BQ623326

Overview
NameBQ623326
Unique NameBQ623326
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length616
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of BQ623326 vs. ExPASy Swiss-Prot
Match: CCPR_CANGA (Cytochrome c peroxidase, mitochondrial OS=Candida glabrata GN=CAGL0K08184g PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.259e-11
Identity = 37/113 (32.74%), Postives = 58/113 (51.33%), Query Frame = 2 
Query:   20 PQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALSGGHTLGRCHKERSGFEGPWTRNPLIFDNSYFTELLT---------------GEKDGLLQLPSDKALLDDPVFRPLVEK 313
            P  GRLPD  +  +++R  F  ++  +D+++VAL G H LG+ H + SGFEGPW     IF N ++  LL                    G + LP+D AL+ D  +  +V++
Sbjct:  203 PDNGRLPDGDKDANYVRN-FYKRLDFNDREVVALLGAHALGKTHLKNSGFEGPWGAANNIFTNEFYLNLLNEDWKLEKNDAGNLQYNSPKGYMMLPTDYALIQDSNYLKIVKE 314
The following BLAST results are available for this feature:
BLAST of BQ623326 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
CCPR_CANGA2.259e-1132.74Cytochrome c peroxidase, mitochondrial OS=Candida ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00417 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00417 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623326 ID=BQ623326; Name=BQ623326; organism=Citrus sinensis; type=EST; length=616bp
AGATGACAAGGCTGAGCCACCTCAAGAAGGCCGGCTTCCTGATGCTAAAC
AGGGTAATGATCACTTGAGGCAAGTCTTTGGTGCTCAGATGGGCCTCAGC
GACAAGGATATTGTTGCTCTCTCTGGTGGCCACACCCTGGGAAGGTGCCA
CAAGGAGAGGTCTGGATTTGAGGGACCATGGACCCGCAACCCTCTCATTT
TTGACAATTCCTACTTCACGGAGCTCTTGACTGGTGAGAAGGATGGTCTT
CTGCAATTGCCATCCGACAAGGCCCTTCTGGATGACCCTGTTTTCCGCCC
TCTTGTTGAGAAATATGCTGCGGATGAGGACGCTTTCTTCGCTGATTATG
CTGAGGCTCATCTCAAGCTCTCTGAGCTAGGATTTGCTGAAGCCTAAATT
TACCTGAGTAAATAAATGGTTGGAATGATGCCAACAACAGTGTGCCTCTA
TTTTATGTTTTTTGAATTCTCAGAAAATTCGAATTTCAAGATGTTGTTGG
TGGAATTTTGTGGGTTTGGTTTTGGTGCCATGGTGGATTGTGAAAAGTTG
GGTCGAATACTATGGTTACTATCATCCTTTAGAACTAATAATATCAACTG
GTTTCAGACTAAAAAA
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