BQ623325

Overview
NameBQ623325
Unique NameBQ623325
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length512
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623325 vs. ExPASy Swiss-Prot
Match: AQP6_HUMAN (Aquaporin-6 OS=Homo sapiens GN=AQP6 PE=2 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 3.571e-13
Identity = 41/114 (35.96%), Postives = 62/114 (54.39%), Query Frame = 2
Query:   71 GANELADGYSTGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVIYSKEKAWDDQWIFWVGPFIGAAIAAFYHQFIL 412
            G N + +  STG  +  E++ T  LV  VF++TD ++ +            IG +V + HL  I  TG  +NPARS G A+I  K   +   W+FWVGP +GA +A+  + F+L
Sbjct:  131 GINVVRNSVSTGQAVAVELLLTLQLVLCVFASTDSRQTSGSPATM------IGISVALGHLIGIHFTGCSMNPARSFGPAIIIGK---FTVHWVFWVGPLMGALLASLIYNFVL 235          
BLAST of BQ623325 vs. ExPASy Swiss-Prot
Match: TIP22_ARATH (Probable aquaporin TIP2-2 OS=Arabidopsis thaliana GN=TIP2-2 PE=1 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 4.664e-13
Identity = 45/118 (38.14%), Postives = 65/118 (55.08%), Query Frame = 2
Query:   83 LADGYSTGTGLGAEIIGTFVLVYTVFS-ATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVIYSKEKAWDDQWIFWVGPFIGAAIAAFYHQFILRASASKA 433
            +A G     G+  EI+ TF LVYTV++ A DPK+ +    +  +AP+ IGF V    LA  P +G  +NPARS G AV+      +   WI+WVGP +G A+A   +  +   S + A
Sbjct:  133 VAAGLGAIEGVVMEIVVTFALVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVSGD---FSQIWIYWVGPLVGGALAGLIYGDVFIGSYAPA 243          
BLAST of BQ623325 vs. ExPASy Swiss-Prot
Match: TIP1_TOBAC (Probable aquaporin TIP-type RB7-5A OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 4.664e-13
Identity = 44/107 (41.12%), Postives = 61/107 (57.01%), Query Frame = 2
Query:   83 LADGYSTGTGLGAEIIGTFVLVYTVFS-ATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVIYSKEKAWDDQWIFWVGPFIGAAIAAFYH 400
            +A G +   G+  EII TF LVYTV++ A DPK+ +    +  +AP+ IGF V    LA  P +G  +NPARS G AV+      +   WI+W GP IG  +A F +
Sbjct:  133 VAAGLNGLQGVVMEIIITFALVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVAGD---FSQNWIYWAGPLIGGGLAGFIY 232          
BLAST of BQ623325 vs. ExPASy Swiss-Prot
Match: TIP13_ARATH (Aquaporin TIP1-3 OS=Arabidopsis thaliana GN=TIP1-3 PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 4.664e-13
Identity = 47/117 (40.17%), Postives = 63/117 (53.85%), Query Frame = 2
Query:   74 ANELADGYSTGTGLGAEIIGTFVLVYTVFS-ATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVIYSKEKAWDDQWIFWVGPFIGAAIAAFYHQFILRAS 421
            A  L+ G +    +  EI+ TF LVYTV++ A DPK+      + ++APL IG  V    L      G  +NPA S G AV+      W + W++WVGPFIGAAIAA  +  I   S
Sbjct:  132 AFSLSYGVTPWNAVVFEIVMTFGLVYTVYATAVDPKKG----DIGIIAPLAIGLIVGANILVGGAFDGASMNPAVSFGPAVV---SWIWTNHWVYWVGPFIGAAIAAIVYDTIFIGS 241          
BLAST of BQ623325 vs. ExPASy Swiss-Prot
