BQ623328
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_SYNFM (Tryptophan synthase alpha chain OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN=trpA PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 6.482e-15 Identity = 47/119 (39.50%), Postives = 69/119 (57.98%), Query Frame = 2 Query: 53 LSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTK-PVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSLKSAL 406 L+L+ PTTP DRM AI +++ GF+YLVS GVTG + L E++ PV VGFGIS PEH + V+ ADGV+VG+A +++ Q+ ++ + +LK+AL Sbjct: 147 LALIRLVAPTTPPDRMSAIAQSASGFIYLVSMTGVTGGGEPDLTELSFLTSELRSRCDGIPVCVGFGISLPEHARAVSPL-ADGVVVGTAFERIIEAHQNDSAVASKVGEAVGALKAAL 264
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_IDILO (Tryptophan synthase alpha chain OS=Idiomarina loihiensis GN=trpA PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 6.482e-15 Identity = 44/121 (36.36%), Postives = 68/121 (56.20%), Query Frame = 2 Query: 44 KIRLSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGE-AQSPEEGLKELEKFAKSLKSA 403 +I + V P + I + G+VYL+S GVTGA + L+ ++KE+ P +GFGIS+PEHVQ+ GADG I GSA+V L+ + + + + +L+ F KS+K+A Sbjct: 145 EIGIEAVFIAPPDASDALLIDIAKQCAGYVYLLSRSGVTGADTQMQAPASELINKLKEAGAPPTLLGFGISQPEHVQRALAAGADGAISGSAVVALIEKNLDNNAQQVADLKAFVKSMKAA 265
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_HELPJ (Tryptophan synthase alpha chain OS=Helicobacter pylori J99 GN=trpA PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 6.482e-15 Identity = 36/109 (33.03%), Postives = 64/109 (58.72%), Query Frame = 2 Query: 44 KIRLSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKE 370 K ++ + +P + ++ + S+G++Y ++ GVTGA ++ +++ +K S+ P +GFGISK EH+ G GADGVI GSA+VK++ E + E+ + E Sbjct: 143 KHQIKQIFIASPNASSKDLEQVATHSQGYIYTLARSGVTGASHTLENDASAIIKTLKTFSSTPALLGFGISKKEHITNAKGMGADGVICGSALVKIIEENLNNEDAMLE 251
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_FRATW (Tryptophan synthase alpha chain OS=Francisella tularensis subsp. tularensis (strain WY96-3418) GN=trpA PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 6.482e-15 Identity = 43/121 (35.54%), Postives = 67/121 (55.37%), Query Frame = 2 Query: 44 KIRLSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLL-GEAQSPEEGLKELEKFAKSLKSA 403 K+ ++ + P +K I E G+ YL+S +GVTG + + V+ +L +++E + +GFGISKPE VQQ GA G I GSA VK++ + ++ L EL F K +K+A Sbjct: 146 KVSIAQIFIAPPDASESTLKQISELGSGYTYLLSRVGVTGTETAANMPVEDVLTKLREYNAPKPVLGFGISKPEQVQQAIKAGAAGAISGSATVKIIQNNISNKQKMLNELTYFVKEMKAA 266
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_RHOS5 (Tryptophan synthase alpha chain OS=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) GN=trpA PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 8.465e-15 Identity = 45/117 (38.46%), Postives = 68/117 (58.12%), Query Frame = 2 Query: 53 LSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSLKSA 403 L+ + TPTT R+ +++ + GFVY VS G+TGA A+ + V + +K ++ PV VGFGI+ PE + +AG ADG +VGSA+VKL+ E + E L + A +A Sbjct: 148 LNFIRLATPTTDDRRLPKVLQNTSGFVYYVSITGITGAAAAQAVDVAPEVARLKAATDLPVIVGFGITSPEAARDIAG-VADGCVVGSAIVKLVAEGRPVAEVLDRVAALAAGAHAA 263
