BQ623328
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_SYNP6 (Tryptophan synthase alpha chain OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=trpA PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 3.548e-21 Identity = 52/118 (44.07%), Postives = 73/118 (61.86%), Query Frame = 2 Query: 53 LSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSLKSAL 406 + L+L PT+ DR+ AI + + GF+YLVS GVTG R + V LL+EI++ + KP+ VGFGIS E +QV WGADGVIVGSA V L E+G++ + + L+ A+ Sbjct: 147 IDLILLIAPTSSADRIAAISKQARGFIYLVSVTGVTGMRQGMQSRVADLLQEIRQGTDKPIGVGFGISGAEQARQVRDWGADGVIVGSAFVNRL-----QEQGVEGVATLCRELRQAI 259
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_SYNE7 (Tryptophan synthase alpha chain OS=Synechococcus elongatus (strain PCC 7942) GN=trpA PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 3.548e-21 Identity = 52/118 (44.07%), Postives = 73/118 (61.86%), Query Frame = 2 Query: 53 LSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSLKSAL 406 + L+L PT+ DR+ AI + + GF+YLVS GVTG R + V LL+EI++ + KP+ VGFGIS E +QV WGADGVIVGSA V L E+G++ + + L+ A+ Sbjct: 147 IDLILLIAPTSSADRIAAISKQARGFIYLVSVTGVTGMRQGMQSRVADLLQEIRQGTDKPIGVGFGISGAEQARQVRDWGADGVIVGSAFVNRL-----QEQGVEGVATLCRELRQAI 259
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_PORPU (Tryptophan synthase alpha chain OS=Porphyra purpurea GN=trpA PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 6.052e-21 Identity = 45/118 (38.14%), Postives = 78/118 (66.10%), Query Frame = 2 Query: 53 LSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSLKSAL 406 + L+ +PT+ +R+ IVE + G +YLVS+ GVTG + ++G ++ L IK+ + KP+ +GFGIS E ++++ GW +G+++GSA VK L + PEEGL++++ F + KS + Sbjct: 155 IELIFLLSPTSSIERINKIVEQAPGCIYLVSTTGVTGQKPELTGKLKRLTETIKKMTQKPIILGFGISTAEQIKEIKGWNINGIVIGSAFVKRL-SSDFPEEGLRKIKDFCTTAKSII 271
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_METTM (Tryptophan synthase alpha chain OS=Methanobacterium thermoautotrophicum (strain Marburg / DSM 2133) GN=trpA PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 3.004e-20 Identity = 50/115 (43.48%), Postives = 73/115 (63.48%), Query Frame = 2 Query: 62 VLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGE-AQSPEEGLKELEKFAKSLKSA 403 + PTT R+K I E S GF YLVS +GVTGAR+ + L+ +K + + PV VGFG+S+PEHV+ +A GADGVIVGSA++ L+ + E L+E+ + + +K+A Sbjct: 146 IFIVAPTTDNQRLKMISEVSSGFHYLVSVMGVTGARSRVEESTLELIERVKGAGSLPVMVGFGVSQPEHVRMLADAGADGVIVGSAIIDLISKNLDDRERMLQEIYEMVRKMKTA 260
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_METTH (Tryptophan synthase alpha chain OS=Methanobacterium thermoautotrophicum GN=trpA PE=3 SV=2) HSP 1 Score: 97.4413 bits (241), Expect = 5.124e-20 Identity = 51/121 (42.15%), Postives = 76/121 (62.81%), Query Frame = 2 Query: 44 KIRLSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLL-GEAQSPEEGLKELEKFAKSLKSA 403 K + + PTT ++R+K I E S GF YLVS +GVTGAR+ + L++ +K + PV VGFG+S+PEHV+ + GADGVIVGSA++ ++ G E L+ + + A +LK+A Sbjct: 146 KYDIDQIFIVAPTTGSERLKRISEVSSGFHYLVSVMGVTGARSRVEDATIELIKRVKAEGSLPVMVGFGVSRPEHVRMLRDAGADGVIVGSAIIDVISGNLGDRELMLQRIHEMAGTLKAA 266