Match: AQPZ_VIBVU (Aquaporin Z OS=Vibrio vulnificus GN=aqpZ PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 6.092e-13
Identity = 38/106 (35.85%), Postives = 58/106 (54.72%), Query Frame = 2
Query:   92 GYSTGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVIYSKEKAWDDQWIFWVGPFIGAAIAAFYHQFI 409
            GYS  + L  E++ T + +  +  ATD +           AP+ IG  + ++HL +IPVT T +NPARS G A +Y  + A    W+FWV P +GA + A  ++ I
Sbjct:  127 GYSLTSALVTEVVMTMMFLLVILGATDQRAPQG------FAPIAIGLCLTLIHLISIPVTNTSVNPARSTGVA-LYVGDWATAQLWLFWVAPILGALLGAVAYKLI 225          
BLAST of BQ623325 vs. ExPASy Swiss-Prot
Match: AQPZ_BRUME (Aquaporin Z OS=Brucella melitensis GN=aqpZ PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 6.092e-13
Identity = 44/115 (38.26%), Postives = 61/115 (53.04%), Query Frame = 2
Query:   71 GANELADG-YSTGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVIYSKEKAWDDQWIFWVGPFIGAAIAAFYHQFIL 412
            G  EL+ G YS   GL  EII T   +  +  +T     A        AP+ IGF + ++HL +IPVT T +NPARS G A +++   A    W+FWV P +GA I A   + +L
Sbjct:  118 GYGELSPGGYSMMAGLLIEIILTAFFIIIILGSTSSLAPAG------FAPIAIGFGLTLIHLVSIPVTNTWVNPARSTGVA-LFADTAALSQLWLFWVAPLVGAVIGAIIWKGLL 225          
BLAST of BQ623325 vs. ExPASy Swiss-Prot
Match: AQPZ_BORPA (Aquaporin Z OS=Bordetella parapertussis GN=aqpZ PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 6.092e-13
Identity = 40/112 (35.71%), Postives = 61/112 (54.46%), Query Frame = 2
Query:   95 YSTGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVIYSKEKAWDDQWIFWVGPFIGAAIAAFYHQFILRASASK 430
            YS    L  EI+ +   V+ +  ATD +  A        AP+PIG A+ ++HL +IPVT T +NPARS G A ++    A +  W+FW+ P  GA + A  ++ +   SA +
Sbjct:  132 YSMQAALICEIVLSAGFVFVILGATDKRAPAG------FAPIPIGLALTLIHLISIPVTNTSVNPARSTGPA-LFVGGWALEQLWLFWLAPIAGALVGALAYRLVGTPSAQR 236          
BLAST of BQ623325 vs. ExPASy Swiss-Prot
Match: AQPZ_BORBR (Aquaporin Z OS=Bordetella bronchiseptica GN=aqpZ PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 6.092e-13
Identity = 40/112 (35.71%), Postives = 61/112 (54.46%), Query Frame = 2
Query:   95 YSTGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVIYSKEKAWDDQWIFWVGPFIGAAIAAFYHQFILRASASK 430
            YS    L  EI+ +   V+ +  ATD +  A        AP+PIG A+ ++HL +IPVT T +NPARS G A ++    A +  W+FW+ P  GA + A  ++ +   SA +
Sbjct:  132 YSMQAALICEIVLSAGFVFVILGATDKRAPAG------FAPIPIGLALTLIHLISIPVTNTSVNPARSTGPA-LFVGGWALEQLWLFWLAPIAGALVGALAYRLVGTPSAQR 236          
BLAST of BQ623325 vs. ExPASy Swiss-Prot
Match: TIPA_PHAVU (Probable aquaporin TIP-type alpha OS=Phaseolus vulgaris PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.357e-12
Identity = 44/108 (40.74%), Postives = 62/108 (57.41%), Query Frame = 2
Query:   98 STGTGLG----AEIIGTFVLVYTVF-SATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVIYSKEKAWDDQWIFWVGPFIGAAIAAFYHQF 406
