BQ623328
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_ECOLC (Tryptophan synthase alpha chain OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=trpA PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.494e-11 Identity = 40/127 (31.50%), Postives = 67/127 (52.76%), Query Frame = 2 Query: 26 YRRKP*KIRLSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGE-AQSPEEGLKELEKFAKSLKSA 403 +R+ + ++ + P D ++ I G+ YL+S GVTGA + + L+ ++KE + P GFGIS P+ V+ GA G I GSA+VK++ + PE+ L L+ F + +K+A Sbjct: 139 FRQAALRHNVAPIFICPPNADDDLLRQIASYGRGYTYLLSRAGVTGAENRAALPLNHLVAKLKEYNAAPPLQGFGISAPDQVKAAIDAGAAGAISGSAIVKIIEQHINEPEKMLAALKVFVQPMKAA 265
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_ECOHS (Tryptophan synthase alpha chain OS=Escherichia coli O9:H4 (strain HS) GN=trpA PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.494e-11 Identity = 40/127 (31.50%), Postives = 67/127 (52.76%), Query Frame = 2 Query: 26 YRRKP*KIRLSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGE-AQSPEEGLKELEKFAKSLKSA 403 +R+ + ++ + P D ++ I G+ YL+S GVTGA + + L+ ++KE + P GFGIS P+ V+ GA G I GSA+VK++ + PE+ L L+ F + +K+A Sbjct: 139 FRQAALRHNVAPIFICPPNADDDLLRQIASYGRGYTYLLSRAGVTGAENRAALPLNHLVAKLKEYNAAPPLQGFGISAPDQVKAAIDAGAAGAISGSAIVKIIEQHINEPEKMLAALKVFVQPMKAA 265
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_ECODH (Tryptophan synthase alpha chain OS=Escherichia coli (strain K12 / DH10B) GN=trpA PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.494e-11 Identity = 40/127 (31.50%), Postives = 67/127 (52.76%), Query Frame = 2 Query: 26 YRRKP*KIRLSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGE-AQSPEEGLKELEKFAKSLKSA 403 +R+ + ++ + P D ++ I G+ YL+S GVTGA + + L+ ++KE + P GFGIS P+ V+ GA G I GSA+VK++ + PE+ L L+ F + +K+A Sbjct: 139 FRQAALRHNVAPIFICPPNADDDLLRQIASYGRGYTYLLSRAGVTGAENRAALPLNHLVAKLKEYNAAPPLQGFGISAPDQVKAAIDAGAAGAISGSAIVKIIEQHINEPEKMLAALKVFVQPMKAA 265
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_ECOBW (Tryptophan synthase alpha chain OS=Escherichia coli (strain K12 / BW2952) GN=trpA PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.494e-11 Identity = 40/127 (31.50%), Postives = 67/127 (52.76%), Query Frame = 2 Query: 26 YRRKP*KIRLSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGE-AQSPEEGLKELEKFAKSLKSA 403 +R+ + ++ + P D ++ I G+ YL+S GVTGA + + L+ ++KE + P GFGIS P+ V+ GA G I GSA+VK++ + PE+ L L+ F + +K+A Sbjct: 139 FRQAALRHNVAPIFICPPNADDDLLRQIASYGRGYTYLLSRAGVTGAENRAALPLNHLVAKLKEYNAAPPLQGFGISAPDQVKAAIDAGAAGAISGSAIVKIIEQHINEPEKMLAALKVFVQPMKAA 265
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_ECO8A (Tryptophan synthase alpha chain OS=Escherichia coli O8 (strain IAI1) GN=trpA PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.494e-11 Identity = 40/127 (31.50%), Postives = 67/127 (52.76%), Query Frame = 2 Query: 26 YRRKP*KIRLSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGE-AQSPEEGLKELEKFAKSLKSA 403 +R+ + ++ + P D ++ I G+ YL+S GVTGA + + L+ ++KE + P GFGIS P+ V+ GA G I GSA+VK++ + PE+ L L+ F + +K+A Sbjct: 139 FRQAALRHNVAPIFICPPNADDDLLRQIASYGRGYTYLLSRAGVTGAENRAALPLNHLVAKLKEYNAAPPLQGFGISAPDQVKAAIDAGAAGAISGSAIVKIIEQHINEPEKMLAALKVFVQPMKAA 265