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_ANTSP (Tryptophan synthase alpha chain OS=Antithamnion sp. GN=trpA PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 1.491e-19 Identity = 52/118 (44.07%), Postives = 71/118 (60.17%), Query Frame = 2 Query: 50 RLSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSLKSA 403 ++ LVLF PT+ R+ +I + S G +YLVSS GVTG R I V L IK+ S K + +GFGIS PEH++++ W DGV+VGSA VK L A ++ + + KSLK A Sbjct: 144 QIELVLFVAPTSSMKRINSISKKSPGCIYLVSSTGVTGVRDDIDIKVMELSNYIKKVSNKFIMLGFGISTPEHIKKIMKWNIDGVVVGSAFVKKL-SALKIDDRISSISSLCKSLKKA 260
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_BACSK (Tryptophan synthase alpha chain OS=Bacillus clausii (strain KSM-K16) GN=trpA PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 1.947e-19 Identity = 53/126 (42.06%), Postives = 82/126 (65.08%), Query Frame = 2 Query: 53 LSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLG-------EAQSPEEGLKELEKFAKSLKSALP 409 L+L+ PT+ R+KAI ++GF+Y VSS+GVTGAR ++ V+ L+ +KE+S P VGFGIS E V+++ G ADGV++GSA+V+ +G +A+S +E +KE+E++ SL P Sbjct: 144 LALISLVAPTSQ-QRIKAIASRAQGFLYCVSSLGVTGARKTLHPQVEAFLKLVKEASPVPFVVGFGISSYEQVEEM-GRHADGVVIGSAIVEQIGLRCEALKQAESRDEAVKEIEQYVNSLLHPAP 267
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_PORYE (Tryptophan synthase alpha chain OS=Porphyra yezoensis GN=trpA PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 5.665e-19 Identity = 40/118 (33.90%), Postives = 75/118 (63.56%), Query Frame = 2 Query: 53 LSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSLKSAL 406 + L+L PT+ +R+ I++ + G +YLVS+ GVTG ++ ++ ++ L +K + K + +GFGIS E ++++ GW +G+++GSA VK L PE GL++++ F + K+A+ Sbjct: 145 IELILLLAPTSSRERISKIIKRAPGCIYLVSTTGVTGQKSQLTSQLKELTETVKTMTNKSIILGFGISTTEQIKEIKGWNINGIVIGSAFVKRL-SGNVPEAGLEQIQSFCQDAKNAI 261
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_ARCFU (Tryptophan synthase alpha chain OS=Archaeoglobus fulgidus GN=trpA PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 7.399e-19 Identity = 53/115 (46.09%), Postives = 71/115 (61.74%), Query Frame = 2 Query: 62 VLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSLKSAL 406 V P TP DR++A+ E S FVYLVS+ GVTG R IS L+ K KPVAVGFG+SK +HV+Q+ GADGV+VGSA V+L+ E E +++ ++L+S L Sbjct: 136 VFLAAPNTPEDRLRAMDELS-AFVYLVSTYGVTGERDRISPLAFEALKRAKGICRKPVAVGFGVSKADHVRQLISAGADGVVVGSAFVRLINE--KGERATEDIRALTENLRSGL 247
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_GRATL (Tryptophan synthase alpha chain OS=Gracilaria tenuistipitata var. liui GN=trpA PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 9.663e-19 Identity = 46/119 (38.66%), Postives = 72/119 (60.50%), Query Frame = 2 Query: 53 LSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMV-KLLGEAQSPEEGLKELEKFAKSLKSAL 406 + L+LF PT+ R++ I S G +YLVSS GVTG R + +Q L IK ++ K + +GFGI+ P+ + Q+ W DG++VGSA++ ++GE P++ L L F K LK ++ Sbjct: 145 IELILFVAPTSSQSRIQLIASKSPGCIYLVSSCGVTGLRDNFDVKIQHLANNIKSTTNKLIMLGFGINNPDQISQIINWNIDGIVVGSAIITHIVGEL--PQDMLNSLAHFCKKLKYSI 261 The following BLAST results are available for this feature:
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 363
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623328 ID=BQ623328; Name=BQ623328; organism=Citrus sinensis; type=EST; length=575bpback to top |