            S G G+G     E++ TF L+YTV+ +A DPKR A    V  +APL IG  V    L   P  G  +NPA + G +++  +   W   WIFWVGP +GAA+AA  +++
Sbjct:  136 SPGVGVGHMFILEVVMTFGLMYTVYGTAIDPKRGA----VSYIAPLAIGLIVGANILVGGPFDGACMNPALAFGPSLVGWQ---WHQHWIFWVGPLLGAALAALVYEY 236          
BLAST of BQ623325 vs. ExPASy Swiss-Prot
Match: TIP23_ARATH (Aquaporin TIP2-3 OS=Arabidopsis thaliana GN=TIP2-3 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.772e-12
Identity = 44/109 (40.37%), Postives = 60/109 (55.05%), Query Frame = 2
Query:   95 YSTGTGLGA------EIIGTFVLVYTVFS-ATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVIYSKEKAWDDQWIFWVGPFIGAAIAAFYH 400
            +    GLGA      EI+ TF LVYTV++ A DPK+ +    +  +AP+ IGF V    LA  P +G  +NPARS G AV+          WI+WVGP +G A+A   +
Sbjct:  131 HGVSAGLGAVEGVVMEIVVTFALVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVSGD---LSQIWIYWVGPLVGGALAGLIY 232          
The following BLAST results are available for this feature:
BLAST of BQ623325 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 132
Match NameE-valueIdentityDescription
AQP6_HUMAN3.571e-1335.96Aquaporin-6 OS=Homo sapiens GN=AQP6 PE=2 SV=2[more]
TIP22_ARATH4.664e-1338.14Probable aquaporin TIP2-2 OS=Arabidopsis thaliana ... [more]
TIP1_TOBAC4.664e-1341.12Probable aquaporin TIP-type RB7-5A OS=Nicotiana ta... [more]
TIP13_ARATH4.664e-1340.17Aquaporin TIP1-3 OS=Arabidopsis thaliana GN=TIP1-3... [more]
AQPZ_VIBVU6.092e-1335.85Aquaporin Z OS=Vibrio vulnificus GN=aqpZ PE=3 SV=1[more]
AQPZ_BRUME6.092e-1338.26Aquaporin Z OS=Brucella melitensis GN=aqpZ PE=3 SV... [more]
AQPZ_BORPA6.092e-1335.71Aquaporin Z OS=Bordetella parapertussis GN=aqpZ PE... [more]
AQPZ_BORBR6.092e-1335.71Aquaporin Z OS=Bordetella bronchiseptica GN=aqpZ P... [more]
TIPA_PHAVU1.357e-1240.74Probable aquaporin TIP-type alpha OS=Phaseolus vul... [more]
TIP23_ARATH1.772e-1240.37Aquaporin TIP2-3 OS=Arabidopsis thaliana GN=TIP2-3... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00416 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00416 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623325 ID=BQ623325; Name=BQ623325; organism=Citrus sinensis; type=EST; length=512bp
TTGGGAGCCATATGTGGCTGCGGGCTCGTTAAGGCTTTCCAGAAGTCTTA
CTACATCGAGATACGGCGGTGGAGCCAATGAGCTCGCTGATGGGTACAGC
ACTGGCACTGGATTGGGTGCTGAGATCATCGGTACCTTTGTTCTTGTCTA
CACTGTTTTCTCCGCCACTGATCCCAAGAGAAATGCTAGGGACTCCCACG
TTCCCGTCTTGGCGCCATTGCCAATTGGATTTGCTGTGTTCATGGTTCAC
TTGGCTACGATCCCTGTCACTGGAACTGGCATCAACCCCGCTAGAAGTTT
GGGAGCTGCAGTGATTTACAGCAAGGAGAAGGCTTGGGATGATCAATGGA
TCTTCTGGGTTGGCCCCTTCATTGGTGCTGCAATTGCTGCATTTTACCAC
CAATTCATCCTCAGAGCATCTGCTTCTAAAGCTCTTGGATCCTTCAAAAG
CCTCCTCCAACATTTAAATTAACTTTTAAAATAATTACTGGAGGATTAAT
CAATGGGTGTCA
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