BQ623328
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_PROM1 (Tryptophan synthase alpha chain OS=Prochlorococcus marinus (strain NATL1A) GN=trpA PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 7.381e-27 Identity = 61/117 (52.14%), Postives = 82/117 (70.09%), Query Frame = 2 Query: 53 LSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSLKSA 403 + LVL PTTP DRMK I S GF YLVS GVTG R+S+ +V +L++++K+SS+ P+AVGFGIS +H++QV WGADG IVGSA+VK + A S E ++E F K L++A Sbjct: 149 IDLVLLVAPTTPKDRMKKIAATSNGFTYLVSVTGVTGERSSLEDNVGSLVQQLKDSSSSPIAVGFGISDVKHIEQVREWGADGAIVGSALVKRIANA-SIEMKVEEAGSFCKELRAA 264
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_GLOVI (Tryptophan synthase alpha chain OS=Gloeobacter violaceus GN=trpA PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 4.785e-26 Identity = 60/117 (51.28%), Postives = 82/117 (70.09%), Query Frame = 2 Query: 53 LSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSLKSA 403 L ++ PT+P +R++ I E + GFVYLVS+ GVTGAR ++ V+T L +++ +T+PVAVGFGIS PE +VA GADGVIVGSA V+LL A +PEE L +L +F + LK A Sbjct: 153 LDVIWLVAPTSPPERLRRIAERTTGFVYLVSTTGVTGARTQVASSVRTSLAQLRALTTRPVAVGFGISTPEQAHEVASLGADGVIVGSACVQLLATA-APEERLGQLAEFCRQLKKA 268
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_PROMM (Tryptophan synthase alpha chain OS=Prochlorococcus marinus (strain MIT 9313) GN=trpA PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 2.375e-25 Identity = 61/117 (52.14%), Postives = 79/117 (67.52%), Query Frame = 2 Query: 53 LSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSLKSA 403 L LVL PTTP +RM I E+S GF YLVS GVTG R+ + VQ+L++++K S + PVAVGFGIS P+ V+QV WGADG IVGSA+VK + A +P +E F K L++A Sbjct: 158 LDLVLLVAPTTPAERMARIAESSRGFTYLVSVTGVTGERSVMEDRVQSLVQQLKLSGSNPVAVGFGISGPQQVRQVRSWGADGAIVGSALVKRMA-AAAPGLVAQEAGLFCKELRNA 273
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_PROMP (Tryptophan synthase alpha chain OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=trpA PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 9.023e-25 Identity = 55/117 (47.01%), Postives = 79/117 (67.52%), Query Frame = 2 Query: 53 LSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSLKSA 403 + L+L PTTP++RMK I ++GF YLVS GVTG R + V+ L+ +++E S PVAVGFGIS PEHV +V WGADGVI+GSA VK + + + +E + ++ KF + ++ A Sbjct: 161 IDLILLVAPTTPSERMKIISNNTKGFTYLVSVTGVTGERNKMENRVENLITKLQEISINPVAVGFGISSPEHVNKVRKWGADGVIIGSAFVKRISNS-NEKEVVNQIGKFCEEMRKA 276
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_ACAM1 (Tryptophan synthase alpha chain OS=Acaryochloris marina (strain MBIC 11017) GN=trpA PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.178e-24 Identity = 54/118 (45.76%), Postives = 77/118 (65.25%), Query Frame = 2 Query: 53 LSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSLKSAL 406 + + L PT+ +R++ I S+GF+YLVS+ GVTG R + VQ L+ ++++ + KP+ VGFGIS+ EH +QV WGAD IVGSA V L E SP +GL + F +SLKS+L Sbjct: 147 IEVTLLVAPTSSKERIEKIALRSQGFIYLVSTTGVTGMRTKVENRVQDLIADLRQVTDKPIGVGFGISRTEHARQVMDWGADAAIVGSAFVNRLSEG-SPSQGLSAISTFCRSLKSSL 263