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_BACFR (Tryptophan synthase alpha chain OS=Bacteroides fragilis GN=trpA PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.494e-11 Identity = 38/109 (34.86%), Postives = 64/109 (58.72%), Query Frame = 2 Query: 53 LSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTK-PVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELE 376 + +++ TP T +R++ I E ++GF+Y+VSS TGA+ G + ++I++ + + P VGFGIS E + A A G I+GS V LL E ++PE+ + L+ Sbjct: 145 VKVIMLITPETSEERVREIDEHTDGFIYMVSSAATTGAQQDFDGQKRAYFKKIEKMNLRNPRMVGFGISN-EATFRAACENASGAIIGSRFVTLLHEEKNPEKAITRLK 252
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_BACFN (Tryptophan synthase alpha chain OS=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) GN=trpA PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.494e-11 Identity = 38/109 (34.86%), Postives = 64/109 (58.72%), Query Frame = 2 Query: 53 LSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTK-PVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELE 376 + +++ TP T +R++ I E ++GF+Y+VSS TGA+ G + ++I++ + + P VGFGIS E + A A G I+GS V LL E ++PE+ + L+ Sbjct: 145 VKVIMLITPETSEERVREIDEHTDGFIYMVSSAATTGAQQDFDGQKRAYFKKIEKMNLRNPRMVGFGISN-EATFRAACENASGAIIGSRFVTLLHEEKNPEKAITRLK 252
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_SHIF8 (Tryptophan synthase alpha chain OS=Shigella flexneri serotype 5b (strain 8401) GN=trpA PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.952e-11 Identity = 39/115 (33.91%), Postives = 61/115 (53.04%), Query Frame = 2 Query: 62 VLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGE-AQSPEEGLKELEKFAKSLKSA 403 + P D ++ I G+ YL+S GVTGA + + L+ ++KE + P GFGIS P+ V+ GA G I GSA+VK++ + PE+ L L+ F + +K+A Sbjct: 151 IFICPPNADDDLLRQIASYGRGYTYLLSRAGVTGAENRAALPLNHLVAKLKEYNAAPPLQGFGISAPDQVKAAIDAGAAGAISGSAIVKIIEQHINEPEKMLAALKVFVQPMKAA 265
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_SALTO (Tryptophan synthase alpha chain OS=Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440) GN=trpA PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.952e-11 Identity = 40/118 (33.90%), Postives = 61/118 (51.69%), Query Frame = 2 Query: 53 LSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSLKSAL 406 L +P++ R+ VE GFVY + +GVTGARA S L+ ++ + PV VG GI E + + ADGVIVGSA+++ L +A + GL L + + L + + Sbjct: 146 LDRTFLVSPSSTDARLHMTVEQCRGFVYATTIMGVTGARAQASAAAPVLVSRVRAVTDLPVGVGLGIGTGEQASTASSF-ADGVIVGSALIRRLLDAPNLPAGLTALRELSAELAAGV 262
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_SALAI (Tryptophan synthase alpha chain OS=Salinispora arenicola (strain CNS-205) GN=trpA PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.952e-11 Identity = 41/118 (34.75%), Postives = 59/118 (50.00%), Query Frame = 2 Query: 53 LSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSLKSAL 406 L P++ R++ VE GFVY + +GVTGAR S L+ ++ + PV VG G VAG+ ADGVIVGSA+++ L +A S GL L + L + + Sbjct: 146 LDRTFLVAPSSTDTRLEMTVEHCRGFVYATALMGVTGARTQASAAAPVLVSRVRGVTDLPVGVGLGTGTGAQASTVAGF-ADGVIVGSALIRCLLDAPSLPAGLTALRALSAELAAGV 262 The following BLAST results are available for this feature:
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 363
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623328 ID=BQ623328; Name=BQ623328; organism=Citrus sinensis; type=EST; length=575bpback to top |