BQ623328
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_AERHH (Tryptophan synthase alpha chain OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=trpA PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 2.228e-15 Identity = 43/127 (33.86%), Postives = 68/127 (53.54%), Query Frame = 2 Query: 26 YRRKP*KIRLSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLL-GEAQSPEEGLKELEKFAKSLKSA 403 Y+ K + + P + +K + E G+ YLVS GVTGA V+ L+ ++E + P +GFGIS+P V++ GA G I GSA+VK++ Q+PE L L++F + +K+A Sbjct: 139 YKAAADKFGIDSIFIAPPNGDAETLKQVAELGNGYTYLVSRAGVTGAETKAGMPVEGLINTLREFNAPPALLGFGISEPTQVREAIAAGAAGAISGSAVVKIIETHHQNPEHMLNRLKEFVEGMKAA 265
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_PSEPF (Tryptophan synthase alpha chain OS=Pseudomonas fluorescens (strain Pf0-1) GN=trpA PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 2.909e-15 Identity = 40/118 (33.90%), Postives = 66/118 (55.93%), Query Frame = 2 Query: 53 LSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSLKSAL 406 + + TTPTT R+ ++ S GFVY VS GVTGA A+ HV+ + ++ + P+++GFGI PE +A ADGV+VGSA++ + A +P++ + + +L + Sbjct: 148 IDFIRLTTPTTDDARLPKVLNGSSGFVYYVSVAGVTGAGAATLEHVEEAVARLRRHTDLPISIGFGIRTPEQAASIARL-ADGVVVGSALIDHIANATTPDQAIDGVLSLCSALSEGV 264
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_PSEF5 (Tryptophan synthase alpha chain OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=trpA PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 2.909e-15 Identity = 40/104 (38.46%), Postives = 63/104 (60.58%), Query Frame = 2 Query: 53 LSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGL 364 + + TTPTT R+ +++ S GFVY VS GVTGA A+ HV+ + ++ + P+++GFGI PE +A ADGV+VGSA++ + A+S E+ + Sbjct: 148 IDFIRLTTPTTDDARLPKVLDGSSGFVYYVSVAGVTGAGAATLEHVEEAVARLRRHTDLPISIGFGIRTPEQAAAIARL-ADGVVVGSALIDHIASAESSEQAV 250
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_BACLD (Tryptophan synthase alpha chain OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=trpA PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 2.909e-15 Identity = 47/124 (37.90%), Postives = 74/124 (59.68%), Query Frame = 2 Query: 53 LSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGE-------AQSPEEGLKELEKFAKSLKSA 403 ++ + PT+ + R++ I + +EGFVY VSS+GVTG R V + +R +K S+ PVAVGFGIS + V+ + ADGV+VGSA+V+ + E ++ E+ LK E +AK+ + Sbjct: 142 ITYISLVAPTSES-RIQKITQQAEGFVYCVSSLGVTGVRNEFEDSVSSFIRSVKGMSSVPVAVGFGISSSKQVEMMNEL-ADGVVVGSALVRKIEELKDELVAPETREQALKAFEAYAKTFSGS 263
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_HERA2 (Tryptophan synthase alpha chain OS=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) GN=trpA PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 3.800e-15 Identity = 48/117 (41.03%), Postives = 68/117 (58.12%), Query Frame = 2 Query: 53 LSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSLKSA 403 L LV PT+ R+ I S GF+Y V+ GVTGARA+++ + L +++ S P AVGFGISKPEHV VA A+G I SA++ +G + EE ++F +SL+ A Sbjct: 148 LDLVFLLAPTSTDARIAKIASLSSGFIYCVALRGVTGARAALADDLGDFLARVRQYSQLPRAVGFGISKPEHVAAVAKM-AEGAICASALLDYIGNLPA-EERATGAQQFVQSLRDA 262
