prot
Match: PIP12_ARATH (Aquaporin PIP1-2 OS=Arabidopsis thaliana GN=PIP1-2 PE=1 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 1.691e-56
Identity = 96/123 (78.05%), Postives = 111/123 (90.24%), Query Frame = 2
Query:   65 GGGANELADGYSTGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVIYSKEKAWDDQWIFWVGPFIGAAIAAFYHQFILRASASKA 433
            GGGAN +A GY+ G+GLGAEIIGTFVLVYTVFSATD KRNARDSHVP+LAPLPIGFAVF+VHLATIP+TGTGINPARSLGAA+I++K+ AWDD W+FWVGPFIGAA+AA YH  ++RA   K+
Sbjct:  162 GGGANTIAHGYTKGSGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDNAWDDHWVFWVGPFIGAALAALYHVIVIRAIPFKS 284          

HSP 2 Score: 29.6462 bits (65), Expect = 1.691e-56
Identity = 12/18 (66.67%), Postives = 13/18 (72.22%), Query Frame = 1
Query:    1 LGAICGCGLVKAFQKSYY 54
            LGAICG G+VK FQ   Y
Sbjct:  141 LGAICGAGVVKGFQPKQY 158          
BLAST of BQ623325 vs. ExPASy Swiss-Prot
Match: PIP13_MAIZE (Aquaporin PIP1-3/PIP1-4 OS=Zea mays GN=PIP1-3 PE=2 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 2.204e-56
Identity = 96/123 (78.05%), Postives = 110/123 (89.43%), Query Frame = 2
Query:   65 GGGANELADGYSTGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVIYSKEKAWDDQWIFWVGPFIGAAIAAFYHQFILRASASKA 433
            GGGAN +A GY+ G GLGAEI+GTF+LVYTVFSATD KRNARDSHVP+LAPLPIGFAVF+VHLATIP+TGTGINPARSLGAA+IY+++ AW D WIFWVGPFIGAA+AA YHQ I+RA   K+
Sbjct:  168 GGGANVVAPGYTKGDGLGAEIVGTFILVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNRDHAWSDHWIFWVGPFIGAALAAIYHQVIIRAIPFKS 290          

HSP 2 Score: 30.8018 bits (68), Expect = 2.204e-56
Identity = 12/19 (63.16%), Postives = 15/19 (78.95%), Query Frame = 1
Query:    1 LGAICGCGLVKAFQKSYYI 57
            LGAICG G+VK FQ+  Y+
Sbjct:  147 LGAICGAGVVKGFQQGLYM 165          
BLAST of BQ623325 vs. ExPASy Swiss-Prot
Match: PIP12_MAIZE (Aquaporin PIP1-2 OS=Zea mays GN=PIP1-2 PE=1 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 2.204e-56
Identity = 96/123 (78.05%), Postives = 111/123 (90.24%), Query Frame = 2
Query:   65 GGGANELADGYSTGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVIYSKEKAWDDQWIFWVGPFIGAAIAAFYHQFILRASASKA 433
            GGGAN +A GY+ G GLGAEI+GTF+LVYTVFSATD KRNARDSHVP+LAPLPIGFAVF+VHLATIP+TGTGINPARSLGAA+IY+++ AW+D WIFWVGPFIGAA+AA YHQ I+RA   K+
Sbjct:  165 GGGANVVAPGYTKGDGLGAEIVGTFILVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNRDHAWNDHWIFWVGPFIGAALAAIYHQVIIRAIPFKS 287          

HSP 2 Score: 30.4166 bits (67), Expect = 2.204e-56
Identity = 11/19 (57.89%), Postives = 15/19 (78.95%), Query Frame = 1
Query:    1 LGAICGCGLVKAFQKSYYI 57
            LGA+CG G+VK FQ+  Y+
Sbjct:  144 LGAVCGAGVVKGFQQGLYM 162          
The following BLAST results are available for this feature:
BLAST of BQ623325 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 132
Match NameE-valueIdentityDescription
PIP26_ORYSJ1.025e-6086.05Probable aquaporin PIP2-6 OS=Oryza sativa subsp. j... [more]
PIP1_ATRCA1.204e-6079.23Aquaporin PIP-type OS=Atriplex canescens PE=2 SV=1[more]
PIP13_ARATH5.853e-5779.67Aquaporin PIP1-3 OS=Arabidopsis thaliana GN=PIP1-3... [more]
PIP11_ORYSJ7.630e-5778.05Aquaporin PIP1-1 OS=Oryza sativa subsp. japonica G... [more]
PIP15_ARATH7.631e-5778.86Probable aquaporin PIP1-5 OS=Arabidopsis thaliana ... [more]
PIP12_ORYSJ7.631e-5778.05Probable aquaporin PIP1-2 OS=Oryza sativa subsp. j... [more]
PIP14_ARATH1.297e-5678.86Probable aquaporin PIP1-4 OS=Arabidopsis thaliana ... [more]
PIP12_ARATH1.691e-5678.05Aquaporin PIP1-2 OS=Arabidopsis thaliana GN=PIP1-2... [more]
PIP13_MAIZE2.204e-5678.05Aquaporin PIP1-3/PIP1-4 OS=Zea mays GN=PIP1-3 PE=2... [more]
PIP12_MAIZE2.204e-5678.05Aquaporin PIP1-2 OS=Zea mays GN=PIP1-2 PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00416 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00416 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623325 ID=BQ623325; Name=BQ623325; organism=Citrus sinensis; type=EST; length=512bp
TTGGGAGCCATATGTGGCTGCGGGCTCGTTAAGGCTTTCCAGAAGTCTTA
CTACATCGAGATACGGCGGTGGAGCCAATGAGCTCGCTGATGGGTACAGC
ACTGGCACTGGATTGGGTGCTGAGATCATCGGTACCTTTGTTCTTGTCTA
CACTGTTTTCTCCGCCACTGATCCCAAGAGAAATGCTAGGGACTCCCACG
TTCCCGTCTTGGCGCCATTGCCAATTGGATTTGCTGTGTTCATGGTTCAC
TTGGCTACGATCCCTGTCACTGGAACTGGCATCAACCCCGCTAGAAGTTT
GGGAGCTGCAGTGATTTACAGCAAGGAGAAGGCTTGGGATGATCAATGGA
TCTTCTGGGTTGGCCCCTTCATTGGTGCTGCAATTGCTGCATTTTACCAC
CAATTCATCCTCAGAGCATCTGCTTCTAAAGCTCTTGGATCCTTCAAAAG
CCTCCTCCAACATTTAAATTAACTTTTAAAATAATTACTGGAGGATTAAT
CAATGGGTGTCA
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