BQ623328
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_GEOTN (Tryptophan synthase alpha chain OS=Geobacillus thermodenitrificans (strain NG80-2) GN=trpA PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.106e-14 Identity = 53/131 (40.46%), Postives = 74/131 (56.49%), Query Frame = 2 Query: 53 LSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMV----KLLGEAQSPEEGLKELEKFAKSLKS-ALP*EQ*CRS 430 L L+ PT+ R++ I A++GF+Y VSS+GVTG R ++ + L E+K S PV VGFGIS PE V + DGV+VGSA+V +LL Q+ EE + +FA +S A P + C S Sbjct: 139 LPLISLVAPTSK-QRIEQIASAAQGFLYCVSSLGVTGVRETLPESLGHFLGEVKRHSRVPVVVGFGISTPEQVAMLKD-ACDGVVVGSALVQKIEQLLERLQTLEEKNAAIAEFASYARSLAAPLREPCSS 267
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_GEOSW (Tryptophan synthase alpha chain OS=Geobacillus sp. (strain WCH70) GN=trpA PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.106e-14 Identity = 47/125 (37.60%), Postives = 71/125 (56.80%), Query Frame = 2 Query: 53 LSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVK-------LLGEAQSPEEGLKELEKFAKSLKSAL 406 + L+ PT+ R++ I ++GF+Y VSS+GVTG R ++ + L E+K S PV VGFGIS E V + + DGV++GSA+V+ LL + EE L E ++A+SL + L Sbjct: 140 IPLISLVAPTSKK-RIEMIASNAQGFLYCVSSLGVTGVRDTLPETLNDFLTEVKRHSRVPVVVGFGISTSEQVSMLKNY-CDGVVIGSALVQKIEQLNDLLQTEEKKEEALAEFRRYARSLTAPL 262
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_VIBCM (Tryptophan synthase alpha chain OS=Vibrio cholerae serotype O1 (strain M66-2) GN=trpA PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.444e-14 Identity = 41/121 (33.88%), Postives = 66/121 (54.55%), Query Frame = 2 Query: 44 KIRLSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLL-GEAQSPEEGLKELEKFAKSLKSA 403 K + + PT + ++A+ + +G+ YL+S GVTGA + V LL +++ P +GFGIS+P V+Q GA G I GSA+VK++ +P + L EL F +++K A Sbjct: 145 KFGIQPIFIAPPTASDETLRAVAQLGKGYTYLLSRAGVTGAETKANMPVHALLERLQQFDAPPALLGFGISEPAQVKQAIEAGAAGAISGSAVVKIIETHLDNPAKQLTELANFTQAMKKA 265
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_VIBCH (Tryptophan synthase alpha chain OS=Vibrio cholerae GN=trpA PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.444e-14 Identity = 41/121 (33.88%), Postives = 66/121 (54.55%), Query Frame = 2 Query: 44 KIRLSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLL-GEAQSPEEGLKELEKFAKSLKSA 403 K + + PT + ++A+ + +G+ YL+S GVTGA + V LL +++ P +GFGIS+P V+Q GA G I GSA+VK++ +P + L EL F +++K A Sbjct: 145 KFGIQPIFIAPPTASDETLRAVAQLGKGYTYLLSRAGVTGAETKANMPVHALLERLQQFDAPPALLGFGISEPAQVKQAIEAGAAGAISGSAVVKIIETHLDNPAKQLTELANFTQAMKKA 265
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_VIBC3 (Tryptophan synthase alpha chain OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=trpA PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.444e-14 Identity = 41/121 (33.88%), Postives = 66/121 (54.55%), Query Frame = 2 Query: 44 KIRLSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLL-GEAQSPEEGLKELEKFAKSLKSA 403 K + + PT + ++A+ + +G+ YL+S GVTGA + V LL +++ P +GFGIS+P V+Q GA G I GSA+VK++ +P + L EL F +++K A Sbjct: 145 KFGIQPIFIAPPTASDETLRAVAQLGKGYTYLLSRAGVTGAETKANMPVHALLERLQQFDAPPALLGFGISEPAQVKQAIEAGAAGAISGSAVVKIIETHLDNPAKQLTELANFTQAMKKA 265
