BQ623328
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_METMP (Tryptophan synthase alpha chain OS=Methanococcus maripaludis GN=trpA PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 3.108e-17 Identity = 47/127 (37.01%), Postives = 69/127 (54.33%), Query Frame = 2 Query: 26 YRRKP*KIRLSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSLKSAL 406 YR+ K + V P TP +R+K EAS F+YL+S+ G+TGAR + ++ + + + VGFGISK H + + GADGVIVGSA V ++ +E L +LE+ AK L + Sbjct: 124 YRKICKKHEMGTVFLAAPNTPEERLKISDEASTEFLYLISTFGITGARDTFEQMTFDFIKRARTTCKGKICVGFGISKGSHAESLIEQGADGVIVGSAFVDIIKNYGDSKEALVKLEELAKELSEGI 250
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA2_CYACA (Tryptophan synthase alpha chain OS=Cyanidium caldarium GN=trpA PE=3 SV=2) HSP 1 Score: 88.1965 bits (217), Expect = 3.108e-17 Identity = 42/117 (35.90%), Postives = 73/117 (62.39%), Query Frame = 2 Query: 53 LSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSLKSA 403 L ++ +PTTP R K + A + ++YLVS GVTG A + ++ E+K+ +T P+A+GFGI + + +Q V WGADGVI+G+A +++L E+G+ +L ++ ++K + Sbjct: 128 LHMIWLISPTTPKVRAKQLALACDDWIYLVSRTGVTGVDAHFDNQIPNMIAELKQVTTTPIALGFGIHQKQQLQLVKSWGADGVIIGTACMQIL-----LEKGVDQLTEWISAMKKS 239
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_PARDP (Tryptophan synthase alpha chain OS=Paracoccus denitrificans (strain Pd 1222) GN=trpA PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 4.060e-17 Identity = 51/117 (43.59%), Postives = 69/117 (58.97%), Query Frame = 2 Query: 53 LSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSLKSA 403 L+ + TPTT R+ A+V + GFVY VS G+TG A+ + V + I+ ++ PV VGFGIS PE Q VAG ADG +VGSA+VKL+GE + E L + A+ SA Sbjct: 150 LNFIRLATPTTDDRRLPAVVRNTSGFVYYVSVTGITGGPAANAAEVAPEVARIRAAAKLPVVVGFGISTPEAAQAVAG-VADGCVVGSAIVKLIGEGRPVPEILSFVADLAQGAHSA 265
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_GEOMG (Tryptophan synthase alpha chain OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=trpA PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 5.302e-17 Identity = 52/118 (44.07%), Postives = 68/118 (57.63%), Query Frame = 2 Query: 53 LSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSLKSAL 406 + ++ TPT+ R++ + + GF+Y VS GVTG R+ I V + IKE S PVAVGFGI+ PE +VA ADGV+VGSA+VKL E EE L F SLK A+ Sbjct: 147 IDVIFLLTPTSDETRIRTVTNRARGFIYYVSVTGVTGVRSGIEASVAGNVNIIKECSKVPVAVGFGIATPEQAGEVAA-TADGVVVGSAIVKLF-EKHRGEELKGALATFVSSLKQAV 262
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_STRAW (Tryptophan synthase alpha chain OS=Streptomyces avermitilis GN=trpA PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.181e-16 Identity = 50/124 (40.32%), Postives = 69/124 (55.65%), Query Frame = 2 Query: 23 LYRRKP*KIRLSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSL 394 L+R K L+ V P++ R+ I A GFVY S +GVTG RAS+ Q L+R + ++ PV VG G+S +VAG+ ADGVIVGSA VKL+ +A+ GL+ + A L Sbjct: 147 LWREHAEKHGLATVFVVAPSSKDARLAEITAAGSGFVYAASLMGVTGTRASVGEQAQDLVRRTRATTDLPVCVGLGVSNATQAAEVAGF-ADGVIVGSAFVKLMLDAEDEAAGLEAVRALAGEL 269
