BQ623328
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_BACC2 (Tryptophan synthase alpha chain OS=Bacillus cereus (strain G9842) GN=trpA PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.085e-13 Identity = 39/101 (38.61%), Postives = 60/101 (59.41%), Query Frame = 2 Query: 53 LSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPE 355 ++L+ T T+P +R++ I SEGFVY V+ GVTG R + + + L ++K PV GFGIS EHV+++ DGV+VGS +++LL + E Sbjct: 145 IALIPLVTVTSPIERIEKITSESEGFVYAVTVAGVTGVRQNFKEEIHSYLEKVKLHVNLPVVAGFGISTKEHVEEMVTI-CDGVVVGSKIIELLENEKREE 244
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_TOLAT (Tryptophan synthase alpha chain OS=Tolumonas auensis (strain DSM 9187 / TA4) GN=trpA PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 2.723e-13 Identity = 42/115 (36.52%), Postives = 59/115 (51.30%), Query Frame = 2 Query: 62 VLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLL-GEAQSPEEGLKELEKFAKSLKSA 403 + P + +K + S G+ YL+S GVTGA V LL +KE P +GFGIS+PE V+ GA G I GSA+VK++ P L +L +F K +K+A Sbjct: 151 IYIAPPNADDETLKTVARLSSGYTYLLSRAGVTGAETRAQMPVDHLLTALKEFGAPPALLGFGISEPEQVKAAITAGAAGAISGSAVVKIIEHNLNEPAVMLDKLTQFVKKMKAA 265
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_RHOP5 (Tryptophan synthase alpha chain OS=Rhodopseudomonas palustris (strain BisA53) GN=trpA PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 2.723e-13 Identity = 41/104 (39.42%), Postives = 59/104 (56.73%), Query Frame = 2 Query: 44 KIRLSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPE 355 K L+ + TPTT R+ A++ + GFVY VS G+TGA ++ + V + IK + PV VGFGI PE + +A ADG +VGSA+V +L + E Sbjct: 146 KAGLNFIRLATPTTDDKRLPAVLANTSGFVYYVSVTGITGAASADASAVSAAVTRIKRHTPLPVCVGFGIRTPEGARDIAR-HADGAVVGSALVDVLSRSLDAE 248
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_AZOC5 (Tryptophan synthase alpha chain OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=trpA PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 2.723e-13 Identity = 39/92 (42.39%), Postives = 55/92 (59.78%), Query Frame = 2 Query: 53 LSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVK 328 L + TPTT R+ A++ + GFVY VS G+TG+ + V + IK+ +T PVAVGFG+ P +A GADGV+VGSA+V+ Sbjct: 149 LDFIRLATPTTDEKRLPAVLAHTAGFVYYVSITGITGSATPDANAVAGAVARIKQHTTLPVAVGFGVKTPAQAAAIAA-GADGVVVGSALVE 239
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_MYCUA (Tryptophan synthase alpha chain OS=Mycobacterium ulcerans (strain Agy99) GN=trpA PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 3.557e-13 Identity = 44/118 (37.29%), Postives = 63/118 (53.39%), Query Frame = 2 Query: 53 LSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSLKSAL 406 L + P++ +R+ V AS GFVY S++GVTGAR ++S L+ +K S PV VG G+ E ++ G ADGVIVGSA+V LG +GL L + L + + Sbjct: 153 LDRIFLVAPSSTPERLANTVAASRGFVYAASTMGVTGARDAVSNAAPDLVARVKAVSDIPVGVGLGVRSREQAAEI-GRYADGVIVGSALVSALG------DGLPSLRSLTEELAAGV 263
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_MYCMM (Tryptophan synthase alpha chain OS=Mycobacterium marinum (strain ATCC BAA-535 / M) GN=trpA PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 3.557e-13 Identity = 44/118 (37.29%), Postives = 63/118 (53.39%), Query Frame = 2 Query: 53 LSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSLKSAL 406 L + P++ +R+ V AS GFVY S++GVTGAR ++S L+ +K S PV VG G+ E ++ G ADGVIVGSA+V LG +GL L + L + + Sbjct: 153 LDRIFLVAPSSTPERLANTVAASRGFVYAASTMGVTGARDAVSNAAPDLVARVKAVSDIPVGVGLGVRSREQAAEI-GRYADGVIVGSALVSALG------DGLPSLRSLTEELAAGV 263
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_HALSA (Tryptophan synthase alpha chain OS=Halobacterium salinarium GN=trpA PE=3 SV=2) HSP 1 Score: 74.7146 bits (182), Expect = 3.557e-13 Identity = 38/102 (37.25%), Postives = 58/102 (56.86%), Query Frame = 2 Query: 53 LSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEE 358 L LV PTT DR + +++ + GFVY+ +G TGAR +S L ++ + P AVGFG+S E +++ GADGVIVGSA V + + + ++ Sbjct: 146 LDLVFVVAPTTTADRRERMLDLTTGFVYVQGRVGTTGAREEVSAATPDALAALQHTDI-PKAVGFGVSSGEQAREITASGADGVIVGSAYVDTVADGVADDD 246
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_HALS3 (Tryptophan synthase alpha chain OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=trpA PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 3.557e-13 Identity = 38/102 (37.25%), Postives = 58/102 (56.86%), Query Frame = 2 Query: 53 LSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEE 358 L LV PTT DR + +++ + GFVY+ +G TGAR +S L ++ + P AVGFG+S E +++ GADGVIVGSA V + + + ++ Sbjct: 146 LDLVFVVAPTTTADRRERMLDLTTGFVYVQGRVGTTGAREEVSAATPDALAALQHTDI-PKAVGFGVSSGEQAREITASGADGVIVGSAYVDTVADGVADDD 246
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_DESOH (Tryptophan synthase alpha chain OS=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) GN=trpA PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 3.557e-13 Identity = 37/96 (38.54%), Postives = 60/96 (62.50%), Query Frame = 2 Query: 56 SLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEA 343 +L+ PTTP R+ AI ++ GF+YLVS GVTG+ + H+ L +++ + P+ VGFG+S + V ++A ADGV++GSA +L+ E+ Sbjct: 148 ALIRLLAPTTPDGRIGAIAASASGFLYLVSMTGVTGSSGLDTTHIADLCAKVQRHTALPICVGFGVSTADDVAKIA-QHADGVVIGSAFERLIEES 242
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_CAMJD (Tryptophan synthase alpha chain OS=Campylobacter jejuni subsp. doylei (strain ATCC BAA-1458 / RM4099 / 269.97) GN=trpA PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 3.557e-13 Identity = 39/115 (33.91%), Postives = 76/115 (66.09%), Query Frame = 2 Query: 44 KIRLSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAK 388 K ++L+ + TTP +R+K +V+ ++GF+YL++SIG+TG ++ +Q ++EI+ + P+ VGFGI + V+++ ADGVIVG+++VK + ++ + +K++E+ K Sbjct: 136 KYNIALITLVSVTTPKERVKKLVKHAKGFIYLLASIGITGTKSVEEAILQDKVKEIRSFTNLPIFVGFGIQNNQDVKRMRK-VADGVIVGTSIVKYF-KQENLDIIMKDIEEIFK 248 The following BLAST results are available for this feature:
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 363
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623328 ID=BQ623328; Name=BQ623328; organism=Citrus sinensis; type=EST; length=575bpback to top |