BQ623328
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_HELPH (Tryptophan synthase alpha chain OS=Helicobacter pylori (strain HPAG1) GN=trpA PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.444e-14 Identity = 36/109 (33.03%), Postives = 62/109 (56.88%), Query Frame = 2 Query: 44 KIRLSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKE 370 K ++ + +P ++ + S+G++Y ++ GVTGA ++ +++ +K S+ P +GFGISK EH+ G GADGVI GSA+VK++ E + E + E Sbjct: 143 KHQIKQIFIASPNASVKDLEQVATHSQGYIYTLARSGVTGASHTLKNDASAIIKTLKTFSSTPALLGFGISKKEHITNAKGMGADGVICGSALVKIIEENLNNENAMLE 251
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_BACC3 (Tryptophan synthase alpha chain OS=Bacillus cereus (strain 03BB102) GN=trpA PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.444e-14 Identity = 40/101 (39.60%), Postives = 62/101 (61.39%), Query Frame = 2 Query: 53 LSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPE 355 ++L+ T T+P +R+K I+ SEGFVY V+ GVTG R + + + L ++K + PV GFGIS EHV+++ DGV+VGS +++LL + E Sbjct: 145 IALIPLVTVTSPIERIKKIMSESEGFVYAVTVAGVTGVRQNFKDEIHSYLEKVKSHTHLPVVAGFGISTKEHVEEMVTI-CDGVVVGSKVIELLENEKREE 244
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_BACAH (Tryptophan synthase alpha chain OS=Bacillus thuringiensis (strain Al Hakam) GN=trpA PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.444e-14 Identity = 40/101 (39.60%), Postives = 62/101 (61.39%), Query Frame = 2 Query: 53 LSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPE 355 ++L+ T T+P +R+K I+ SEGFVY V+ GVTG R + + + L ++K + PV GFGIS EHV+++ DGV+VGS +++LL + E Sbjct: 145 IALIPLVTVTSPIERIKKIMSESEGFVYAVTVAGVTGVRQNFKDEIHSYLEKVKSHTHLPVVAGFGISTKEHVEEMVTI-CDGVVVGSKVIELLENEKREE 244
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_THET8 (Tryptophan synthase alpha chain OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=trpA PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 1.886e-14 Identity = 48/119 (40.34%), Postives = 68/119 (57.14%), Query Frame = 2 Query: 44 KIRLSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSLKS 400 +I L V PT+ R+ +V + GFVY VS GVTG R + V+ L+R IK + PVAVGFG+S Q A ADGV+VGSA+V+ L E +S L+E+ + + L++ Sbjct: 142 EIGLETVFLLAPTSTDARIATVVRHATGFVYAVSVTGVTGMRERLPEEVKDLVRRIKARTALPVAVGFGVSGKATAAQAA--VADGVVVGSALVRALEEGRSLAPLLQEIRQGLQRLEA 258
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_THET2 (Tryptophan synthase alpha chain OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=trpA PE=1 SV=2) HSP 1 Score: 78.9518 bits (193), Expect = 1.886e-14 Identity = 48/119 (40.34%), Postives = 68/119 (57.14%), Query Frame = 2 Query: 44 KIRLSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSLKS 400 +I L V PT+ R+ +V + GFVY VS GVTG R + V+ L+R IK + PVAVGFG+S Q A ADGV+VGSA+V+ L E +S L+E+ + + L++ Sbjct: 142 EIGLETVFLLAPTSTDARIATVVRHATGFVYAVSVTGVTGMRERLPEEVKDLVRRIKARTALPVAVGFGVSGKATAAQAA--VADGVVVGSALVRALEEGRSLAPLLQEIRQGLQRLEA 258
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_ROSS1 (Tryptophan synthase alpha chain OS=Roseiflexus sp. (strain RS-1) GN=trpA PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 1.886e-14 Identity = 43/115 (37.39%), Postives = 66/115 (57.39%), Query Frame = 2 Query: 53 LSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSLK 397 L L+ F PTTP +R+ I + GF+Y V+ GVTGAR + + L ++ ++ P+ VGFGIS HV++ AG A G IV SA++ ++ +A P E + F +SL+ Sbjct: 148 LDLIFFVAPTTPDERIDRIAALASGFIYCVALTGVTGARRELWSGLPAFLERVRRRTSLPLVVGFGISSAAHVRE-AGRYAAGAIVASALINVIEQA-PPGEYVARAVDFVRSLR 260
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_OPITP (Tryptophan synthase alpha chain OS=Opitutus terrae (strain DSM 11246 / PB90-1) GN=trpA PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 1.886e-14 Identity = 46/112 (41.07%), Postives = 65/112 (58.04%), Query Frame = 2 Query: 62 VLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGE-AQSPEEGLKELEKFAKSL 394 V PT+P +R+ I +A+ GF+Y VS GVTG + ++ ++ + I+ + PV VGFGIS E V+QVA ADGV+VGSA+V + E SPE +L A L Sbjct: 150 VYIVAPTSPAERIAKIAQAATGFIYYVSREGVTGVQERVAANIPEAVAAIRRHTALPVVVGFGISNREQVRQVAA-VADGVVVGSALVNCIRENLGSPERITAKLAAVAGDL 260
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_BACHK (Tryptophan synthase alpha chain OS=Bacillus thuringiensis subsp. konkukian GN=trpA PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 1.886e-14 Identity = 40/101 (39.60%), Postives = 61/101 (60.40%), Query Frame = 2 Query: 53 LSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPE 355 ++L+ T T+P +R+K I SEGFVY V+ GVTG R + + + L ++K + PV GFGIS EHV+++ DGV+VGS +++LL + E Sbjct: 145 IALIPLVTVTSPIERIKKITSESEGFVYAVTVAGVTGVRQNFKDEIHSYLEKVKSHTHLPVVAGFGISTKEHVEEMVTI-CDGVVVGSKVIELLENEKREE 244
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_BACCZ (Tryptophan synthase alpha chain OS=Bacillus cereus (strain ZK / E33L) GN=trpA PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 1.886e-14 Identity = 40/101 (39.60%), Postives = 61/101 (60.40%), Query Frame = 2 Query: 53 LSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPE 355 ++L+ T T+P +R+K I SEGFVY V+ GVTG R + + + L ++K + PV GFGIS EHV+++ DGV+VGS +++LL + E Sbjct: 145 IALIPLVTVTSPIERIKKITSESEGFVYAVTVAGVTGVRQNFKDEIHSYLEKVKSHTHLPVVAGFGISTKEHVEEMVTI-CDGVVVGSKVIELLENEKREE 244
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_BACC0 (Tryptophan synthase alpha chain OS=Bacillus cereus (strain AH820) GN=trpA PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 1.886e-14 Identity = 40/101 (39.60%), Postives = 61/101 (60.40%), Query Frame = 2 Query: 53 LSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPE 355 ++L+ T T+P +R+K I SEGFVY V+ GVTG R + + + L ++K + PV GFGIS EHV+++ DGV+VGS +++LL + E Sbjct: 145 IALIPLVTVTSPIERIKKITSESEGFVYAVTVAGVTGVRQNFKDEIHSYLEKVKSHTHLPVVAGFGISTKEHVEEMVTI-CDGVVVGSKVIELLENEKREE 244 The following BLAST results are available for this feature:
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 363
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >BQ623328 ID=BQ623328; Name=BQ623328; organism=Citrus sinensis; type=EST; length=575bpback to top |