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_SPHWW (Tryptophan synthase alpha chain OS=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) GN=trpA PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.444e-14 Identity = 43/115 (37.39%), Postives = 67/115 (58.26%), Query Frame = 2 Query: 62 VLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSLKSAL 406 + TPTT R+ A++E + GF+Y VS G+TG + + ++ + K ++ PVAVGFG+ PE + + G ADGV+VGSA+V L+GE + G + F +L +AL Sbjct: 151 IRLATPTTDAARLPAVLEGASGFLYYVSVAGITGMQQAGQASIEAAVARFKAATDLPVAVGFGVRGPEQAEAI-GRVADGVVVGSAIVDLIGEHGAAAAG--PVRDFTATLSAAL 262
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_MYCLE (Tryptophan synthase alpha chain OS=Mycobacterium leprae GN=trpA PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.444e-14 Identity = 49/121 (40.50%), Postives = 66/121 (54.55%), Query Frame = 2 Query: 44 KIRLSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSLKSAL 406 K RL + P++ R+ V AS GFVY VS +GVTGAR ++S V L+ +K S V VG G+ E Q+ G+ ADGVIVGSA+V LG +GL L A+ L + + Sbjct: 151 KHRLDRIFLVAPSSTPHRLVTTVGASRGFVYAVSVMGVTGARDAVSQVVPELVARVKAVSDIAVGVGLGVRSREQAAQIGGY-ADGVIVGSALVSALG------DGLPRLRALAEELAAGV 264
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_MYCLB (Tryptophan synthase alpha chain OS=Mycobacterium leprae (strain Br4923) GN=trpA PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.444e-14 Identity = 49/121 (40.50%), Postives = 66/121 (54.55%), Query Frame = 2 Query: 44 KIRLSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSLKSAL 406 K RL + P++ R+ V AS GFVY VS +GVTGAR ++S V L+ +K S V VG G+ E Q+ G+ ADGVIVGSA+V LG +GL L A+ L + + Sbjct: 151 KHRLDRIFLVAPSSTPHRLVTTVGASRGFVYAVSVMGVTGARDAVSQVVPELVARVKAVSDIAVGVGLGVRSREQAAQIGGY-ADGVIVGSALVSALG------DGLPRLRALAEELAAGV 264
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_LEPBP (Tryptophan synthase alpha chain OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / ATCC 23582 / Paris) GN=trpA PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.444e-14 Identity = 38/96 (39.58%), Postives = 62/96 (64.58%), Query Frame = 2 Query: 53 LSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGE 340 + L+ TP + R++A+ + S GF+Y V+S GVTG R S ++ +R +K++ P+ GFGIS PE Q+AG+ ADG+I+GSA+ +++ E Sbjct: 148 MDLIHLVTPASTKKRIEALRKTSTGFIYYVTSFGVTGERREFSVDLKERIRFLKDTIQLPICAGFGISTPEQASQIAGY-ADGIIIGSAIQRVIEE 242
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_LEPBA (Tryptophan synthase alpha chain OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / Ames) GN=trpA PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.444e-14 Identity = 38/96 (39.58%), Postives = 62/96 (64.58%), Query Frame = 2 Query: 53 LSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGE 340 + L+ TP + R++A+ + S GF+Y V+S GVTG R S ++ +R +K++ P+ GFGIS PE Q+AG+ ADG+I+GSA+ +++ E Sbjct: 148 MDLIHLVTPASTKKRIEALRKTSTGFIYYVTSFGVTGERREFSVDLKERIRFLKDTIQLPICAGFGISTPEQASQIAGY-ADGIIIGSAIQRVIEE 242 The following BLAST results are available for this feature:
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 363
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623328 ID=BQ623328; Name=BQ623328; organism=Citrus sinensis; type=EST; length=575bpback to top |