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_HALVO (Tryptophan synthase alpha chain OS=Halobacterium volcanii GN=trpA PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 8.465e-15 Identity = 44/119 (36.97%), Postives = 67/119 (56.30%), Query Frame = 2 Query: 53 LSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGE----AQSPEEGLKELEKFAKSLK 397 L LV PTT +R+ I+E G+VY+ + +G TGA++S+S + L + + P AVGFGIS +H +++ GADG+IVGSA+V ++ E E LE A+ L+ Sbjct: 143 LDLVFIVAPTTRGERLDRIMEQVSGYVYVQARLGTTGAQSSVSDQTDSSLERLTDYDV-PKAVGFGISDGDHAERIVASGADGIIVGSALVDIVAEGHENGDDAETVADRLETLARELE 260
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_GEOSF (Tryptophan synthase alpha chain OS=Geobacter sp. (strain FRC-32) GN=trpA PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 8.465e-15 Identity = 45/118 (38.14%), Postives = 73/118 (61.86%), Query Frame = 2 Query: 53 LSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSLKSAL 406 L+++ TPT+ +R++ + GF+Y VS GVTGAR+S++ +V + +++I++ T PV VGFGIS P +A ADGV+VGSA+V+ E S +E +L +LK+ + Sbjct: 147 LAVIFLLTPTSDEERIRKVAHLGSGFIYYVSVTGVTGARSSVAENVFSDVQKIRKRVTLPVVVGFGISDPAQAGSIAS-VADGVVVGSALVRQF-EQFSGKELHTKLSTMVSALKAGI 262
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_FRATT (Tryptophan synthase alpha chain OS=Francisella tularensis subsp. tularensis GN=trpA PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 8.465e-15 Identity = 43/121 (35.54%), Postives = 67/121 (55.37%), Query Frame = 2 Query: 44 KIRLSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLL-GEAQSPEEGLKELEKFAKSLKSA 403 K+ ++ + P +K I E G+ YL+S +GVTG + + V+ +L +++E + +GFGISKPE VQQ GA G I GSA VK++ + ++ L EL F K +K+A Sbjct: 146 KVGIAQIFIAPPDASESTLKQISELGSGYTYLLSRVGVTGTETAANMPVEDVLTKLREYNAPKPVLGFGISKPEQVQQAIKAGAAGAISGSATVKIIQNNISNKQKMLNELTYFVKEMKAA 266
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_FRATM (Tryptophan synthase alpha chain OS=Francisella tularensis subsp. mediasiatica (strain FSC147) GN=trpA PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 8.465e-15 Identity = 43/121 (35.54%), Postives = 67/121 (55.37%), Query Frame = 2 Query: 44 KIRLSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLL-GEAQSPEEGLKELEKFAKSLKSA 403 K+ ++ + P +K I E G+ YL+S +GVTG + + V+ +L +++E + +GFGISKPE VQQ GA G I GSA VK++ + ++ L EL F K +K+A Sbjct: 146 KVGIAQIFIAPPDASESTLKQISELGSGYTYLLSRVGVTGTETAANMPVEDVLAKLREYNAPKPVLGFGISKPEQVQQAIKAGAAGAISGSATVKIIQNNISNKQKMLNELTYFVKEMKAA 266
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_FRAT1 (Tryptophan synthase alpha chain OS=Francisella tularensis subsp. tularensis (strain FSC 198) GN=trpA PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 8.465e-15 Identity = 43/121 (35.54%), Postives = 67/121 (55.37%), Query Frame = 2 Query: 44 KIRLSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLL-GEAQSPEEGLKELEKFAKSLKSA 403 K+ ++ + P +K I E G+ YL+S +GVTG + + V+ +L +++E + +GFGISKPE VQQ GA G I GSA VK++ + ++ L EL F K +K+A Sbjct: 146 KVGIAQIFIAPPDASESTLKQISELGSGYTYLLSRVGVTGTETAANMPVEDVLTKLREYNAPKPVLGFGISKPEQVQQAIKAGAAGAISGSATVKIIQNNISNKQKMLNELTYFVKEMKAA 266 The following BLAST results are available for this feature:
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 363
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623328 ID=BQ623328; Name=BQ623328; organism=Citrus sinensis; type=EST; length=575bpback to top |