BQ623328
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_RHOFD (Tryptophan synthase alpha chain OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) GN=trpA PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.952e-11 Identity = 40/118 (33.90%), Postives = 65/118 (55.08%), Query Frame = 2 Query: 53 LSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSLKSAL 406 L L+ PT+ +RM+ + + G+VY VS GVTG+ A +G V+ +L I+ PV VGFGI + + G AD V++GS +++L+ E + G +KF +++AL Sbjct: 156 LDLIFLLAPTSTDERMQQVARVASGYVYYVSLKGVTGSGALDTGAVEAMLPRIRAHVQVPVGVGFGI-RDAATARTIGQVADAVVIGSKIIQLIDEQPRDQVG-PVAQKFLCEIRTAL 271
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_RHIEC (Tryptophan synthase alpha chain OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=trpA PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.952e-11 Identity = 35/91 (38.46%), Postives = 54/91 (59.34%), Query Frame = 2 Query: 53 LSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMV 325 ++ + TPTT R+ +++ + GFVY VS G+TG+ V ++ IK+ + PV VGFG+ EH +V G ADGV+VG+A+V Sbjct: 149 INFIRLATPTTDEKRLPTVLKNTSGFVYYVSMNGITGSALPDPSLVSGAVQRIKQHTELPVCVGFGVKTAEHA-KVIGGSADGVVVGTAIV 238
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_PHOPR (Tryptophan synthase alpha chain OS=Photobacterium profundum GN=trpA PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.952e-11 Identity = 39/115 (33.91%), Postives = 62/115 (53.91%), Query Frame = 2 Query: 65 LFTTPTTPTDR-MKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEG-LKELEKFAKSLKSA 403 +F P TD +K++ E G+ YL+S GVTGA ++ L+ + + + P +GFGIS+P V++ GA G I GSA+VK++ S L L +F + +K+A Sbjct: 151 IFIAPPNATDETLKSVSELGGGYTYLLSRAGVTGAETKAGKPIRHLVESLTKHNAPPALLGFGISEPAQVKEAIEAGAAGAISGSAVVKIIENNLSDHTAMLDNLGQFIRDMKAA 265
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_ECO55 (Tryptophan synthase alpha chain OS=Escherichia coli (strain 55989 / EAEC) GN=trpA PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.952e-11 Identity = 40/127 (31.50%), Postives = 67/127 (52.76%), Query Frame = 2 Query: 26 YRRKP*KIRLSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGE-AQSPEEGLKELEKFAKSLKSA 403 +R+ + ++ + P D ++ I G+ YL+S GVTGA + + L+ ++KE + P GFGIS P+ V+ GA G I GSA+VK++ + PE+ L L+ F + +K+A Sbjct: 139 FRQAALRHNVAPIFICPPNADDDLLRQIASYGRGYTYLLSRAGVTGAENRAALPLNHLVAKLKEYNAAPPLQGFGISAPDQVKAAIDAGAAGAISGSAIVKIIEQHINEPEKMLVALKVFVQPMKAA 265
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_DEIRA (Tryptophan synthase alpha chain OS=Deinococcus radiodurans GN=trpA PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.952e-11 Identity = 39/92 (42.39%), Postives = 55/92 (59.78%), Query Frame = 2 Query: 53 LSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASIS-GHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMV 325 L++ PT+ +R+K + EA GF+Y VS GVTGAR + G V +L ++ + +PV VGFG+ QQVA ADGV+VGSA + Sbjct: 158 LAVTFLIAPTSTPERVKLVAEACTGFLYAVSVTGVTGAREGAALGEVPRMLDLARQYAQRPVVVGFGVKDAATAQQVA-QVADGVVVGSAFI 248
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_ACTSZ (Tryptophan synthase alpha chain OS=Actinobacillus succinogenes (strain ATCC 55618 / 130Z) GN=trpA PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.952e-11 Identity = 39/116 (33.62%), Postives = 62/116 (53.45%), Query Frame = 2 Query: 62 VLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGAR-ASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGE-AQSPEEGLKELEKFAKSLKSA 403 V P + + +EG+ YLVS GVT A S + ++ TL+ +K + P+ GFGI++PE V+Q G G I GSA VK++ + + L+EL +F + +K+A Sbjct: 151 VFICPPNADEKTVAGVASHTEGYTYLVSRAGVTSAENQSHAANLDTLVERLKAHNAAPILQGFGIARPEQVKQALTLGTSGAISGSATVKIIEKNLDNHPACLQELARFTREMKAA 266
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_RHIME (Tryptophan synthase alpha chain OS=Rhizobium meliloti GN=trpA PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.549e-11 Identity = 35/101 (34.65%), Postives = 56/101 (55.45%), Query Frame = 2 Query: 53 LSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPE 355 +S + TPTT R+ ++E + GFVY VS G+TG+ + + IK + PV VGFG+ +H + + G ADGV+VG+A+V + + + E Sbjct: 149 ISFIRLATPTTDDRRLPKVLENTSGFVYYVSMTGITGSALPDPSLIAGAVARIKAHTPLPVCVGFGVKTADHARAI-GASADGVVVGTAIVNQIASSLTEE 248
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_OCEIH (Tryptophan synthase alpha chain OS=Oceanobacillus iheyensis GN=trpA PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.549e-11 Identity = 39/107 (36.45%), Postives = 59/107 (55.14%), Query Frame = 2 Query: 53 LSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKEL 373 ++ + T+ DR++ I + SEGF+Y VS G TG RA L ++K+ S PV GFGIS E ++++ DGV+VGS +V+L Q E+G+ L Sbjct: 149 IAFIRLAAMTSTEDRLERIAKRSEGFLYAVSVTGTTGERAQHENDAFHFLEKLKQISHVPVLAGFGISTAERARELSA-ACDGVVVGSKIVQLF--EQGDEDGIHSL 252
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_HALHL (Tryptophan synthase alpha chain OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=trpA PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.549e-11 Identity = 40/118 (33.90%), Postives = 66/118 (55.93%), Query Frame = 2 Query: 53 LSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSLKSAL 406 + L+ P T +R++ + + GFVY V+ GVTG+ +G V + I+ + PVAVGFG+ P+ +A ADGVIVGSA+V+++GE + + + L +L+ A+ Sbjct: 148 VDLIYLVAPNTSAERVERVCSVAGGFVYAVALKGVTGSADLDAGLVGQQVAGIRRVTDLPVAVGFGVRDPQSAAALAPC-ADGVIVGSALVRMIGEHGAAADLPERLRDAVLALRRAM 264
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_ECO24 (Tryptophan synthase alpha chain OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=trpA PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.549e-11 Identity = 40/127 (31.50%), Postives = 67/127 (52.76%), Query Frame = 2 Query: 26 YRRKP*KIRLSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGE-AQSPEEGLKELEKFAKSLKSA 403 +R+ + ++ + P D ++ I G+ YL+S GVTGA + + L+ ++KE + P GFGIS P+ V+ GA G I GSA+VK++ + PE+ L L+ F + +K+A Sbjct: 139 FRQAALRHNVAPIFICPPNADDDLLRQIASYGRGYTYLLSRAGVTGAENRAALPLNHLVAKLKEYNAAPPLQGFGISAPDQVKAPIDAGAAGAISGSAIVKIIEQHINEPEKMLAALKVFVQPMKAA 265 The following BLAST results are available for this feature:
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 363
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623328 ID=BQ623328; Name=BQ623328; organism=Citrus sinensis; type=EST; length=575bpback to top |