BQ623328
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_METBF (Tryptophan synthase alpha chain OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=trpA PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 4.796e-18 Identity = 53/118 (44.92%), Postives = 69/118 (58.47%), Query Frame = 2 Query: 53 LSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSLKSAL 406 L L+ PTT R++ I+E GF+YLVS +GVTGAR +S + LL ++ + P AVGFGIS E +V GAD VIVGSA VK++ E + E LE AK LKS + Sbjct: 147 LDLIFLIAPTTTEGRVQKILERGSGFLYLVSRLGVTGAREDVSSSTRELLSRVE--TGLPKAVGFGISTGEQAAEVRDAGADAVIVGSAFVKIIDEGKDVNE---RLEALAKELKSGI 259
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_SYMTH (Tryptophan synthase alpha chain OS=Symbiobacterium thermophilum GN=trpA PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 6.263e-18 Identity = 48/118 (40.68%), Postives = 70/118 (59.32%), Query Frame = 2 Query: 47 IRLSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSLKS 400 + L L+ F PT+P +R++ E + GF+Y VSS GVTG R + + ++ +K + PVAVGFGIS+PE V+QV AD IVGSA V+ GE E ++ + A+ LK+ Sbjct: 146 VGLDLIQFVAPTSPPERIRRAAELARGFIYAVSSTGVTGVRDRLPPQLTAMVEAVKAVTDTPVAVGFGISRPEQVRQVTA-VADAAIVGSAFVRHCGEGLPEHELVERVRILAEELKA 262
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_PYRFU (Tryptophan synthase alpha chain OS=Pyrococcus furiosus GN=trpA PE=1 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 6.263e-18 Identity = 47/96 (48.96%), Postives = 59/96 (61.46%), Query Frame = 2 Query: 53 LSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGE 340 + V P TP +R+K I + + GFVYLVS G TGAR I LLR K VAVGFG+SK EHV + GA+GV+VGSA+VK++GE Sbjct: 134 IKTVFLAAPNTPDERLKVIDDMTTGFVYLVSLYGTTGAREEIPKTAYDLLRRAKRICRNKVAVGFGVSKREHVVSLLKEGANGVVVGSALVKIIGE 229
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_METM7 (Tryptophan synthase alpha chain OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=trpA PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 6.263e-18 Identity = 49/127 (38.58%), Postives = 68/127 (53.54%), Query Frame = 2 Query: 26 YRRKP*KIRLSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSLKSAL 406 YR K + V P TP +R+K EAS F+YL+S+ G+TGAR S ++ + + + VGFGISK H + + GADGVIVGSA V ++ EE L +LE+ AK L + Sbjct: 124 YREICKKHEMGTVFLAAPNTPEERLKISDEASTEFLYLISTFGITGARESFEQMTFDFIKRARTTCKGKICVGFGISKGSHAESLIEQGADGVIVGSAFVDIIKNYGDSEEALVKLEELAKELSEGI 250
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_METMA (Tryptophan synthase alpha chain OS=Methanosarcina mazei GN=trpA PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 8.180e-18 Identity = 51/118 (43.22%), Postives = 70/118 (59.32%), Query Frame = 2 Query: 53 LSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSLKSAL 406 L L+ PTT R++ I++ GF+YLVS +GVTGAR ++G + LL + ++ P AVGFGIS E +V GADGVIVGSA V+++ E E LE A+ LKS + Sbjct: 155 LDLIFLVAPTTTEARIRKILQRGSGFIYLVSRLGVTGARDDVAGSTKELLSRV--NTDIPKAVGFGISTGEQAAEVRKAGADGVIVGSAFVRIIEEGTDVNE---RLETLARELKSGM 267