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_PROMA (Tryptophan synthase alpha chain OS=Prochlorococcus marinus GN=trpA PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 1.239e-24 Identity = 59/117 (50.43%), Postives = 76/117 (64.96%), Query Frame = 2 Query: 53 LSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSLKSA 403 L LVL PTTP +RM+ I + S GF YLVS GVTG R+++ VQ L+ E++ S+ PVAVGFGIS +HV QV WGADG I+GSA+VK + A + +E +E KF L A Sbjct: 149 LDLVLLVAPTTPKERMRKISQRSNGFTYLVSVTGVTGERSALENRVQLLINELRGFSSTPVAVGFGISDTKHVIQVKRWGADGAIIGSALVKRISNATTGQEA-EEAGKFCSELYKA 264 HSP 2 Score: 21.1718 bits (43), Expect = 1.239e-24 Identity = 8/19 (42.11%), Postives = 12/19 (63.16%), Query Frame = 1 Query: 1 VPLEETESLQKEAMKNKIE 57 +PLEETE L A+ ++ Sbjct: 132 LPLEETEKLSSIALSKNLD 150
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_ANAVT (Tryptophan synthase alpha chain OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=trpA PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 1.539e-24 Identity = 54/118 (45.76%), Postives = 81/118 (68.64%), Query Frame = 2 Query: 53 LSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSLKSAL 406 + L+L PT+ ++R++AI +S+GF+YLVS GVTG R+ + G V LL+++++ + KP+ VGFGIS+P QV WGAD IVGSA V+ L +P EGL + +F +SLK+A+ Sbjct: 147 IDLILLIAPTSSSERIEAIARSSQGFIYLVSVTGVTGMRSQVEGRVLDLLQKVRQVTDKPLGVGFGISQPAQATQVRDWGADAAIVGSAFVQRLATG-TPAEGLSAIAEFCQSLKAAI 263
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_SYNPX (Tryptophan synthase alpha chain OS=Synechococcus sp. (strain WH8102) GN=trpA PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.010e-24 Identity = 63/120 (52.50%), Postives = 77/120 (64.17%), Query Frame = 2 Query: 53 LSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLL---GEAQSPEEGLKELEKFAKSLKSA 403 L LVL PTTP DRM I + S GF YLVS GVTG RA + V+ L+ E+K+SS PVAVGFGIS + V+QV WGADG IVGSA+VK + GE Q EE +F + L++A Sbjct: 152 LDLVLLVAPTTPADRMVRIGQRSRGFTYLVSVTGVTGERAQMETRVEGLVEELKQSSAVPVAVGFGISGADQVRQVRSWGADGAIVGSALVKRMAAAGEGQIAEEA----GQFCRELRNA 267
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_SYNS9 (Tryptophan synthase alpha chain OS=Synechococcus sp. (strain CC9902) GN=trpA PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 2.222e-23 Identity = 61/117 (52.14%), Postives = 77/117 (65.81%), Query Frame = 2 Query: 53 LSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQ----SPEEGL--KELEKFA 385 L LVL PTTPT+RM I ++S GF YLVS GVTG R+++ V+ L++ +K+SS PVAVGFGIS + V+QV WGADG IVGSA+VK + A + E GL EL K A Sbjct: 152 LDLVLLVAPTTPTERMGRIAQSSRGFTYLVSVTGVTGERSTMETRVEGLVQALKQSSPVPVAVGFGISGVDQVRQVRSWGADGAIVGSALVKRMASASLGSVAAEAGLFCSELRKAA 268
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_METJA (Tryptophan synthase alpha chain OS=Methanocaldococcus jannaschii GN=trpA PE=3 SV=2) HSP 1 Score: 105.916 bits (263), Expect = 1.441e-22 Identity = 56/125 (44.80%), Postives = 81/125 (64.80%), Query Frame = 2 Query: 44 KIRLSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLL-------GEAQSPEEGLKELEKFAKSLK 397 K + L+ PTTP +R+K I+E GFVY+VS G+TGAR ++ + L++ +K+ S P VGFGISK EHV+++ ADG IVGSA+VK++ G+ + E+ LKELE+F K+LK Sbjct: 145 KYGVDLIFLVAPTTPDERLKKILEKCSGFVYVVSVTGITGAREKVAEETKELIKRVKKFSKIPACVGFGISKREHVEEITEI-ADGAIVGSAIVKIVEKHLDENGQIKDEEKFLKELEEFVKNLK 268 The following BLAST results are available for this feature:
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 363
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623328 ID=BQ623328; Name=BQ623328; organism=Citrus sinensis; type=EST; length=575bpback to top |