BQ623328
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRP_COPCI (Tryptophan synthase OS=Coprinopsis cinerea GN=TRP-1 PE=3 SV=3) HSP 1 Score: 66.6254 bits (161), Expect = 9.685e-11 Identity = 41/116 (35.34%), Postives = 68/116 (58.62%), Query Frame = 2 Query: 26 YRRKP*KIRLSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQ--TLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIV-GSAMV---KLLGEAQSPE 355 +R+K LS V P+T R++ + ++ F+Y+VS +G TG+ A+++ + + T+L I+E + P+AV FG++ + VA GADGV+V GS +V K GE Q P+ Sbjct: 139 FRQKCAASNLSYVPLIAPSTTLKRIQFLASIADSFIYVVSKMGTTGSSANVAVNEELPTILSRIREYTHVPLAVEFGVATRDQFNYVADAGADGVVVIGSRIVNAIKAAGEGQVPQ 254
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_YERE8 (Tryptophan synthase alpha chain OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=trpA PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 9.685e-11 Identity = 39/115 (33.91%), Postives = 58/115 (50.43%), Query Frame = 2 Query: 62 VLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLL-GEAQSPEEGLKELEKFAKSLKSA 403 + P D ++ I G+ YL+S GVTGA + L+ ++ E + P GFGIS+PE V+ GA G I GSA+VK++ P E L +L F ++K+A Sbjct: 151 IFICPPNADDDLLREIASHGRGYTYLLSRAGVTGAENHGQLPLNHLIDKLCEYNAAPALQGFGISEPEQVKISLAAGAAGAISGSAIVKIIENNVSQPAEMLAQLANFVTNMKAA 265
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_BEII9 (Tryptophan synthase alpha chain OS=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) GN=trpA PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 9.685e-11 Identity = 42/119 (35.29%), Postives = 62/119 (52.10%), Query Frame = 2 Query: 53 LSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLL-----GEAQSPEEGLKELEKFAKSL 394 L+ + TPTT R+ A++ + GF+Y VS G+TGA V + + IK + PVAVGFG+ E + +A AD V+VGSA+V L GE ++ + +EK L Sbjct: 149 LNFIRLATPTTDAVRLPAVLANTSGFLYYVSITGITGAGVPDYSKVASAVAGIKAHTNLPVAVGFGVKTAESARTIA-CHADAVVVGSAIVDALRASLDGEGRATPACIGTVEKLVAEL 266 The following BLAST results are available for this feature:
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 363
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >BQ623328 ID=BQ623328; Name=BQ623328; organism=Citrus sinensis; type=EST; length=575bpback to top |