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_METVS (Tryptophan synthase alpha chain OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=trpA PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.395e-17 Identity = 47/127 (37.01%), Postives = 71/127 (55.91%), Query Frame = 2 Query: 26 YRRKP*KIRLSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSLKSAL 406 YR+ K + V + P TP +R+K EAS F+YL+S+ G+TGAR S ++ +++ + VGFGISK H + + GADGVIVGSA V ++ E + +LE+ AK L + + Sbjct: 124 YRKICKKHEMGTVFLSAPNTPEERLKMSDEASTEFLYLISTFGITGARESFEQMTFDFIKRARKTCKGKICVGFGISKGTHAESLIEQGADGVIVGSAFVDIIKTYGDSNEAITKLEELAKELHNGI 250
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_METB6 (Tryptophan synthase alpha chain OS=Methanoregula boonei (strain 6A8) GN=trpA PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 1.822e-17 Identity = 47/121 (38.84%), Postives = 73/121 (60.33%), Query Frame = 2 Query: 44 KIRLSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGE-AQSPEEGLKELEKFAKSLKSA 403 K + + T TT +RM IV + G++YLVS +GVTGAR +++ LL ++ + P+A+GFGIS PEHV GADGVIVGSA+V ++ + +P+ ++L ++ +K A Sbjct: 142 KYGIDPIFLVTQTTSNERMDTIVRHARGYLYLVSVLGVTGARKTVAPEALALLNRVRSHTDLPLAIGFGISTPEHVTTCNLAGADGVIVGSAIVDIVEKNLGNPDAMEQDLRRYVSVMKKA 262
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_BACHD (Tryptophan synthase alpha chain OS=Bacillus halodurans GN=trpA PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 1.822e-17 Identity = 52/124 (41.94%), Postives = 77/124 (62.10%), Query Frame = 2 Query: 53 LSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSP-------EEGLKELEKFAKSLKSA 403 LSL+ PT+ R++ I ++GFVY VSS+GVTG R + V L+ +K ++ PV VGFGIS+ E V+ +A ADGV+VGSA+VKL+GE + E+GL ++++F L S+ Sbjct: 144 LSLISLVAPTS-NKRIEKIAARAQGFVYCVSSLGVTGLRDELDPRVHEFLQTVKTHASVPVVVGFGISRREQVEALAE-NADGVVVGSAIVKLVGELEDELNDPEKLEDGLFKIKRFVSELISS 265
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_SOLUE (Tryptophan synthase alpha chain OS=Solibacter usitatus (strain Ellin6076) GN=trpA PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 3.108e-17 Identity = 48/115 (41.74%), Postives = 69/115 (60.00%), Query Frame = 2 Query: 53 LSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSLK 397 L V PT+ R++ + S GFVYLVS GVTG R S+S V L++ ++ ++ P+AVGFGISKPEHV ++ G + V+VGSA V+L+ + +LE F + LK Sbjct: 147 LDTVFLAAPTSTARRIELVARYSTGFVYLVSRTGVTGERESLSASVAPLIQAVRAATDLPLAVGFGISKPEHVAEL-GSQVEAVVVGSAFVRLIEQNAESAALEIQLESFTRELK 260
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_PYRKO (Tryptophan synthase alpha chain OS=Pyrococcus kodakaraensis GN=trpA PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 3.108e-17 Identity = 45/118 (38.14%), Postives = 73/118 (61.86%), Query Frame = 2 Query: 53 LSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLK----ELEKFAKSL 394 L V P TP +R++ I +AS GFVYL+S G TGAR + +R ++ +AVGFG+S+ E V+++ GADGV+VGSA+++L+ +++P E L+ EL ++++L Sbjct: 134 LKTVFLAAPNTPDERLREIDKASTGFVYLISLYGTTGARDRLPETAFEFVRRARKICNNKLAVGFGVSRREQVEELLKAGADGVVVGSALIELISRSENPVEELRRKVAELSGYSRAL 251 The following BLAST results are available for this feature:
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 363
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623328 ID=BQ623328; Name=BQ623328; organism=Citrus sinensis; type=EST; length=575bpback to top |