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_THETN (Tryptophan synthase alpha chain OS=Thermoanaerobacter tengcongensis GN=trpA PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 4.963e-15 Identity = 45/121 (37.19%), Postives = 75/121 (61.98%), Query Frame = 2 Query: 44 KIRLSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSLKSAL 406 K + L+ PT+ +R+K I E +GFVY V+ GVTGAR I+ ++ +R + ++ P A+GFGIS PE +++ +DG++VGSA+V+ + + + E LKE+++F SL+ L Sbjct: 144 KYEIYLIPLVAPTSK-ERIKGITENGKGFVYCVTLTGVTGAREEITTDLEEYMRLVSSYTSMPKALGFGISGPEMARKLKSL-SDGIVVGSAIVERIAKGYNRCEMLKEVKEFVLSLREVL 262
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_STRCO (Tryptophan synthase alpha chain OS=Streptomyces coelicolor GN=trpA PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 4.963e-15 Identity = 47/124 (37.90%), Postives = 66/124 (53.23%), Query Frame = 2 Query: 23 LYRRKP*KIRLSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSL 394 L+R K L+ V P++ R+ I GFVY S +GVTG RAS+ + L+R + ++ PV VG G+S +VAG+ ADGVIVGSA VK + +A GL+ + A L Sbjct: 141 LWREHADKHGLATVFVVAPSSRDARLAEITAVGSGFVYAASLMGVTGTRASVGAQAEDLVRRTRATTDTPVCVGLGVSNAAQAAEVAGF-ADGVIVGSAFVKRMLDAPDDAAGLEGVRALAADL 263
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_MYCPA (Tryptophan synthase alpha chain OS=Mycobacterium paratuberculosis GN=trpA PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 4.963e-15 Identity = 46/118 (38.98%), Postives = 65/118 (55.08%), Query Frame = 2 Query: 53 LSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSLKSAL 406 L + P++ R+ VEAS GFVY S++GVTGAR ++S L+ ++E S PV VG G+ E Q+ G+ ADGVIVGSA+V LG+ GL L + L + + Sbjct: 153 LDRIFLVAPSSTPQRLALTVEASRGFVYAASTMGVTGARDAVSHAAPELVSRVREISDIPVGVGLGVRSREQAAQIGGY-ADGVIVGSALVSALGDG-----GLTALRALTEELAAGV 264
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_MYCA1 (Tryptophan synthase alpha chain OS=Mycobacterium avium (strain 104) GN=trpA PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 4.963e-15 Identity = 46/118 (38.98%), Postives = 65/118 (55.08%), Query Frame = 2 Query: 53 LSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSLKSAL 406 L + P++ R+ VEAS GFVY S++GVTGAR ++S L+ ++E S PV VG G+ E Q+ G+ ADGVIVGSA+V LG+ GL L + L + + Sbjct: 153 LDRIFLVAPSSTPQRLALTVEASRGFVYAASTMGVTGARDAVSHAAPELVSRVREISDIPVGVGLGVRSREQAAQIGGY-ADGVIVGSALVSALGDG-----GLTALRALTEELAAGV 264
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_AERS4 (Tryptophan synthase alpha chain OS=Aeromonas salmonicida (strain A449) GN=trpA PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 4.963e-15 Identity = 43/127 (33.86%), Postives = 67/127 (52.76%), Query Frame = 2 Query: 26 YRRKP*KIRLSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLL-GEAQSPEEGLKELEKFAKSLKSA 403 Y+ K + + P + +K + E G+ YLVS GVTGA V L+ ++E + P +GFGIS+P V++ GA G I GSA+VK++ Q+PE L L++F + +K+A Sbjct: 139 YKAAADKFGIDSIFIAPPNGDAETLKQVAELGSGYTYLVSRAGVTGAETKAGMPVDGLINTLREFNAPPALLGFGISEPAQVREAIAAGAAGAISGSAVVKIIETHHQNPEHMLTRLKEFVEGMKAA 265 The following BLAST results are available for this feature:
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 363
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623328 ID=BQ623328; Name=BQ623328; organism=Citrus sinensis; type=EST; length=575bpback to top |