BQ623328
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_RHOP2 (Tryptophan synthase alpha chain OS=Rhodopseudomonas palustris (strain HaA2) GN=trpA PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 5.136e-12 Identity = 39/97 (40.21%), Postives = 56/97 (57.73%), Query Frame = 2 Query: 44 KIRLSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLL 334 K L+ + TPTT R+ A++ + GFVY VS G+TG+ ++ S V + IK + PV VGFGI PE + +A ADG +VGSA++ L Sbjct: 146 KAGLNFIRLATPTTDEKRLPAVLANTSGFVYYVSITGITGSASADSVAVGDAVARIKRHTDLPVCVGFGIRTPEGARAIAA-QADGAVVGSALIDAL 241
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_NITWN (Tryptophan synthase alpha chain OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=trpA PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 5.136e-12 Identity = 40/104 (38.46%), Postives = 59/104 (56.73%), Query Frame = 2 Query: 44 KIRLSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPE 355 K L+ + TPTT R+ A++ + GFVY VS G+TG+ A+ S V + IK ++ PV VGFGI P+ + +A +DG +VGSA+V L + E Sbjct: 146 KAGLNFIRLATPTTDDKRLPAVLANTSGFVYYVSITGITGSAAADSTAVGAAVGRIKRHTSLPVCVGFGIRTPDAARGIAE-RSDGAVVGSALVDALSASLDAE 248
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_HAEIN (Tryptophan synthase alpha chain OS=Haemophilus influenzae GN=trpA PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 5.136e-12 Identity = 39/116 (33.62%), Postives = 65/116 (56.03%), Query Frame = 2 Query: 62 VLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASI-SGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLL-GEAQSPEEGLKELEKFAKSLKSA 403 V P ++ + + SEG+ YLVS GVT A + ++ TL+ ++K + P+ GFGI++PE V++ G G I GSA VK++ + E+ L EL +F +++K+A Sbjct: 151 VFICPPNADEKTIQGVAKNSEGYTYLVSRAGVTSAENQAHAANLDTLVEKLKAHNAPPILQGFGIAQPEQVKEALSLGTAGAISGSATVKIIERNLDNHEQCLAELAEFVQTMKAA 266
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_ACTP7 (Tryptophan synthase alpha chain OS=Actinobacillus pleuropneumoniae serotype 7 (strain AP76) GN=trpA PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 5.136e-12 Identity = 41/116 (35.34%), Postives = 61/116 (52.59%), Query Frame = 2 Query: 62 VLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISG-HVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLL-GEAQSPEEGLKELEKFAKSLKSA 403 V P ++ I +EG+ YLVS GVT A ++ L+ +K S++ P+ GFGI+KP V++ G DG I GSA+VK++ S + L EL KF +K+A Sbjct: 151 VFICPPNADQVTIERIANLTEGYTYLVSRSGVTSAENQAHAKNLDNLIESLKRSNSAPILQGFGIAKPAQVKEALALGCDGAISGSAIVKIIERNLDSQTQLLSELAKFVSVMKAA 266
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_XANCB (Tryptophan synthase alpha chain OS=Xanthomonas campestris pv. campestris (strain B100) GN=trpA PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 6.707e-12 Identity = 41/122 (33.61%), Postives = 65/122 (53.28%), Query Frame = 2 Query: 44 KIRLSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQT-LLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSLKSAL 406 ++ L+L+ +PTT R+ + ++G++Y VS GVTGA + H + LR+++ + PV GFGI +A ADGV+VGSA+V L +A + E F + L+ AL Sbjct: 149 EVGLALIALASPTTGEARLDMLCSTAQGYLYYVSFSGVTGAADRLDTHAASDRLRQLRARAGAPVVAGFGIKDAASAAAMA-VDADGVVVGSALVAALADASDVRSARERAEDFLQPLRQAL 269
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_THICR (Tryptophan synthase alpha chain OS=Thiomicrospira crunogena (strain XCL-2) GN=trpA PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 6.707e-12 Identity = 39/105 (37.14%), Postives = 59/105 (56.19%), Query Frame = 2 Query: 50 RLSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGL 364 +L + +PTTP R+ A+ E GFVY VS GVTG++A V + ++E + PVA+GFGI ++A G D +IVGSA+V L+ + S + + Sbjct: 147 QLDRIFLVSPTTPDGRLNAVSEKGSGFVYYVSLKGVTGSKALDVDDVAQHVGHLREKMSMPVAIGFGIRDGNTAYEMAKLG-DAIIVGSALVSLIEQNASEDSAV 250
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_RHIE6 (Tryptophan synthase alpha chain OS=Rhizobium etli (strain CIAT 652) GN=trpA PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 6.707e-12 Identity = 36/91 (39.56%), Postives = 55/91 (60.44%), Query Frame = 2 Query: 53 LSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMV 325 ++ + TPTT R+ A+++ + GFVY VS G+TG+ V ++ IK+ + PV VGFG+ EH +V G ADGV+VG+A+V Sbjct: 149 INFIRLATPTTDEKRLPAVLKNTSGFVYYVSMNGITGSALPDPSLVSGAVQRIKQHTELPVCVGFGVKTAEHA-KVIGGSADGVVVGTAIV 238
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_METRJ (Tryptophan synthase alpha chain OS=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) GN=trpA PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 6.707e-12 Identity = 38/94 (40.43%), Postives = 52/94 (55.32%), Query Frame = 2 Query: 53 LSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLL 334 L+ + TPTT R+ A++ + GFVY VS G+TG G V + I+ + PV VGFG+ H +A GADGV+VGSA+V L Sbjct: 149 LAFIRLATPTTDERRLPAVLANTAGFVYYVSITGITGTATPDFGKVSEAVARIRRHTDLPVVVGFGVKTGAHAAAIAK-GADGVVVGSALVDAL 241
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_KLEP7 (Tryptophan synthase alpha chain OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=trpA PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 6.707e-12 Identity = 42/127 (33.07%), Postives = 64/127 (50.39%), Query Frame = 2 Query: 26 YRRKP*KIRLSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLL-GEAQSPEEGLKELEKFAKSLKSA 403 +R+ + ++ + P D ++ I G+ YL+S GVTGA + + L+ ++ E P GFGIS PE V GA G I GSA+VK++ P+ L EL+ F +SLK+A Sbjct: 139 FRQAAMRHNIAPIFICPPNADDDLLRQIASYGRGYTYLLSRAGVTGAENRAALPLHHLVEKLAEYHAAPPLQGFGISAPEQVSAAIDAGAAGAISGSAIVKIIERHLDEPQTMLDELKAFVQSLKAA 265
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_KLEP3 (Tryptophan synthase alpha chain OS=Klebsiella pneumoniae (strain 342) GN=trpA PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 6.707e-12 Identity = 42/127 (33.07%), Postives = 64/127 (50.39%), Query Frame = 2 Query: 26 YRRKP*KIRLSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLL-GEAQSPEEGLKELEKFAKSLKSA 403 +R+ + ++ + P D ++ I G+ YL+S GVTGA + + L+ ++ E P GFGIS PE V GA G I GSA+VK++ P+ L EL+ F +SLK+A Sbjct: 139 FRQAAMRHNIAPIFICPPNADDDLLRQIASYGRGYTYLLSRAGVTGAENRAALPLHHLVEKLAEYHAAPPLQGFGISAPEQVSAAIDAGAAGAISGSAIVKIIERHLDEPQTMLDELKAFVQSLKAA 265 The following BLAST results are available for this feature:
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 363
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623328 ID=BQ623328; Name=BQ623328; organism=Citrus sinensis; type=EST; length=575bpback to top |