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_THEPX (Tryptophan synthase alpha chain OS=Thermoanaerobacter sp. (strain X514) GN=trpA PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.543e-16 Identity = 46/121 (38.02%), Postives = 74/121 (61.16%), Query Frame = 2 Query: 44 KIRLSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSLKSAL 406 K + L+ PT+ +R+K I E +GFVY VS GVTGAR I ++ ++ + + + P A+GFGIS PE +++ + +DG+IVGSA+V+ + + + E L+E++ F SLK L Sbjct: 144 KYGIYLIPLVAPTSK-ERIKLITENGKGFVYCVSITGVTGAREDIETDIEEYMKTVSQYTNMPKAIGFGISTPEMAKKLKDF-SDGIIVGSALVERIAKGYNKSEMLQEVKSFVSSLKEVL 262
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_PSESM (Tryptophan synthase alpha chain OS=Pseudomonas syringae pv. tomato GN=trpA PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.543e-16 Identity = 43/104 (41.35%), Postives = 64/104 (61.54%), Query Frame = 2 Query: 53 LSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGL 364 + + TTPTT R+ ++E S GFVY VS GVTGA ++ + HV + ++ ++ P++VGFGI PE +A ADGV+VGSA V + A+SPE+ + Sbjct: 148 IDFIRLTTPTTDDARLPRVLERSSGFVYYVSVAGVTGAGSATTEHVTEAIARLRRHTSLPISVGFGIRTPEQAAAIARL-ADGVVVGSAFVDKIATAESPEQAI 250
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_NATPD (Tryptophan synthase alpha chain OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=trpA PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.543e-16 Identity = 50/120 (41.67%), Postives = 68/120 (56.67%), Query Frame = 2 Query: 53 LSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGE----AQSPEEGLKELEKFAKSLKS 400 L LV PTT DR++ ++E G+VY+ + +GVTGAR +S L + E+ P AVGFGIS E + V GADGVIVGSA+V ++ E +P+ LE A+ LKS Sbjct: 144 LDLVFIVAPTTAGDRLERMMEQVSGYVYVQARLGVTGAREDVSDRTAETLARL-EAYDVPKAVGFGISSGEQAEAVVAAGADGVIVGSALVDIVAEGHENGDAPDVVADRLESLARELKS 262
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_RHOS4 (Tryptophan synthase alpha chain OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=trpA PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.015e-16 Identity = 48/117 (41.03%), Postives = 70/117 (59.83%), Query Frame = 2 Query: 53 LSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSLKSA 403 L+ + TPTT + R+ +++ + GFVY VS G+TGA A+ + V + IK ++ PV VGFGI+ PE Q +AG ADG +VGSA+VKL+GE + E L + A +A Sbjct: 148 LNFIRLATPTTDSRRLPKVLQNTSGFVYYVSITGITGAAAAQAADVAPEVARIKAATDLPVIVGFGITTPEAAQDLAGI-ADGCVVGSAIVKLVGEGRPVAEVLDRVAALAAGAHAA 263
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_RHOS1 (Tryptophan synthase alpha chain OS=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) GN=trpA PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.015e-16 Identity = 48/117 (41.03%), Postives = 70/117 (59.83%), Query Frame = 2 Query: 53 LSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSLKSA 403 L+ + TPTT + R+ +++ + GFVY VS G+TGA A+ + V + IK ++ PV VGFGI+ PE Q +AG ADG +VGSA+VKL+GE + E L + A +A Sbjct: 148 LNFIRLATPTTDSRRLPKVLQNTSGFVYYVSITGITGAAAAQAADVAPEVARIKAATDLPVIVGFGITTPEAAQDLAGI-ADGCVVGSAIVKLVGEGRPVAEVLDRVAALAAGAHAA 263 The following BLAST results are available for this feature:
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 363
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623328 ID=BQ623328; Name=BQ623328; organism=Citrus sinensis; type=EST; length=575bpback to top |